Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCL:0235:0250
Extra
PDB:
ATOM 1 O3' G A 234 94.168 118.073 -7.823 1.00 65.81 O
ATOM 2 P A A 235 94.703 119.113 -8.925 1.00 65.08 P
ATOM 3 OP1 A A 235 94.261 118.591 -10.243 1.00 65.86 O
ATOM 4 OP2 A A 235 96.147 119.374 -8.681 1.00 63.51 O
ATOM 5 O5' A A 235 93.876 120.440 -8.638 1.00 64.21 O
ATOM 6 C5' A A 235 92.476 120.522 -8.967 1.00 65.17 C
ATOM 7 C4' A A 235 91.853 121.691 -8.251 1.00 66.08 C
ATOM 8 O4' A A 235 91.744 121.397 -6.828 1.00 66.68 O
ATOM 9 C3' A A 235 92.672 122.970 -8.347 1.00 65.91 C
ATOM 10 O3' A A 235 91.800 124.076 -8.253 1.00 65.58 O
ATOM 11 C2' A A 235 93.513 122.911 -7.082 1.00 66.80 C
ATOM 12 O2' A A 235 93.990 124.176 -6.676 1.00 66.99 O
ATOM 13 C1' A A 235 92.494 122.344 -6.094 1.00 66.96 C
ATOM 14 N9 A A 235 93.093 121.670 -4.947 1.00 66.93 N
ATOM 15 C8 A A 235 93.842 120.521 -4.932 1.00 67.61 C
ATOM 16 N7 A A 235 94.256 120.177 -3.738 1.00 68.21 N
ATOM 17 C5 A A 235 93.737 121.163 -2.910 1.00 67.47 C
ATOM 18 C6 A A 235 93.816 121.372 -1.526 1.00 66.17 C
ATOM 19 N6 A A 235 94.466 120.561 -0.691 1.00 66.41 N
ATOM 20 N1 A A 235 93.195 122.454 -1.019 1.00 65.95 N
ATOM 21 C2 A A 235 92.535 123.263 -1.853 1.00 67.69 C
ATOM 22 N3 A A 235 92.383 123.171 -3.169 1.00 68.04 N
ATOM 23 C4 A A 235 93.017 122.086 -3.642 1.00 67.49 C
ATOM 24 P A A 236 91.392 124.869 -9.575 1.00 66.56 P
ATOM 25 OP1 A A 236 92.481 124.591 -10.551 1.00 65.86 O
ATOM 26 OP2 A A 236 91.063 126.275 -9.206 1.00 66.54 O
ATOM 27 O5' A A 236 90.061 124.146 -10.071 1.00 63.99 O
TER
ATOM 1 O3' A B 249 95.672 123.511 3.648 1.00 52.17 O
ATOM 2 P A B 250 97.240 123.499 3.995 1.00 53.93 P
ATOM 3 OP1 A B 250 97.390 123.403 5.463 1.00 53.56 O
ATOM 4 OP2 A B 250 97.896 124.610 3.278 1.00 55.29 O
ATOM 5 O5' A B 250 97.753 122.120 3.384 1.00 53.15 O
ATOM 6 C5' A B 250 97.357 121.707 2.067 1.00 52.86 C
ATOM 7 C4' A B 250 98.096 120.453 1.668 1.00 54.20 C
ATOM 8 O4' A B 250 97.648 120.062 0.343 1.00 55.65 O
ATOM 9 C3' A B 250 99.611 120.585 1.567 1.00 53.70 C
ATOM 10 O3' A B 250 100.211 119.315 1.839 1.00 50.85 O
ATOM 11 C2' A B 250 99.798 120.954 0.097 1.00 55.04 C
ATOM 12 O2' A B 250 101.078 120.649 -0.419 1.00 55.52 O
ATOM 13 C1' A B 250 98.739 120.074 -0.553 1.00 56.32 C
ATOM 14 N9 A B 250 98.253 120.535 -1.852 1.00 57.94 N
ATOM 15 C8 A B 250 98.379 119.894 -3.059 1.00 58.32 C
ATOM 16 N7 A B 250 97.781 120.508 -4.049 1.00 59.46 N
ATOM 17 C5 A B 250 97.237 121.639 -3.459 1.00 59.42 C
ATOM 18 C6 A B 250 96.466 122.696 -3.975 1.00 60.03 C
ATOM 19 N6 A B 250 96.097 122.786 -5.256 1.00 59.23 N
ATOM 20 N1 A B 250 96.082 123.670 -3.119 1.00 60.79 N
ATOM 21 C2 A B 250 96.457 123.578 -1.835 1.00 60.80 C
ATOM 22 N3 A B 250 97.181 122.633 -1.231 1.00 60.10 N
ATOM 23 C4 A B 250 97.539 121.680 -2.109 1.00 59.05 C
ATOM 24 P U B 251 101.293 119.173 3.026 1.00 51.19 P
ATOM 25 OP1 U B 251 102.056 120.444 3.158 1.00 49.32 O
ATOM 26 OP2 U B 251 102.025 117.892 2.872 1.00 48.59 O
ATOM 27 O5' U B 251 100.399 119.063 4.331 1.00 51.92 O
TER
ATOM 2 P A A 235 94.703 119.113 -8.925 1.00 65.08 P
ATOM 3 OP1 A A 235 94.261 118.591 -10.243 1.00 65.86 O
ATOM 4 OP2 A A 235 96.147 119.374 -8.681 1.00 63.51 O
ATOM 5 O5' A A 235 93.876 120.440 -8.638 1.00 64.21 O
ATOM 6 C5' A A 235 92.476 120.522 -8.967 1.00 65.17 C
ATOM 7 C4' A A 235 91.853 121.691 -8.251 1.00 66.08 C
ATOM 8 O4' A A 235 91.744 121.397 -6.828 1.00 66.68 O
ATOM 9 C3' A A 235 92.672 122.970 -8.347 1.00 65.91 C
ATOM 10 O3' A A 235 91.800 124.076 -8.253 1.00 65.58 O
ATOM 11 C2' A A 235 93.513 122.911 -7.082 1.00 66.80 C
ATOM 12 O2' A A 235 93.990 124.176 -6.676 1.00 66.99 O
ATOM 13 C1' A A 235 92.494 122.344 -6.094 1.00 66.96 C
ATOM 14 N9 A A 235 93.093 121.670 -4.947 1.00 66.93 N
ATOM 15 C8 A A 235 93.842 120.521 -4.932 1.00 67.61 C
ATOM 16 N7 A A 235 94.256 120.177 -3.738 1.00 68.21 N
ATOM 17 C5 A A 235 93.737 121.163 -2.910 1.00 67.47 C
ATOM 18 C6 A A 235 93.816 121.372 -1.526 1.00 66.17 C
ATOM 19 N6 A A 235 94.466 120.561 -0.691 1.00 66.41 N
ATOM 20 N1 A A 235 93.195 122.454 -1.019 1.00 65.95 N
ATOM 21 C2 A A 235 92.535 123.263 -1.853 1.00 67.69 C
ATOM 22 N3 A A 235 92.383 123.171 -3.169 1.00 68.04 N
ATOM 23 C4 A A 235 93.017 122.086 -3.642 1.00 67.49 C
ATOM 24 P A A 236 91.392 124.869 -9.575 1.00 66.56 P
ATOM 25 OP1 A A 236 92.481 124.591 -10.551 1.00 65.86 O
ATOM 26 OP2 A A 236 91.063 126.275 -9.206 1.00 66.54 O
ATOM 27 O5' A A 236 90.061 124.146 -10.071 1.00 63.99 O
TER
ATOM 1 O3' A B 249 95.672 123.511 3.648 1.00 52.17 O
ATOM 2 P A B 250 97.240 123.499 3.995 1.00 53.93 P
ATOM 3 OP1 A B 250 97.390 123.403 5.463 1.00 53.56 O
ATOM 4 OP2 A B 250 97.896 124.610 3.278 1.00 55.29 O
ATOM 5 O5' A B 250 97.753 122.120 3.384 1.00 53.15 O
ATOM 6 C5' A B 250 97.357 121.707 2.067 1.00 52.86 C
ATOM 7 C4' A B 250 98.096 120.453 1.668 1.00 54.20 C
ATOM 8 O4' A B 250 97.648 120.062 0.343 1.00 55.65 O
ATOM 9 C3' A B 250 99.611 120.585 1.567 1.00 53.70 C
ATOM 10 O3' A B 250 100.211 119.315 1.839 1.00 50.85 O
ATOM 11 C2' A B 250 99.798 120.954 0.097 1.00 55.04 C
ATOM 12 O2' A B 250 101.078 120.649 -0.419 1.00 55.52 O
ATOM 13 C1' A B 250 98.739 120.074 -0.553 1.00 56.32 C
ATOM 14 N9 A B 250 98.253 120.535 -1.852 1.00 57.94 N
ATOM 15 C8 A B 250 98.379 119.894 -3.059 1.00 58.32 C
ATOM 16 N7 A B 250 97.781 120.508 -4.049 1.00 59.46 N
ATOM 17 C5 A B 250 97.237 121.639 -3.459 1.00 59.42 C
ATOM 18 C6 A B 250 96.466 122.696 -3.975 1.00 60.03 C
ATOM 19 N6 A B 250 96.097 122.786 -5.256 1.00 59.23 N
ATOM 20 N1 A B 250 96.082 123.670 -3.119 1.00 60.79 N
ATOM 21 C2 A B 250 96.457 123.578 -1.835 1.00 60.80 C
ATOM 22 N3 A B 250 97.181 122.633 -1.231 1.00 60.10 N
ATOM 23 C4 A B 250 97.539 121.680 -2.109 1.00 59.05 C
ATOM 24 P U B 251 101.293 119.173 3.026 1.00 51.19 P
ATOM 25 OP1 U B 251 102.056 120.444 3.158 1.00 49.32 O
ATOM 26 OP2 U B 251 102.025 117.892 2.872 1.00 48.59 O
ATOM 27 O5' U B 251 100.399 119.063 4.331 1.00 51.92 O
TER
Atoms:
OP1: (94.261,118.591,-10.243)
OP2: (96.147,119.374,-8.681)
C3': (92.672,122.970,-8.347)
C1': (92.494,122.344,-6.094)
C5': (92.476,120.522,-8.967)
O4': (91.744,121.397,-6.828)
C8: (93.842,120.521,-4.932)
O2': (93.990,124.176,-6.676)
C6: (93.816,121.372,-1.526)
C5: (93.737,121.163,-2.910)
C4: (93.017,122.086,-3.642)
P: (94.703,119.113,-8.925)
C4': (91.853,121.691,-8.251)
C2': (93.513,122.911,-7.082)
C2: (92.535,123.263,-1.853)
N1: (93.195,122.454,-1.019)
N3: (92.383,123.171,-3.169)
N6: (94.466,120.561,-0.691)
N7: (94.256,120.177,-3.738)
N9: (93.093,121.670,-4.947)
O5': (93.876,120.440,-8.638)
O3': (91.800,124.076,-8.253)
OP2: (96.147,119.374,-8.681)
C3': (92.672,122.970,-8.347)
C1': (92.494,122.344,-6.094)
C5': (92.476,120.522,-8.967)
O4': (91.744,121.397,-6.828)
C8: (93.842,120.521,-4.932)
O2': (93.990,124.176,-6.676)
C6: (93.816,121.372,-1.526)
C5: (93.737,121.163,-2.910)
C4: (93.017,122.086,-3.642)
P: (94.703,119.113,-8.925)
C4': (91.853,121.691,-8.251)
C2': (93.513,122.911,-7.082)
C2: (92.535,123.263,-1.853)
N1: (93.195,122.454,-1.019)
N3: (92.383,123.171,-3.169)
N6: (94.466,120.561,-0.691)
N7: (94.256,120.177,-3.738)
N9: (93.093,121.670,-4.947)
O5': (93.876,120.440,-8.638)
O3': (91.800,124.076,-8.253)
OP1: (97.390,123.403,5.463)
OP2: (97.896,124.610,3.278)
C3': (99.611,120.585,1.567)
C1': (98.739,120.074,-0.553)
C5': (97.357,121.707,2.067)
O4': (97.648,120.062,0.343)
C8: (98.379,119.894,-3.059)
O2': (101.078,120.649,-0.419)
C6: (96.466,122.696,-3.975)
C5: (97.237,121.639,-3.459)
C4: (97.539,121.680,-2.109)
P: (97.240,123.499,3.995)
C4': (98.096,120.453,1.668)
C2': (99.798,120.954,0.097)
C2: (96.457,123.578,-1.835)
N1: (96.082,123.670,-3.119)
N3: (97.181,122.633,-1.231)
N6: (96.097,122.786,-5.256)
N7: (97.781,120.508,-4.049)
N9: (98.253,120.535,-1.852)
O5': (97.753,122.120,3.384)
O3': (100.211,119.315,1.839)
OP2: (97.896,124.610,3.278)
C3': (99.611,120.585,1.567)
C1': (98.739,120.074,-0.553)
C5': (97.357,121.707,2.067)
O4': (97.648,120.062,0.343)
C8: (98.379,119.894,-3.059)
O2': (101.078,120.649,-0.419)
C6: (96.466,122.696,-3.975)
C5: (97.237,121.639,-3.459)
C4: (97.539,121.680,-2.109)
P: (97.240,123.499,3.995)
C4': (98.096,120.453,1.668)
C2': (99.798,120.954,0.097)
C2: (96.457,123.578,-1.835)
N1: (96.082,123.670,-3.119)
N3: (97.181,122.633,-1.231)
N6: (96.097,122.786,-5.256)
N7: (97.781,120.508,-4.049)
N9: (98.253,120.535,-1.852)
O5': (97.753,122.120,3.384)
O3': (100.211,119.315,1.839)
Image (generated by PyMOL):