ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01191:02366

Extra

PDB:
ATOM 1 O3' A A1190 53.478 112.693 131.242 1.00 37.74 O
ATOM 2 P A A1191 52.715 112.747 129.828 1.00 37.99 P
ATOM 3 OP1 A A1191 51.415 113.423 130.072 1.00 37.80 O
ATOM 4 OP2 A A1191 52.739 111.389 129.226 1.00 37.48 O
ATOM 5 O5' A A1191 53.617 113.702 128.934 1.00 34.70 O
ATOM 6 C5' A A1191 53.892 115.031 129.361 1.00 36.82 C
ATOM 7 C4' A A1191 54.394 115.867 128.212 1.00 39.91 C
ATOM 8 O4' A A1191 55.798 115.606 127.964 1.00 38.58 O
ATOM 9 C3' A A1191 53.688 115.704 126.863 1.00 38.94 C
ATOM 10 O3' A A1191 53.308 116.977 126.381 1.00 38.07 O
ATOM 11 C2' A A1191 54.789 115.149 125.960 1.00 39.39 C
ATOM 12 O2' A A1191 54.656 115.619 124.636 1.00 44.07 O
ATOM 13 C1' A A1191 56.032 115.765 126.590 1.00 39.51 C
ATOM 14 N9 A A1191 57.309 115.131 126.258 1.00 40.00 N
ATOM 15 C8 A A1191 57.552 114.091 125.395 1.00 39.47 C
ATOM 16 N7 A A1191 58.815 113.756 125.317 1.00 39.07 N
ATOM 17 C5 A A1191 59.449 114.635 126.181 1.00 38.33 C
ATOM 18 C6 A A1191 60.792 114.792 126.545 1.00 40.00 C
ATOM 19 N6 A A1191 61.785 114.041 126.054 1.00 41.35 N
ATOM 20 N1 A A1191 61.090 115.757 127.443 1.00 40.26 N
ATOM 21 C2 A A1191 60.096 116.504 127.932 1.00 38.18 C
ATOM 22 N3 A A1191 58.799 116.453 127.664 1.00 37.22 N
ATOM 23 C4 A A1191 58.536 115.485 126.770 1.00 38.72 C
ATOM 24 P A A1192 51.764 117.269 126.065 1.00 36.59 P
ATOM 25 OP1 A A1192 51.036 117.272 127.356 1.00 36.61 O
ATOM 26 OP2 A A1192 51.332 116.351 124.977 1.00 37.82 O
ATOM 27 O5' A A1192 51.765 118.763 125.520 1.00 34.53 O
TER

ATOM 1 O3' G B2365 57.407 111.028 124.055 1.00 41.07 O
ATOM 2 P G B2366 56.606 111.209 122.682 1.00 42.33 P
ATOM 3 OP1 G B2366 55.697 112.382 122.827 1.00 42.67 O
ATOM 4 OP2 G B2366 56.049 109.882 122.307 1.00 40.44 O
ATOM 5 O5' G B2366 57.740 111.584 121.638 1.00 41.75 O
ATOM 6 C5' G B2366 58.703 112.597 121.941 1.00 41.17 C
ATOM 7 C4' G B2366 59.938 112.390 121.110 1.00 42.49 C
ATOM 8 O4' G B2366 60.452 111.057 121.383 1.00 42.86 O
ATOM 9 C3' G B2366 59.732 112.469 119.599 1.00 42.14 C
ATOM 10 O3' G B2366 60.903 113.020 119.004 1.00 43.91 O
ATOM 11 C2' G B2366 59.562 111.001 119.211 1.00 41.29 C
ATOM 12 O2' G B2366 59.912 110.711 117.872 1.00 40.82 O
ATOM 13 C1' G B2366 60.527 110.320 120.179 1.00 42.00 C
ATOM 14 N9 G B2366 60.201 108.924 120.461 1.00 41.47 N
ATOM 15 C8 G B2366 58.980 108.412 120.828 1.00 40.09 C
ATOM 16 N7 G B2366 58.986 107.114 120.956 1.00 40.11 N
ATOM 17 C5 G B2366 60.292 106.744 120.667 1.00 41.39 C
ATOM 18 C6 G B2366 60.898 105.455 120.625 1.00 42.75 C
ATOM 19 O6 G B2366 60.379 104.348 120.838 1.00 43.66 O
ATOM 20 N1 G B2366 62.249 105.534 120.291 1.00 41.91 N
ATOM 21 C2 G B2366 62.932 106.698 120.034 1.00 42.22 C
ATOM 22 N2 G B2366 64.238 106.565 119.744 1.00 39.16 N
ATOM 23 N3 G B2366 62.377 107.905 120.061 1.00 42.97 N
ATOM 24 C4 G B2366 61.062 107.851 120.380 1.00 41.93 C
ATOM 25 P C B2367 60.999 114.604 118.734 1.00 45.53 P
ATOM 26 OP1 C B2367 60.278 115.322 119.813 1.00 45.77 O
ATOM 27 OP2 C B2367 60.635 114.876 117.322 1.00 48.50 O
ATOM 28 O5' C B2367 62.564 114.879 118.855 1.00 51.37 O
TER

Atoms:
OP1: (51.415,113.423,130.072)
OP2: (52.739,111.389,129.226)
C3': (53.688,115.704,126.863)
C1': (56.032,115.765,126.590)
C5': (53.892,115.031,129.361)
O4': (55.798,115.606,127.964)
C8: (57.552,114.091,125.395)
O2': (54.656,115.619,124.636)
C6: (60.792,114.792,126.545)
C5: (59.449,114.635,126.181)
C4: (58.536,115.485,126.770)
P: (52.715,112.747,129.828)
C4': (54.394,115.867,128.212)
C2': (54.789,115.149,125.960)
C2: (60.096,116.504,127.932)
N1: (61.090,115.757,127.443)
N3: (58.799,116.453,127.664)
N6: (61.785,114.041,126.054)
N7: (58.815,113.756,125.317)
N9: (57.309,115.131,126.258)
O5': (53.617,113.702,128.934)
O3': (53.308,116.977,126.381)
OP1: (55.697,112.382,122.827)
OP2: (56.049,109.882,122.307)
C3': (59.732,112.469,119.599)
C1': (60.527,110.320,120.179)
C5': (58.703,112.597,121.941)
O6: (60.379,104.348,120.838)
O4': (60.452,111.057,121.383)
C8: (58.980,108.412,120.828)
C2: (62.932,106.698,120.034)
C6: (60.898,105.455,120.625)
C5: (60.292,106.744,120.667)
C4: (61.062,107.851,120.380)
P: (56.606,111.209,122.682)
C4': (59.938,112.390,121.110)
C2': (59.562,111.001,119.211)
O2': (59.912,110.711,117.872)
N1: (62.249,105.534,120.291)
N2: (64.238,106.565,119.744)
N3: (62.377,107.905,120.061)
N7: (58.986,107.114,120.956)
N9: (60.201,108.924,120.461)
O5': (57.740,111.584,121.638)
O3': (60.903,113.020,119.004)
Image (generated by PyMOL):
PyMOL image
show in jmol