ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KXK:A66:A67

Extra

PDB:
ATOM 1 O3' A A 65 -1.593 41.615 172.138 1.00 90.23 O
ATOM 2 P A A 66 -2.600 40.629 171.319 1.00 94.23 P
ATOM 3 OP1 A A 66 -2.853 39.497 172.250 1.00 93.56 O
ATOM 4 OP2 A A 66 -2.046 40.347 169.960 1.00 93.49 O
ATOM 5 O5' A A 66 -3.987 41.410 171.160 1.00 96.61 O
ATOM 6 C5' A A 66 -5.111 41.113 172.006 1.00 99.02 C
ATOM 7 C4' A A 66 -6.422 41.387 171.283 1.00100.10 C
ATOM 8 O4' A A 66 -6.434 42.762 170.806 1.00 99.41 O
ATOM 9 C3' A A 66 -6.705 40.550 170.040 1.00100.89 C
ATOM 10 O3' A A 66 -7.333 39.311 170.369 1.00102.36 O
ATOM 11 C2' A A 66 -7.665 41.445 169.272 1.00101.09 C
ATOM 12 O2' A A 66 -8.988 41.407 169.767 1.00102.94 O
ATOM 13 C1' A A 66 -7.059 42.821 169.535 1.00 99.63 C
ATOM 14 N9 A A 66 -6.042 43.129 168.535 1.00 97.52 N
ATOM 15 C8 A A 66 -4.713 42.835 168.593 1.00 97.05 C
ATOM 16 N7 A A 66 -4.040 43.221 167.539 1.00 97.20 N
ATOM 17 C5 A A 66 -4.993 43.819 166.736 1.00 96.80 C
ATOM 18 C6 A A 66 -4.913 44.440 165.482 1.00 97.37 C
ATOM 19 N6 A A 66 -3.776 44.571 164.796 1.00 97.98 N
ATOM 20 N1 A A 66 -6.052 44.929 164.948 1.00 96.82 N
ATOM 21 C2 A A 66 -7.185 44.798 165.639 1.00 96.14 C
ATOM 22 N3 A A 66 -7.385 44.240 166.829 1.00 97.27 N
ATOM 23 C4 A A 66 -6.233 43.765 167.332 1.00 97.17 C
ATOM 24 P A A 67 -7.353 38.110 169.294 1.00103.53 P
ATOM 25 OP1 A A 67 -8.132 37.006 169.910 1.00102.10 O
ATOM 26 OP2 A A 67 -5.977 37.855 168.796 1.00103.50 O
ATOM 27 O5' A A 67 -8.194 38.682 168.072 1.00104.21 O
TER

ATOM 1 O3' A B 66 -7.333 39.311 170.369 1.00102.36 O
ATOM 2 P A B 67 -7.353 38.110 169.294 1.00103.53 P
ATOM 3 OP1 A B 67 -8.132 37.006 169.910 1.00102.10 O
ATOM 4 OP2 A B 67 -5.977 37.855 168.796 1.00103.50 O
ATOM 5 O5' A B 67 -8.194 38.682 168.072 1.00104.21 O
ATOM 6 C5' A B 67 -9.605 38.723 168.136 1.00105.67 C
ATOM 7 C4' A B 67 -10.180 39.039 166.785 1.00106.14 C
ATOM 8 O4' A B 67 -9.755 40.363 166.367 1.00106.83 O
ATOM 9 C3' A B 67 -9.710 38.185 165.624 1.00106.04 C
ATOM 10 O3' A B 67 -10.340 36.919 165.514 1.00105.23 O
ATOM 11 C2' A B 67 -10.148 39.031 164.443 1.00107.25 C
ATOM 12 O2' A B 67 -11.530 38.895 164.202 1.00107.66 O
ATOM 13 C1' A B 67 -9.866 40.440 164.955 1.00108.86 C
ATOM 14 N9 A B 67 -8.656 41.011 164.356 1.00111.81 N
ATOM 15 C8 A B 67 -8.654 41.753 163.192 1.00113.45 C
ATOM 16 N7 A B 67 -7.458 42.114 162.791 1.00113.10 N
ATOM 17 C5 A B 67 -6.614 41.592 163.755 1.00112.38 C
ATOM 18 C6 A B 67 -5.229 41.636 163.889 1.00112.64 C
ATOM 19 N6 A B 67 -4.427 42.246 163.012 1.00111.83 N
ATOM 20 N1 A B 67 -4.684 41.026 164.966 1.00113.55 N
ATOM 21 C2 A B 67 -5.503 40.415 165.840 1.00113.71 C
ATOM 22 N3 A B 67 -6.832 40.304 165.817 1.00112.98 N
ATOM 23 C4 A B 67 -7.335 40.919 164.736 1.00112.24 C
ATOM 24 P A B 68 -10.090 36.052 164.182 1.00105.05 P
ATOM 25 OP1 A B 68 -8.626 35.879 164.039 1.00104.68 O
ATOM 26 OP2 A B 68 -10.840 36.697 163.084 1.00105.53 O
ATOM 27 O5' A B 68 -10.744 34.619 164.451 1.00106.05 O
TER

Atoms:
OP1: (-2.853,39.497,172.250)
OP2: (-2.046,40.347,169.960)
C3': (-6.705,40.550,170.040)
C1': (-7.059,42.821,169.535)
C5': (-5.111,41.113,172.006)
O4': (-6.434,42.762,170.806)
C8: (-4.713,42.835,168.593)
O2': (-8.988,41.407,169.767)
C6: (-4.913,44.440,165.482)
C5: (-4.993,43.819,166.736)
C4: (-6.233,43.765,167.332)
P: (-2.600,40.629,171.319)
C4': (-6.422,41.387,171.283)
C2': (-7.665,41.445,169.272)
C2: (-7.185,44.798,165.639)
N1: (-6.052,44.929,164.948)
N3: (-7.385,44.240,166.829)
N6: (-3.776,44.571,164.796)
N7: (-4.040,43.221,167.539)
N9: (-6.042,43.129,168.535)
O5': (-3.987,41.410,171.160)
O3': (-7.333,39.311,170.369)
OP1: (-8.132,37.006,169.910)
OP2: (-5.977,37.855,168.796)
C3': (-9.710,38.185,165.624)
C1': (-9.866,40.440,164.955)
C5': (-9.605,38.723,168.136)
O4': (-9.755,40.363,166.367)
C8: (-8.654,41.753,163.192)
O2': (-11.530,38.895,164.202)
C6: (-5.229,41.636,163.889)
C5: (-6.614,41.592,163.755)
C4: (-7.335,40.919,164.736)
P: (-7.353,38.110,169.294)
C4': (-10.180,39.039,166.785)
C2': (-10.148,39.031,164.443)
C2: (-5.503,40.415,165.840)
N1: (-4.684,41.026,164.966)
N3: (-6.832,40.304,165.817)
N6: (-4.427,42.246,163.012)
N7: (-7.458,42.114,162.791)
N9: (-8.656,41.011,164.356)
O5': (-8.194,38.682,168.072)
O3': (-10.340,36.919,165.514)
Image (generated by PyMOL):
PyMOL image
show in jmol