Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2487:A2495
Extra
PDB:
ATOM 1 O3' U A2486 104.031 -49.855 67.465 1.00 72.52 O
ATOM 2 P A A2487 105.355 -49.258 66.793 1.00 64.63 P
ATOM 3 OP1 A A2487 106.239 -48.811 67.891 1.00155.78 O
ATOM 4 OP2 A A2487 104.924 -48.270 65.784 1.00144.76 O
ATOM 5 O5' A A2487 105.989 -50.536 66.080 1.00 87.27 O
ATOM 6 C5' A A2487 105.195 -51.383 65.261 1.00 92.97 C
ATOM 7 C4' A A2487 106.027 -52.360 64.463 1.00 90.56 C
ATOM 8 O4' A A2487 105.246 -52.863 63.350 1.00 96.41 O
ATOM 9 C3' A A2487 107.278 -51.804 63.802 1.00 86.54 C
ATOM 10 O3' A A2487 108.366 -51.692 64.701 1.00 90.48 O
ATOM 11 C2' A A2487 107.524 -52.798 62.672 1.00 93.17 C
ATOM 12 O2' A A2487 108.161 -53.967 63.163 1.00 95.30 O
ATOM 13 C1' A A2487 106.098 -53.170 62.268 1.00 98.49 C
ATOM 14 N9 A A2487 105.640 -52.446 61.060 1.00105.18 N
ATOM 15 C8 A A2487 105.984 -52.732 59.750 1.00108.15 C
ATOM 16 N7 A A2487 105.431 -51.950 58.841 1.00 97.36 N
ATOM 17 C5 A A2487 104.667 -51.096 59.608 1.00 93.39 C
ATOM 18 C6 A A2487 103.854 -50.044 59.231 1.00 87.84 C
ATOM 19 N6 A A2487 103.672 -49.672 57.973 1.00 83.02 N
ATOM 20 N1 A A2487 103.242 -49.390 60.223 1.00 96.49 N
ATOM 21 C2 A A2487 103.439 -49.781 61.488 1.00 91.82 C
ATOM 22 N3 A A2487 104.175 -50.757 61.977 1.00 82.03 N
ATOM 23 C4 A A2487 104.779 -51.379 60.968 1.00 94.34 C
ATOM 24 P C A2488 109.658 -50.818 64.320 1.00 77.10 P
ATOM 25 OP1 C A2488 110.848 -51.624 64.681 1.00 78.40 O
ATOM 26 OP2 C A2488 109.487 -49.490 64.937 1.00 77.29 O
ATOM 27 O5' C A2488 109.551 -50.692 62.745 1.00 92.28 O
TER
ATOM 1 O3' G B2494 98.102 -48.344 54.927 1.00 75.46 O
ATOM 2 P A B2495 97.285 -49.439 55.776 1.00 61.96 P
ATOM 3 OP1 A B2495 96.779 -50.448 54.824 1.00103.10 O
ATOM 4 OP2 A B2495 96.317 -48.701 56.608 1.00 97.93 O
ATOM 5 O5' A B2495 98.418 -50.081 56.694 1.00 73.78 O
ATOM 6 C5' A B2495 98.549 -51.488 56.840 1.00 72.57 C
ATOM 7 C4' A B2495 99.608 -52.044 55.929 1.00 62.52 C
ATOM 8 O4' A B2495 100.934 -51.724 56.428 1.00 61.57 O
ATOM 9 C3' A B2495 99.668 -53.543 55.820 1.00 62.30 C
ATOM 10 O3' A B2495 98.597 -54.112 55.106 1.00 53.24 O
ATOM 11 C2' A B2495 101.020 -53.732 55.176 1.00 70.48 C
ATOM 12 O2' A B2495 100.991 -53.307 53.829 1.00 78.25 O
ATOM 13 C1' A B2495 101.839 -52.725 55.983 1.00 78.60 C
ATOM 14 N9 A B2495 102.470 -53.390 57.147 1.00 99.97 N
ATOM 15 C8 A B2495 103.411 -54.389 56.989 1.00101.82 C
ATOM 16 N7 A B2495 103.851 -54.944 58.082 1.00 93.39 N
ATOM 17 C5 A B2495 103.125 -54.285 59.037 1.00 91.14 C
ATOM 18 C6 A B2495 103.161 -54.448 60.408 1.00 98.41 C
ATOM 19 N6 A B2495 103.969 -55.333 61.000 1.00 98.14 N
ATOM 20 N1 A B2495 102.337 -53.661 61.123 1.00100.79 N
ATOM 21 C2 A B2495 101.553 -52.797 60.466 1.00 99.02 C
ATOM 22 N3 A B2495 101.434 -52.549 59.167 1.00 88.64 N
ATOM 23 C4 A B2495 102.261 -53.342 58.499 1.00 90.27 C
ATOM 24 P C B2496 98.024 -55.545 55.558 1.00 63.53 P
ATOM 25 OP1 C B2496 96.971 -55.904 54.609 1.00 77.42 O
ATOM 26 OP2 C B2496 97.674 -55.459 57.000 1.00 60.75 O
ATOM 27 O5' C B2496 99.286 -56.505 55.358 1.00 80.50 O
TER
ATOM 2 P A A2487 105.355 -49.258 66.793 1.00 64.63 P
ATOM 3 OP1 A A2487 106.239 -48.811 67.891 1.00155.78 O
ATOM 4 OP2 A A2487 104.924 -48.270 65.784 1.00144.76 O
ATOM 5 O5' A A2487 105.989 -50.536 66.080 1.00 87.27 O
ATOM 6 C5' A A2487 105.195 -51.383 65.261 1.00 92.97 C
ATOM 7 C4' A A2487 106.027 -52.360 64.463 1.00 90.56 C
ATOM 8 O4' A A2487 105.246 -52.863 63.350 1.00 96.41 O
ATOM 9 C3' A A2487 107.278 -51.804 63.802 1.00 86.54 C
ATOM 10 O3' A A2487 108.366 -51.692 64.701 1.00 90.48 O
ATOM 11 C2' A A2487 107.524 -52.798 62.672 1.00 93.17 C
ATOM 12 O2' A A2487 108.161 -53.967 63.163 1.00 95.30 O
ATOM 13 C1' A A2487 106.098 -53.170 62.268 1.00 98.49 C
ATOM 14 N9 A A2487 105.640 -52.446 61.060 1.00105.18 N
ATOM 15 C8 A A2487 105.984 -52.732 59.750 1.00108.15 C
ATOM 16 N7 A A2487 105.431 -51.950 58.841 1.00 97.36 N
ATOM 17 C5 A A2487 104.667 -51.096 59.608 1.00 93.39 C
ATOM 18 C6 A A2487 103.854 -50.044 59.231 1.00 87.84 C
ATOM 19 N6 A A2487 103.672 -49.672 57.973 1.00 83.02 N
ATOM 20 N1 A A2487 103.242 -49.390 60.223 1.00 96.49 N
ATOM 21 C2 A A2487 103.439 -49.781 61.488 1.00 91.82 C
ATOM 22 N3 A A2487 104.175 -50.757 61.977 1.00 82.03 N
ATOM 23 C4 A A2487 104.779 -51.379 60.968 1.00 94.34 C
ATOM 24 P C A2488 109.658 -50.818 64.320 1.00 77.10 P
ATOM 25 OP1 C A2488 110.848 -51.624 64.681 1.00 78.40 O
ATOM 26 OP2 C A2488 109.487 -49.490 64.937 1.00 77.29 O
ATOM 27 O5' C A2488 109.551 -50.692 62.745 1.00 92.28 O
TER
ATOM 1 O3' G B2494 98.102 -48.344 54.927 1.00 75.46 O
ATOM 2 P A B2495 97.285 -49.439 55.776 1.00 61.96 P
ATOM 3 OP1 A B2495 96.779 -50.448 54.824 1.00103.10 O
ATOM 4 OP2 A B2495 96.317 -48.701 56.608 1.00 97.93 O
ATOM 5 O5' A B2495 98.418 -50.081 56.694 1.00 73.78 O
ATOM 6 C5' A B2495 98.549 -51.488 56.840 1.00 72.57 C
ATOM 7 C4' A B2495 99.608 -52.044 55.929 1.00 62.52 C
ATOM 8 O4' A B2495 100.934 -51.724 56.428 1.00 61.57 O
ATOM 9 C3' A B2495 99.668 -53.543 55.820 1.00 62.30 C
ATOM 10 O3' A B2495 98.597 -54.112 55.106 1.00 53.24 O
ATOM 11 C2' A B2495 101.020 -53.732 55.176 1.00 70.48 C
ATOM 12 O2' A B2495 100.991 -53.307 53.829 1.00 78.25 O
ATOM 13 C1' A B2495 101.839 -52.725 55.983 1.00 78.60 C
ATOM 14 N9 A B2495 102.470 -53.390 57.147 1.00 99.97 N
ATOM 15 C8 A B2495 103.411 -54.389 56.989 1.00101.82 C
ATOM 16 N7 A B2495 103.851 -54.944 58.082 1.00 93.39 N
ATOM 17 C5 A B2495 103.125 -54.285 59.037 1.00 91.14 C
ATOM 18 C6 A B2495 103.161 -54.448 60.408 1.00 98.41 C
ATOM 19 N6 A B2495 103.969 -55.333 61.000 1.00 98.14 N
ATOM 20 N1 A B2495 102.337 -53.661 61.123 1.00100.79 N
ATOM 21 C2 A B2495 101.553 -52.797 60.466 1.00 99.02 C
ATOM 22 N3 A B2495 101.434 -52.549 59.167 1.00 88.64 N
ATOM 23 C4 A B2495 102.261 -53.342 58.499 1.00 90.27 C
ATOM 24 P C B2496 98.024 -55.545 55.558 1.00 63.53 P
ATOM 25 OP1 C B2496 96.971 -55.904 54.609 1.00 77.42 O
ATOM 26 OP2 C B2496 97.674 -55.459 57.000 1.00 60.75 O
ATOM 27 O5' C B2496 99.286 -56.505 55.358 1.00 80.50 O
TER
Atoms:
OP1: (106.239,-48.811,67.891)
OP2: (104.924,-48.270,65.784)
C3': (107.278,-51.804,63.802)
C1': (106.098,-53.170,62.268)
C5': (105.195,-51.383,65.261)
O4': (105.246,-52.863,63.350)
C8: (105.984,-52.732,59.750)
O2': (108.161,-53.967,63.163)
C6: (103.854,-50.044,59.231)
C5: (104.667,-51.096,59.608)
C4: (104.779,-51.379,60.968)
P: (105.355,-49.258,66.793)
C4': (106.027,-52.360,64.463)
C2': (107.524,-52.798,62.672)
C2: (103.439,-49.781,61.488)
N1: (103.242,-49.390,60.223)
N3: (104.175,-50.757,61.977)
N6: (103.672,-49.672,57.973)
N7: (105.431,-51.950,58.841)
N9: (105.640,-52.446,61.060)
O5': (105.989,-50.536,66.080)
O3': (108.366,-51.692,64.701)
OP2: (104.924,-48.270,65.784)
C3': (107.278,-51.804,63.802)
C1': (106.098,-53.170,62.268)
C5': (105.195,-51.383,65.261)
O4': (105.246,-52.863,63.350)
C8: (105.984,-52.732,59.750)
O2': (108.161,-53.967,63.163)
C6: (103.854,-50.044,59.231)
C5: (104.667,-51.096,59.608)
C4: (104.779,-51.379,60.968)
P: (105.355,-49.258,66.793)
C4': (106.027,-52.360,64.463)
C2': (107.524,-52.798,62.672)
C2: (103.439,-49.781,61.488)
N1: (103.242,-49.390,60.223)
N3: (104.175,-50.757,61.977)
N6: (103.672,-49.672,57.973)
N7: (105.431,-51.950,58.841)
N9: (105.640,-52.446,61.060)
O5': (105.989,-50.536,66.080)
O3': (108.366,-51.692,64.701)
OP1: (96.779,-50.448,54.824)
OP2: (96.317,-48.701,56.608)
C3': (99.668,-53.543,55.820)
C1': (101.839,-52.725,55.983)
C5': (98.549,-51.488,56.840)
O4': (100.934,-51.724,56.428)
C8: (103.411,-54.389,56.989)
O2': (100.991,-53.307,53.829)
C6: (103.161,-54.448,60.408)
C5: (103.125,-54.285,59.037)
C4: (102.261,-53.342,58.499)
P: (97.285,-49.439,55.776)
C4': (99.608,-52.044,55.929)
C2': (101.020,-53.732,55.176)
C2: (101.553,-52.797,60.466)
N1: (102.337,-53.661,61.123)
N3: (101.434,-52.549,59.167)
N6: (103.969,-55.333,61.000)
N7: (103.851,-54.944,58.082)
N9: (102.470,-53.390,57.147)
O5': (98.418,-50.081,56.694)
O3': (98.597,-54.112,55.106)
OP2: (96.317,-48.701,56.608)
C3': (99.668,-53.543,55.820)
C1': (101.839,-52.725,55.983)
C5': (98.549,-51.488,56.840)
O4': (100.934,-51.724,56.428)
C8: (103.411,-54.389,56.989)
O2': (100.991,-53.307,53.829)
C6: (103.161,-54.448,60.408)
C5: (103.125,-54.285,59.037)
C4: (102.261,-53.342,58.499)
P: (97.285,-49.439,55.776)
C4': (99.608,-52.044,55.929)
C2': (101.020,-53.732,55.176)
C2: (101.553,-52.797,60.466)
N1: (102.337,-53.661,61.123)
N3: (101.434,-52.549,59.167)
N6: (103.969,-55.333,61.000)
N7: (103.851,-54.944,58.082)
N9: (102.470,-53.390,57.147)
O5': (98.418,-50.081,56.694)
O3': (98.597,-54.112,55.106)
Image (generated by PyMOL):