ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:070:085

Extra

PDB:
ATOM 1 O3' G A 69 27.997 154.451 21.862 1.00 55.09 O
ATOM 2 P A A 70 26.929 155.608 21.547 1.00 56.82 P
ATOM 3 OP1 A A 70 25.597 155.182 22.049 1.00 55.61 O
ATOM 4 OP2 A A 70 27.083 155.998 20.121 1.00 59.04 O
ATOM 5 O5' A A 70 27.425 156.833 22.436 1.00 55.95 O
ATOM 6 C5' A A 70 27.627 156.685 23.851 1.00 53.85 C
ATOM 7 C4' A A 70 28.057 157.998 24.465 1.00 53.58 C
ATOM 8 O4' A A 70 29.326 158.416 23.889 1.00 53.29 O
ATOM 9 C3' A A 70 27.108 159.175 24.280 1.00 51.59 C
ATOM 10 O3' A A 70 27.243 160.039 25.395 1.00 53.54 O
ATOM 11 C2' A A 70 27.705 159.889 23.076 1.00 52.38 C
ATOM 12 O2' A A 70 27.368 161.258 23.028 1.00 53.36 O
ATOM 13 C1' A A 70 29.194 159.719 23.357 1.00 52.97 C
ATOM 14 N9 A A 70 30.073 159.832 22.196 1.00 53.02 N
ATOM 15 C8 A A 70 29.915 159.283 20.951 1.00 53.43 C
ATOM 16 N7 A A 70 30.901 159.543 20.130 1.00 53.22 N
ATOM 17 C5 A A 70 31.764 160.324 20.881 1.00 53.19 C
ATOM 18 C6 A A 70 32.998 160.917 20.583 1.00 53.02 C
ATOM 19 N6 A A 70 33.595 160.814 19.395 1.00 52.81 N
ATOM 20 N1 A A 70 33.607 161.629 21.557 1.00 52.99 N
ATOM 21 C2 A A 70 33.001 161.736 22.744 1.00 54.20 C
ATOM 22 N3 A A 70 31.837 161.227 23.145 1.00 55.34 N
ATOM 23 C4 A A 70 31.263 160.519 22.154 1.00 54.21 C
ATOM 24 P G A 71 26.367 159.789 26.710 1.00 56.37 P
ATOM 25 OP1 G A 71 25.144 159.031 26.319 1.00 55.94 O
ATOM 26 OP2 G A 71 26.239 161.082 27.420 1.00 52.60 O
ATOM 27 O5' G A 71 27.270 158.804 27.577 1.00 57.40 O
TER

ATOM 1 O3' G B 84 36.729 165.298 19.310 1.00 64.56 O
ATOM 2 P A B 85 36.415 166.517 18.310 1.00 65.04 P
ATOM 3 OP1 A B 85 37.726 167.105 17.923 1.00 63.52 O
ATOM 4 OP2 A B 85 35.369 167.383 18.921 1.00 63.49 O
ATOM 5 O5' A B 85 35.750 165.804 17.051 1.00 67.73 O
ATOM 6 C5' A B 85 34.577 164.974 17.203 1.00 69.58 C
ATOM 7 C4' A B 85 33.716 165.065 15.968 1.00 71.15 C
ATOM 8 O4' A B 85 32.604 164.133 16.071 1.00 71.20 O
ATOM 9 C3' A B 85 33.101 166.437 15.723 1.00 72.90 C
ATOM 10 O3' A B 85 33.010 166.686 14.325 1.00 75.66 O
ATOM 11 C2' A B 85 31.705 166.288 16.314 1.00 72.84 C
ATOM 12 O2' A B 85 30.783 167.196 15.738 1.00 72.11 O
ATOM 13 C1' A B 85 31.384 164.837 15.954 1.00 72.64 C
ATOM 14 N9 A B 85 30.390 164.197 16.821 1.00 73.66 N
ATOM 15 C8 A B 85 29.189 163.658 16.431 1.00 73.79 C
ATOM 16 N7 A B 85 28.484 163.161 17.417 1.00 73.45 N
ATOM 17 C5 A B 85 29.274 163.383 18.536 1.00 74.71 C
ATOM 18 C6 A B 85 29.083 163.093 19.900 1.00 74.90 C
ATOM 19 N6 A B 85 27.995 162.486 20.381 1.00 74.83 N
ATOM 20 N1 A B 85 30.060 163.453 20.762 1.00 74.12 N
ATOM 21 C2 A B 85 31.153 164.058 20.275 1.00 73.87 C
ATOM 22 N3 A B 85 31.448 164.382 19.017 1.00 74.54 N
ATOM 23 C4 A B 85 30.455 164.017 18.185 1.00 74.61 C
ATOM 24 P A B 86 33.748 167.968 13.696 1.00 76.55 P
ATOM 25 OP1 A B 86 33.722 169.072 14.700 1.00 75.70 O
ATOM 26 OP2 A B 86 33.143 168.181 12.354 1.00 77.89 O
ATOM 27 O5' A B 86 35.256 167.491 13.497 1.00 74.23 O
TER

Atoms:
OP1: (25.597,155.182,22.049)
OP2: (27.083,155.998,20.121)
C3': (27.108,159.175,24.280)
C1': (29.194,159.719,23.357)
C5': (27.627,156.685,23.851)
O4': (29.326,158.416,23.889)
C8: (29.915,159.283,20.951)
O2': (27.368,161.258,23.028)
C6: (32.998,160.917,20.583)
C5: (31.764,160.324,20.881)
C4: (31.263,160.519,22.154)
P: (26.929,155.608,21.547)
C4': (28.057,157.998,24.465)
C2': (27.705,159.889,23.076)
C2: (33.001,161.736,22.744)
N1: (33.607,161.629,21.557)
N3: (31.837,161.227,23.145)
N6: (33.595,160.814,19.395)
N7: (30.901,159.543,20.130)
N9: (30.073,159.832,22.196)
O5': (27.425,156.833,22.436)
O3': (27.243,160.039,25.395)
OP1: (37.726,167.105,17.923)
OP2: (35.369,167.383,18.921)
C3': (33.101,166.437,15.723)
C1': (31.384,164.837,15.954)
C5': (34.577,164.974,17.203)
O4': (32.604,164.133,16.071)
C8: (29.189,163.658,16.431)
O2': (30.783,167.196,15.738)
C6: (29.083,163.093,19.900)
C5: (29.274,163.383,18.536)
C4: (30.455,164.017,18.185)
P: (36.415,166.517,18.310)
C4': (33.716,165.065,15.968)
C2': (31.705,166.288,16.314)
C2: (31.153,164.058,20.275)
N1: (30.060,163.453,20.762)
N3: (31.448,164.382,19.017)
N6: (27.995,162.486,20.381)
N7: (28.484,163.161,17.417)
N9: (30.390,164.197,16.821)
O5': (35.750,165.804,17.051)
O3': (33.010,166.686,14.325)
Image (generated by PyMOL):
PyMOL image
show in jmol