Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3HJW:D24:D28
Extra
PDB:
ATOM 1 O3' G A 23 57.049 -15.875 36.918 1.00 58.78 O
ATOM 2 P A A 24 58.304 -16.110 35.947 1.00 61.08 P
ATOM 3 OP1 A A 24 59.417 -16.665 36.748 1.00 60.77 O
ATOM 4 OP2 A A 24 58.533 -14.922 35.096 1.00 61.37 O
ATOM 5 O5' A A 24 57.715 -17.270 35.025 1.00 63.55 O
ATOM 6 C5' A A 24 56.922 -18.292 35.609 1.00 66.69 C
ATOM 7 C4' A A 24 55.817 -18.672 34.649 1.00 69.71 C
ATOM 8 O4' A A 24 55.060 -17.502 34.252 1.00 69.74 O
ATOM 9 C3' A A 24 56.302 -19.336 33.366 1.00 72.07 C
ATOM 10 O3' A A 24 55.539 -20.524 33.238 1.00 77.09 O
ATOM 11 C2' A A 24 56.019 -18.304 32.267 1.00 71.02 C
ATOM 12 O2' A A 24 55.650 -18.887 31.030 1.00 70.94 O
ATOM 13 C1' A A 24 54.839 -17.533 32.854 1.00 69.40 C
ATOM 14 N9 A A 24 54.699 -16.153 32.391 1.00 68.22 N
ATOM 15 C8 A A 24 54.966 -15.030 33.120 1.00 67.84 C
ATOM 16 N7 A A 24 54.752 -13.906 32.488 1.00 67.59 N
ATOM 17 C5 A A 24 54.310 -14.318 31.245 1.00 67.59 C
ATOM 18 C6 A A 24 53.910 -13.598 30.099 1.00 67.67 C
ATOM 19 N6 A A 24 53.906 -12.261 30.045 1.00 67.97 N
ATOM 20 N1 A A 24 53.518 -14.305 29.012 1.00 67.79 N
ATOM 21 C2 A A 24 53.529 -15.645 29.073 1.00 67.63 C
ATOM 22 N3 A A 24 53.877 -16.429 30.098 1.00 67.83 N
ATOM 23 C4 A A 24 54.264 -15.701 31.164 1.00 67.81 C
ATOM 24 P U A 25 56.122 -21.866 32.595 1.00 80.91 P
ATOM 25 OP1 U A 25 55.253 -22.972 33.061 1.00 80.69 O
ATOM 26 OP2 U A 25 57.593 -21.932 32.792 1.00 80.31 O
ATOM 27 O5' U A 25 55.798 -21.592 31.050 1.00 83.82 O
TER
ATOM 1 O3' A B 27 54.694 -11.242 25.206 1.00 63.87 O
ATOM 2 P A B 28 54.170 -9.727 25.025 1.00 59.99 P
ATOM 3 OP1 A B 28 52.702 -9.713 25.142 1.00 62.25 O
ATOM 4 OP2 A B 28 54.779 -9.149 23.818 1.00 61.82 O
ATOM 5 O5' A B 28 54.798 -8.955 26.271 1.00 57.28 O
ATOM 6 C5' A B 28 55.209 -9.671 27.427 1.00 52.95 C
ATOM 7 C4' A B 28 55.738 -8.723 28.486 1.00 49.84 C
ATOM 8 O4' A B 28 55.971 -9.446 29.722 1.00 48.94 O
ATOM 9 C3' A B 28 57.068 -8.051 28.167 1.00 48.37 C
ATOM 10 O3' A B 28 57.138 -6.854 28.921 1.00 46.63 O
ATOM 11 C2' A B 28 58.062 -9.057 28.730 1.00 47.93 C
ATOM 12 O2' A B 28 59.298 -8.465 29.048 1.00 47.97 O
ATOM 13 C1' A B 28 57.357 -9.428 30.027 1.00 48.03 C
ATOM 14 N9 A B 28 57.766 -10.711 30.595 1.00 47.75 N
ATOM 15 C8 A B 28 58.414 -10.872 31.788 1.00 48.09 C
ATOM 16 N7 A B 28 58.671 -12.121 32.095 1.00 47.67 N
ATOM 17 C5 A B 28 58.154 -12.834 31.029 1.00 47.21 C
ATOM 18 C6 A B 28 58.110 -14.218 30.758 1.00 47.14 C
ATOM 19 N6 A B 28 58.624 -15.130 31.591 1.00 47.50 N
ATOM 20 N1 A B 28 57.525 -14.622 29.605 1.00 46.98 N
ATOM 21 C2 A B 28 57.016 -13.687 28.784 1.00 47.05 C
ATOM 22 N3 A B 28 56.996 -12.358 28.936 1.00 46.61 N
ATOM 23 C4 A B 28 57.589 -11.986 30.088 1.00 47.18 C
ATOM 24 P U B 29 57.630 -5.462 28.330 1.00 43.86 P
ATOM 25 OP1 U B 29 58.605 -5.698 27.239 1.00 43.78 O
ATOM 26 OP2 U B 29 58.012 -4.641 29.499 1.00 44.24 O
ATOM 27 O5' U B 29 56.284 -4.889 27.690 1.00 42.93 O
TER
ATOM 2 P A A 24 58.304 -16.110 35.947 1.00 61.08 P
ATOM 3 OP1 A A 24 59.417 -16.665 36.748 1.00 60.77 O
ATOM 4 OP2 A A 24 58.533 -14.922 35.096 1.00 61.37 O
ATOM 5 O5' A A 24 57.715 -17.270 35.025 1.00 63.55 O
ATOM 6 C5' A A 24 56.922 -18.292 35.609 1.00 66.69 C
ATOM 7 C4' A A 24 55.817 -18.672 34.649 1.00 69.71 C
ATOM 8 O4' A A 24 55.060 -17.502 34.252 1.00 69.74 O
ATOM 9 C3' A A 24 56.302 -19.336 33.366 1.00 72.07 C
ATOM 10 O3' A A 24 55.539 -20.524 33.238 1.00 77.09 O
ATOM 11 C2' A A 24 56.019 -18.304 32.267 1.00 71.02 C
ATOM 12 O2' A A 24 55.650 -18.887 31.030 1.00 70.94 O
ATOM 13 C1' A A 24 54.839 -17.533 32.854 1.00 69.40 C
ATOM 14 N9 A A 24 54.699 -16.153 32.391 1.00 68.22 N
ATOM 15 C8 A A 24 54.966 -15.030 33.120 1.00 67.84 C
ATOM 16 N7 A A 24 54.752 -13.906 32.488 1.00 67.59 N
ATOM 17 C5 A A 24 54.310 -14.318 31.245 1.00 67.59 C
ATOM 18 C6 A A 24 53.910 -13.598 30.099 1.00 67.67 C
ATOM 19 N6 A A 24 53.906 -12.261 30.045 1.00 67.97 N
ATOM 20 N1 A A 24 53.518 -14.305 29.012 1.00 67.79 N
ATOM 21 C2 A A 24 53.529 -15.645 29.073 1.00 67.63 C
ATOM 22 N3 A A 24 53.877 -16.429 30.098 1.00 67.83 N
ATOM 23 C4 A A 24 54.264 -15.701 31.164 1.00 67.81 C
ATOM 24 P U A 25 56.122 -21.866 32.595 1.00 80.91 P
ATOM 25 OP1 U A 25 55.253 -22.972 33.061 1.00 80.69 O
ATOM 26 OP2 U A 25 57.593 -21.932 32.792 1.00 80.31 O
ATOM 27 O5' U A 25 55.798 -21.592 31.050 1.00 83.82 O
TER
ATOM 1 O3' A B 27 54.694 -11.242 25.206 1.00 63.87 O
ATOM 2 P A B 28 54.170 -9.727 25.025 1.00 59.99 P
ATOM 3 OP1 A B 28 52.702 -9.713 25.142 1.00 62.25 O
ATOM 4 OP2 A B 28 54.779 -9.149 23.818 1.00 61.82 O
ATOM 5 O5' A B 28 54.798 -8.955 26.271 1.00 57.28 O
ATOM 6 C5' A B 28 55.209 -9.671 27.427 1.00 52.95 C
ATOM 7 C4' A B 28 55.738 -8.723 28.486 1.00 49.84 C
ATOM 8 O4' A B 28 55.971 -9.446 29.722 1.00 48.94 O
ATOM 9 C3' A B 28 57.068 -8.051 28.167 1.00 48.37 C
ATOM 10 O3' A B 28 57.138 -6.854 28.921 1.00 46.63 O
ATOM 11 C2' A B 28 58.062 -9.057 28.730 1.00 47.93 C
ATOM 12 O2' A B 28 59.298 -8.465 29.048 1.00 47.97 O
ATOM 13 C1' A B 28 57.357 -9.428 30.027 1.00 48.03 C
ATOM 14 N9 A B 28 57.766 -10.711 30.595 1.00 47.75 N
ATOM 15 C8 A B 28 58.414 -10.872 31.788 1.00 48.09 C
ATOM 16 N7 A B 28 58.671 -12.121 32.095 1.00 47.67 N
ATOM 17 C5 A B 28 58.154 -12.834 31.029 1.00 47.21 C
ATOM 18 C6 A B 28 58.110 -14.218 30.758 1.00 47.14 C
ATOM 19 N6 A B 28 58.624 -15.130 31.591 1.00 47.50 N
ATOM 20 N1 A B 28 57.525 -14.622 29.605 1.00 46.98 N
ATOM 21 C2 A B 28 57.016 -13.687 28.784 1.00 47.05 C
ATOM 22 N3 A B 28 56.996 -12.358 28.936 1.00 46.61 N
ATOM 23 C4 A B 28 57.589 -11.986 30.088 1.00 47.18 C
ATOM 24 P U B 29 57.630 -5.462 28.330 1.00 43.86 P
ATOM 25 OP1 U B 29 58.605 -5.698 27.239 1.00 43.78 O
ATOM 26 OP2 U B 29 58.012 -4.641 29.499 1.00 44.24 O
ATOM 27 O5' U B 29 56.284 -4.889 27.690 1.00 42.93 O
TER
Atoms:
OP1: (59.417,-16.665,36.748)
OP2: (58.533,-14.922,35.096)
C3': (56.302,-19.336,33.366)
C1': (54.839,-17.533,32.854)
C5': (56.922,-18.292,35.609)
O4': (55.060,-17.502,34.252)
C8: (54.966,-15.030,33.120)
O2': (55.650,-18.887,31.030)
C6: (53.910,-13.598,30.099)
C5: (54.310,-14.318,31.245)
C4: (54.264,-15.701,31.164)
P: (58.304,-16.110,35.947)
C4': (55.817,-18.672,34.649)
C2': (56.019,-18.304,32.267)
C2: (53.529,-15.645,29.073)
N1: (53.518,-14.305,29.012)
N3: (53.877,-16.429,30.098)
N6: (53.906,-12.261,30.045)
N7: (54.752,-13.906,32.488)
N9: (54.699,-16.153,32.391)
O5': (57.715,-17.270,35.025)
O3': (55.539,-20.524,33.238)
OP2: (58.533,-14.922,35.096)
C3': (56.302,-19.336,33.366)
C1': (54.839,-17.533,32.854)
C5': (56.922,-18.292,35.609)
O4': (55.060,-17.502,34.252)
C8: (54.966,-15.030,33.120)
O2': (55.650,-18.887,31.030)
C6: (53.910,-13.598,30.099)
C5: (54.310,-14.318,31.245)
C4: (54.264,-15.701,31.164)
P: (58.304,-16.110,35.947)
C4': (55.817,-18.672,34.649)
C2': (56.019,-18.304,32.267)
C2: (53.529,-15.645,29.073)
N1: (53.518,-14.305,29.012)
N3: (53.877,-16.429,30.098)
N6: (53.906,-12.261,30.045)
N7: (54.752,-13.906,32.488)
N9: (54.699,-16.153,32.391)
O5': (57.715,-17.270,35.025)
O3': (55.539,-20.524,33.238)
OP1: (52.702,-9.713,25.142)
OP2: (54.779,-9.149,23.818)
C3': (57.068,-8.051,28.167)
C1': (57.357,-9.428,30.027)
C5': (55.209,-9.671,27.427)
O4': (55.971,-9.446,29.722)
C8: (58.414,-10.872,31.788)
O2': (59.298,-8.465,29.048)
C6: (58.110,-14.218,30.758)
C5: (58.154,-12.834,31.029)
C4: (57.589,-11.986,30.088)
P: (54.170,-9.727,25.025)
C4': (55.738,-8.723,28.486)
C2': (58.062,-9.057,28.730)
C2: (57.016,-13.687,28.784)
N1: (57.525,-14.622,29.605)
N3: (56.996,-12.358,28.936)
N6: (58.624,-15.130,31.591)
N7: (58.671,-12.121,32.095)
N9: (57.766,-10.711,30.595)
O5': (54.798,-8.955,26.271)
O3': (57.138,-6.854,28.921)
OP2: (54.779,-9.149,23.818)
C3': (57.068,-8.051,28.167)
C1': (57.357,-9.428,30.027)
C5': (55.209,-9.671,27.427)
O4': (55.971,-9.446,29.722)
C8: (58.414,-10.872,31.788)
O2': (59.298,-8.465,29.048)
C6: (58.110,-14.218,30.758)
C5: (58.154,-12.834,31.029)
C4: (57.589,-11.986,30.088)
P: (54.170,-9.727,25.025)
C4': (55.738,-8.723,28.486)
C2': (58.062,-9.057,28.730)
C2: (57.016,-13.687,28.784)
N1: (57.525,-14.622,29.605)
N3: (56.996,-12.358,28.936)
N6: (58.624,-15.130,31.591)
N7: (58.671,-12.121,32.095)
N9: (57.766,-10.711,30.595)
O5': (54.798,-8.955,26.271)
O3': (57.138,-6.854,28.921)
Image (generated by PyMOL):