Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0366:0398
Extra
PDB:
ATOM 1 O3' C A 365 92.028 101.432 5.325 1.00 55.32 O
ATOM 2 P A A 366 92.104 100.887 6.836 1.00 55.44 P
ATOM 3 OP1 A A 366 92.833 101.935 7.590 1.00 55.07 O
ATOM 4 OP2 A A 366 92.604 99.485 6.854 1.00 54.47 O
ATOM 5 O5' A A 366 90.586 100.866 7.315 1.00 51.80 O
ATOM 6 C5' A A 366 89.849 102.092 7.463 1.00 52.33 C
ATOM 7 C4' A A 366 88.430 101.799 7.886 1.00 52.49 C
ATOM 8 O4' A A 366 87.726 101.112 6.816 1.00 53.06 O
ATOM 9 C3' A A 366 88.304 100.878 9.089 1.00 51.56 C
ATOM 10 O3' A A 366 88.445 101.619 10.297 1.00 50.83 O
ATOM 11 C2' A A 366 86.913 100.286 8.897 1.00 51.89 C
ATOM 12 O2' A A 366 85.881 101.154 9.312 1.00 51.30 O
ATOM 13 C1' A A 366 86.859 100.133 7.372 1.00 52.59 C
ATOM 14 N9 A A 366 87.310 98.814 6.922 1.00 53.13 N
ATOM 15 C8 A A 366 88.601 98.396 6.680 1.00 53.36 C
ATOM 16 N7 A A 366 88.689 97.142 6.307 1.00 52.51 N
ATOM 17 C5 A A 366 87.373 96.705 6.299 1.00 52.75 C
ATOM 18 C6 A A 366 86.798 95.463 5.999 1.00 53.91 C
ATOM 19 N6 A A 366 87.509 94.391 5.636 1.00 53.75 N
ATOM 20 N1 A A 366 85.451 95.355 6.088 1.00 53.38 N
ATOM 21 C2 A A 366 84.746 96.432 6.458 1.00 52.78 C
ATOM 22 N3 A A 366 85.173 97.653 6.769 1.00 52.74 N
ATOM 23 C4 A A 366 86.512 97.724 6.669 1.00 52.53 C
ATOM 24 P G A 367 88.790 100.860 11.672 1.00 51.26 P
ATOM 25 OP1 G A 367 90.038 100.059 11.500 1.00 48.35 O
ATOM 26 OP2 G A 367 87.536 100.193 12.130 1.00 49.07 O
ATOM 27 O5' G A 367 89.121 102.052 12.680 1.00 49.93 O
TER
ATOM 1 O3' U B 397 92.466 92.206 8.549 1.00 61.67 O
ATOM 2 P A B 398 92.383 91.853 6.980 1.00 63.47 P
ATOM 3 OP1 A B 398 93.502 90.933 6.611 1.00 61.19 O
ATOM 4 OP2 A B 398 92.195 93.124 6.220 1.00 62.19 O
ATOM 5 O5' A B 398 91.009 91.054 6.892 1.00 63.97 O
ATOM 6 C5' A B 398 90.783 89.897 7.716 1.00 65.82 C
ATOM 7 C4' A B 398 89.304 89.636 7.855 1.00 66.94 C
ATOM 8 O4' A B 398 88.721 90.592 8.785 1.00 67.61 O
ATOM 9 C3' A B 398 88.500 89.749 6.561 1.00 67.68 C
ATOM 10 O3' A B 398 87.464 88.773 6.538 1.00 69.21 O
ATOM 11 C2' A B 398 87.880 91.137 6.681 1.00 67.78 C
ATOM 12 O2' A B 398 86.690 91.297 5.932 1.00 67.23 O
ATOM 13 C1' A B 398 87.595 91.189 8.178 1.00 68.55 C
ATOM 14 N9 A B 398 87.396 92.535 8.718 1.00 69.52 N
ATOM 15 C8 A B 398 88.309 93.540 8.950 1.00 69.10 C
ATOM 16 N7 A B 398 87.771 94.642 9.419 1.00 69.19 N
ATOM 17 C5 A B 398 86.416 94.341 9.507 1.00 70.05 C
ATOM 18 C6 A B 398 85.298 95.093 9.927 1.00 70.93 C
ATOM 19 N6 A B 398 85.371 96.361 10.348 1.00 71.15 N
ATOM 20 N1 A B 398 84.086 94.491 9.894 1.00 71.16 N
ATOM 21 C2 A B 398 84.010 93.223 9.460 1.00 71.04 C
ATOM 22 N3 A B 398 84.984 92.418 9.036 1.00 69.77 N
ATOM 23 C4 A B 398 86.174 93.045 9.086 1.00 69.66 C
ATOM 24 P A B 399 87.528 87.571 5.468 1.00 70.71 P
ATOM 25 OP1 A B 399 88.009 88.115 4.161 1.00 69.47 O
ATOM 26 OP2 A B 399 86.223 86.850 5.530 1.00 69.22 O
ATOM 27 O5' A B 399 88.684 86.632 6.040 1.00 68.63 O
TER
ATOM 2 P A A 366 92.104 100.887 6.836 1.00 55.44 P
ATOM 3 OP1 A A 366 92.833 101.935 7.590 1.00 55.07 O
ATOM 4 OP2 A A 366 92.604 99.485 6.854 1.00 54.47 O
ATOM 5 O5' A A 366 90.586 100.866 7.315 1.00 51.80 O
ATOM 6 C5' A A 366 89.849 102.092 7.463 1.00 52.33 C
ATOM 7 C4' A A 366 88.430 101.799 7.886 1.00 52.49 C
ATOM 8 O4' A A 366 87.726 101.112 6.816 1.00 53.06 O
ATOM 9 C3' A A 366 88.304 100.878 9.089 1.00 51.56 C
ATOM 10 O3' A A 366 88.445 101.619 10.297 1.00 50.83 O
ATOM 11 C2' A A 366 86.913 100.286 8.897 1.00 51.89 C
ATOM 12 O2' A A 366 85.881 101.154 9.312 1.00 51.30 O
ATOM 13 C1' A A 366 86.859 100.133 7.372 1.00 52.59 C
ATOM 14 N9 A A 366 87.310 98.814 6.922 1.00 53.13 N
ATOM 15 C8 A A 366 88.601 98.396 6.680 1.00 53.36 C
ATOM 16 N7 A A 366 88.689 97.142 6.307 1.00 52.51 N
ATOM 17 C5 A A 366 87.373 96.705 6.299 1.00 52.75 C
ATOM 18 C6 A A 366 86.798 95.463 5.999 1.00 53.91 C
ATOM 19 N6 A A 366 87.509 94.391 5.636 1.00 53.75 N
ATOM 20 N1 A A 366 85.451 95.355 6.088 1.00 53.38 N
ATOM 21 C2 A A 366 84.746 96.432 6.458 1.00 52.78 C
ATOM 22 N3 A A 366 85.173 97.653 6.769 1.00 52.74 N
ATOM 23 C4 A A 366 86.512 97.724 6.669 1.00 52.53 C
ATOM 24 P G A 367 88.790 100.860 11.672 1.00 51.26 P
ATOM 25 OP1 G A 367 90.038 100.059 11.500 1.00 48.35 O
ATOM 26 OP2 G A 367 87.536 100.193 12.130 1.00 49.07 O
ATOM 27 O5' G A 367 89.121 102.052 12.680 1.00 49.93 O
TER
ATOM 1 O3' U B 397 92.466 92.206 8.549 1.00 61.67 O
ATOM 2 P A B 398 92.383 91.853 6.980 1.00 63.47 P
ATOM 3 OP1 A B 398 93.502 90.933 6.611 1.00 61.19 O
ATOM 4 OP2 A B 398 92.195 93.124 6.220 1.00 62.19 O
ATOM 5 O5' A B 398 91.009 91.054 6.892 1.00 63.97 O
ATOM 6 C5' A B 398 90.783 89.897 7.716 1.00 65.82 C
ATOM 7 C4' A B 398 89.304 89.636 7.855 1.00 66.94 C
ATOM 8 O4' A B 398 88.721 90.592 8.785 1.00 67.61 O
ATOM 9 C3' A B 398 88.500 89.749 6.561 1.00 67.68 C
ATOM 10 O3' A B 398 87.464 88.773 6.538 1.00 69.21 O
ATOM 11 C2' A B 398 87.880 91.137 6.681 1.00 67.78 C
ATOM 12 O2' A B 398 86.690 91.297 5.932 1.00 67.23 O
ATOM 13 C1' A B 398 87.595 91.189 8.178 1.00 68.55 C
ATOM 14 N9 A B 398 87.396 92.535 8.718 1.00 69.52 N
ATOM 15 C8 A B 398 88.309 93.540 8.950 1.00 69.10 C
ATOM 16 N7 A B 398 87.771 94.642 9.419 1.00 69.19 N
ATOM 17 C5 A B 398 86.416 94.341 9.507 1.00 70.05 C
ATOM 18 C6 A B 398 85.298 95.093 9.927 1.00 70.93 C
ATOM 19 N6 A B 398 85.371 96.361 10.348 1.00 71.15 N
ATOM 20 N1 A B 398 84.086 94.491 9.894 1.00 71.16 N
ATOM 21 C2 A B 398 84.010 93.223 9.460 1.00 71.04 C
ATOM 22 N3 A B 398 84.984 92.418 9.036 1.00 69.77 N
ATOM 23 C4 A B 398 86.174 93.045 9.086 1.00 69.66 C
ATOM 24 P A B 399 87.528 87.571 5.468 1.00 70.71 P
ATOM 25 OP1 A B 399 88.009 88.115 4.161 1.00 69.47 O
ATOM 26 OP2 A B 399 86.223 86.850 5.530 1.00 69.22 O
ATOM 27 O5' A B 399 88.684 86.632 6.040 1.00 68.63 O
TER
Atoms:
OP1: (92.833,101.935,7.590)
OP2: (92.604,99.485,6.854)
C3': (88.304,100.878,9.089)
C1': (86.859,100.133,7.372)
C5': (89.849,102.092,7.463)
O4': (87.726,101.112,6.816)
C8: (88.601,98.396,6.680)
O2': (85.881,101.154,9.312)
C6: (86.798,95.463,5.999)
C5: (87.373,96.705,6.299)
C4: (86.512,97.724,6.669)
P: (92.104,100.887,6.836)
C4': (88.430,101.799,7.886)
C2': (86.913,100.286,8.897)
C2: (84.746,96.432,6.458)
N1: (85.451,95.355,6.088)
N3: (85.173,97.653,6.769)
N6: (87.509,94.391,5.636)
N7: (88.689,97.142,6.307)
N9: (87.310,98.814,6.922)
O5': (90.586,100.866,7.315)
O3': (88.445,101.619,10.297)
OP2: (92.604,99.485,6.854)
C3': (88.304,100.878,9.089)
C1': (86.859,100.133,7.372)
C5': (89.849,102.092,7.463)
O4': (87.726,101.112,6.816)
C8: (88.601,98.396,6.680)
O2': (85.881,101.154,9.312)
C6: (86.798,95.463,5.999)
C5: (87.373,96.705,6.299)
C4: (86.512,97.724,6.669)
P: (92.104,100.887,6.836)
C4': (88.430,101.799,7.886)
C2': (86.913,100.286,8.897)
C2: (84.746,96.432,6.458)
N1: (85.451,95.355,6.088)
N3: (85.173,97.653,6.769)
N6: (87.509,94.391,5.636)
N7: (88.689,97.142,6.307)
N9: (87.310,98.814,6.922)
O5': (90.586,100.866,7.315)
O3': (88.445,101.619,10.297)
OP1: (93.502,90.933,6.611)
OP2: (92.195,93.124,6.220)
C3': (88.500,89.749,6.561)
C1': (87.595,91.189,8.178)
C5': (90.783,89.897,7.716)
O4': (88.721,90.592,8.785)
C8: (88.309,93.540,8.950)
O2': (86.690,91.297,5.932)
C6: (85.298,95.093,9.927)
C5: (86.416,94.341,9.507)
C4: (86.174,93.045,9.086)
P: (92.383,91.853,6.980)
C4': (89.304,89.636,7.855)
C2': (87.880,91.137,6.681)
C2: (84.010,93.223,9.460)
N1: (84.086,94.491,9.894)
N3: (84.984,92.418,9.036)
N6: (85.371,96.361,10.348)
N7: (87.771,94.642,9.419)
N9: (87.396,92.535,8.718)
O5': (91.009,91.054,6.892)
O3': (87.464,88.773,6.538)
OP2: (92.195,93.124,6.220)
C3': (88.500,89.749,6.561)
C1': (87.595,91.189,8.178)
C5': (90.783,89.897,7.716)
O4': (88.721,90.592,8.785)
C8: (88.309,93.540,8.950)
O2': (86.690,91.297,5.932)
C6: (85.298,95.093,9.927)
C5: (86.416,94.341,9.507)
C4: (86.174,93.045,9.086)
P: (92.383,91.853,6.980)
C4': (89.304,89.636,7.855)
C2': (87.880,91.137,6.681)
C2: (84.010,93.223,9.460)
N1: (84.086,94.491,9.894)
N3: (84.984,92.418,9.036)
N6: (85.371,96.361,10.348)
N7: (87.771,94.642,9.419)
N9: (87.396,92.535,8.718)
O5': (91.009,91.054,6.892)
O3': (87.464,88.773,6.538)
Image (generated by PyMOL):