Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CPW:0235:0250
Extra
PDB:
ATOM 1 O3' G A 234 93.520 117.356 -8.034 1.00 71.19 O
ATOM 2 P A A 235 94.022 118.344 -9.194 1.00 69.81 P
ATOM 3 OP1 A A 235 93.517 117.797 -10.482 1.00 69.43 O
ATOM 4 OP2 A A 235 95.476 118.566 -9.011 1.00 67.91 O
ATOM 5 O5' A A 235 93.246 119.701 -8.895 1.00 68.74 O
ATOM 6 C5' A A 235 91.842 119.836 -9.200 1.00 68.02 C
ATOM 7 C4' A A 235 91.258 120.990 -8.422 1.00 68.35 C
ATOM 8 O4' A A 235 91.152 120.628 -7.015 1.00 68.36 O
ATOM 9 C3' A A 235 92.096 122.264 -8.480 1.00 67.44 C
ATOM 10 O3' A A 235 91.237 123.399 -8.448 1.00 67.83 O
ATOM 11 C2' A A 235 92.889 122.201 -7.179 1.00 67.70 C
ATOM 12 O2' A A 235 93.323 123.464 -6.715 1.00 66.57 O
ATOM 13 C1' A A 235 91.869 121.559 -6.236 1.00 67.79 C
ATOM 14 N9 A A 235 92.453 120.865 -5.088 1.00 66.54 N
ATOM 15 C8 A A 235 93.150 119.685 -5.063 1.00 66.69 C
ATOM 16 N7 A A 235 93.571 119.346 -3.870 1.00 66.72 N
ATOM 17 C5 A A 235 93.115 120.370 -3.051 1.00 66.04 C
ATOM 18 C6 A A 235 93.235 120.607 -1.669 1.00 65.18 C
ATOM 19 N6 A A 235 93.885 119.797 -0.826 1.00 63.86 N
ATOM 20 N1 A A 235 92.657 121.721 -1.174 1.00 64.60 N
ATOM 21 C2 A A 235 92.006 122.531 -2.010 1.00 64.50 C
ATOM 22 N3 A A 235 91.826 122.419 -3.320 1.00 66.09 N
ATOM 23 C4 A A 235 92.415 121.305 -3.787 1.00 66.31 C
ATOM 24 P A A 236 90.751 124.071 -9.820 1.00 68.13 P
ATOM 25 OP1 A A 236 91.831 123.834 -10.817 1.00 68.79 O
ATOM 26 OP2 A A 236 90.291 125.456 -9.538 1.00 67.11 O
ATOM 27 O5' A A 236 89.485 123.211 -10.259 1.00 65.79 O
TER
ATOM 1 O3' A B 249 94.929 122.691 3.437 1.00 55.16 O
ATOM 2 P A B 250 96.513 122.622 3.722 1.00 55.96 P
ATOM 3 OP1 A B 250 96.712 122.517 5.177 1.00 57.61 O
ATOM 4 OP2 A B 250 97.192 123.706 2.977 1.00 58.56 O
ATOM 5 O5' A B 250 96.977 121.226 3.114 1.00 57.73 O
ATOM 6 C5' A B 250 96.631 120.840 1.773 1.00 56.85 C
ATOM 7 C4' A B 250 97.416 119.610 1.363 1.00 57.75 C
ATOM 8 O4' A B 250 97.000 119.226 0.028 1.00 58.39 O
ATOM 9 C3' A B 250 98.927 119.802 1.302 1.00 56.95 C
ATOM 10 O3' A B 250 99.537 118.534 1.568 1.00 55.99 O
ATOM 11 C2' A B 250 99.147 120.172 -0.165 1.00 58.30 C
ATOM 12 O2' A B 250 100.442 119.887 -0.648 1.00 59.92 O
ATOM 13 C1' A B 250 98.101 119.298 -0.854 1.00 59.22 C
ATOM 14 N9 A B 250 97.619 119.781 -2.151 1.00 60.46 N
ATOM 15 C8 A B 250 97.809 119.175 -3.369 1.00 60.17 C
ATOM 16 N7 A B 250 97.230 119.798 -4.366 1.00 60.13 N
ATOM 17 C5 A B 250 96.621 120.893 -3.769 1.00 59.89 C
ATOM 18 C6 A B 250 95.835 121.942 -4.289 1.00 59.98 C
ATOM 19 N6 A B 250 95.509 122.059 -5.579 1.00 58.85 N
ATOM 20 N1 A B 250 95.386 122.877 -3.424 1.00 60.51 N
ATOM 21 C2 A B 250 95.708 122.760 -2.132 1.00 60.93 C
ATOM 22 N3 A B 250 96.434 121.821 -1.523 1.00 61.44 N
ATOM 23 C4 A B 250 96.865 120.905 -2.407 1.00 60.20 C
ATOM 24 P U B 251 100.612 118.369 2.755 1.00 56.47 P
ATOM 25 OP1 U B 251 101.458 119.588 2.843 1.00 56.28 O
ATOM 26 OP2 U B 251 101.262 117.043 2.599 1.00 54.73 O
ATOM 27 O5' U B 251 99.711 118.317 4.065 1.00 57.00 O
TER
ATOM 2 P A A 235 94.022 118.344 -9.194 1.00 69.81 P
ATOM 3 OP1 A A 235 93.517 117.797 -10.482 1.00 69.43 O
ATOM 4 OP2 A A 235 95.476 118.566 -9.011 1.00 67.91 O
ATOM 5 O5' A A 235 93.246 119.701 -8.895 1.00 68.74 O
ATOM 6 C5' A A 235 91.842 119.836 -9.200 1.00 68.02 C
ATOM 7 C4' A A 235 91.258 120.990 -8.422 1.00 68.35 C
ATOM 8 O4' A A 235 91.152 120.628 -7.015 1.00 68.36 O
ATOM 9 C3' A A 235 92.096 122.264 -8.480 1.00 67.44 C
ATOM 10 O3' A A 235 91.237 123.399 -8.448 1.00 67.83 O
ATOM 11 C2' A A 235 92.889 122.201 -7.179 1.00 67.70 C
ATOM 12 O2' A A 235 93.323 123.464 -6.715 1.00 66.57 O
ATOM 13 C1' A A 235 91.869 121.559 -6.236 1.00 67.79 C
ATOM 14 N9 A A 235 92.453 120.865 -5.088 1.00 66.54 N
ATOM 15 C8 A A 235 93.150 119.685 -5.063 1.00 66.69 C
ATOM 16 N7 A A 235 93.571 119.346 -3.870 1.00 66.72 N
ATOM 17 C5 A A 235 93.115 120.370 -3.051 1.00 66.04 C
ATOM 18 C6 A A 235 93.235 120.607 -1.669 1.00 65.18 C
ATOM 19 N6 A A 235 93.885 119.797 -0.826 1.00 63.86 N
ATOM 20 N1 A A 235 92.657 121.721 -1.174 1.00 64.60 N
ATOM 21 C2 A A 235 92.006 122.531 -2.010 1.00 64.50 C
ATOM 22 N3 A A 235 91.826 122.419 -3.320 1.00 66.09 N
ATOM 23 C4 A A 235 92.415 121.305 -3.787 1.00 66.31 C
ATOM 24 P A A 236 90.751 124.071 -9.820 1.00 68.13 P
ATOM 25 OP1 A A 236 91.831 123.834 -10.817 1.00 68.79 O
ATOM 26 OP2 A A 236 90.291 125.456 -9.538 1.00 67.11 O
ATOM 27 O5' A A 236 89.485 123.211 -10.259 1.00 65.79 O
TER
ATOM 1 O3' A B 249 94.929 122.691 3.437 1.00 55.16 O
ATOM 2 P A B 250 96.513 122.622 3.722 1.00 55.96 P
ATOM 3 OP1 A B 250 96.712 122.517 5.177 1.00 57.61 O
ATOM 4 OP2 A B 250 97.192 123.706 2.977 1.00 58.56 O
ATOM 5 O5' A B 250 96.977 121.226 3.114 1.00 57.73 O
ATOM 6 C5' A B 250 96.631 120.840 1.773 1.00 56.85 C
ATOM 7 C4' A B 250 97.416 119.610 1.363 1.00 57.75 C
ATOM 8 O4' A B 250 97.000 119.226 0.028 1.00 58.39 O
ATOM 9 C3' A B 250 98.927 119.802 1.302 1.00 56.95 C
ATOM 10 O3' A B 250 99.537 118.534 1.568 1.00 55.99 O
ATOM 11 C2' A B 250 99.147 120.172 -0.165 1.00 58.30 C
ATOM 12 O2' A B 250 100.442 119.887 -0.648 1.00 59.92 O
ATOM 13 C1' A B 250 98.101 119.298 -0.854 1.00 59.22 C
ATOM 14 N9 A B 250 97.619 119.781 -2.151 1.00 60.46 N
ATOM 15 C8 A B 250 97.809 119.175 -3.369 1.00 60.17 C
ATOM 16 N7 A B 250 97.230 119.798 -4.366 1.00 60.13 N
ATOM 17 C5 A B 250 96.621 120.893 -3.769 1.00 59.89 C
ATOM 18 C6 A B 250 95.835 121.942 -4.289 1.00 59.98 C
ATOM 19 N6 A B 250 95.509 122.059 -5.579 1.00 58.85 N
ATOM 20 N1 A B 250 95.386 122.877 -3.424 1.00 60.51 N
ATOM 21 C2 A B 250 95.708 122.760 -2.132 1.00 60.93 C
ATOM 22 N3 A B 250 96.434 121.821 -1.523 1.00 61.44 N
ATOM 23 C4 A B 250 96.865 120.905 -2.407 1.00 60.20 C
ATOM 24 P U B 251 100.612 118.369 2.755 1.00 56.47 P
ATOM 25 OP1 U B 251 101.458 119.588 2.843 1.00 56.28 O
ATOM 26 OP2 U B 251 101.262 117.043 2.599 1.00 54.73 O
ATOM 27 O5' U B 251 99.711 118.317 4.065 1.00 57.00 O
TER
Atoms:
OP1: (93.517,117.797,-10.482)
OP2: (95.476,118.566,-9.011)
C3': (92.096,122.264,-8.480)
C1': (91.869,121.559,-6.236)
C5': (91.842,119.836,-9.200)
O4': (91.152,120.628,-7.015)
C8: (93.150,119.685,-5.063)
O2': (93.323,123.464,-6.715)
C6: (93.235,120.607,-1.669)
C5: (93.115,120.370,-3.051)
C4: (92.415,121.305,-3.787)
P: (94.022,118.344,-9.194)
C4': (91.258,120.990,-8.422)
C2': (92.889,122.201,-7.179)
C2: (92.006,122.531,-2.010)
N1: (92.657,121.721,-1.174)
N3: (91.826,122.419,-3.320)
N6: (93.885,119.797,-0.826)
N7: (93.571,119.346,-3.870)
N9: (92.453,120.865,-5.088)
O5': (93.246,119.701,-8.895)
O3': (91.237,123.399,-8.448)
OP2: (95.476,118.566,-9.011)
C3': (92.096,122.264,-8.480)
C1': (91.869,121.559,-6.236)
C5': (91.842,119.836,-9.200)
O4': (91.152,120.628,-7.015)
C8: (93.150,119.685,-5.063)
O2': (93.323,123.464,-6.715)
C6: (93.235,120.607,-1.669)
C5: (93.115,120.370,-3.051)
C4: (92.415,121.305,-3.787)
P: (94.022,118.344,-9.194)
C4': (91.258,120.990,-8.422)
C2': (92.889,122.201,-7.179)
C2: (92.006,122.531,-2.010)
N1: (92.657,121.721,-1.174)
N3: (91.826,122.419,-3.320)
N6: (93.885,119.797,-0.826)
N7: (93.571,119.346,-3.870)
N9: (92.453,120.865,-5.088)
O5': (93.246,119.701,-8.895)
O3': (91.237,123.399,-8.448)
OP1: (96.712,122.517,5.177)
OP2: (97.192,123.706,2.977)
C3': (98.927,119.802,1.302)
C1': (98.101,119.298,-0.854)
C5': (96.631,120.840,1.773)
O4': (97.000,119.226,0.028)
C8: (97.809,119.175,-3.369)
O2': (100.442,119.887,-0.648)
C6: (95.835,121.942,-4.289)
C5: (96.621,120.893,-3.769)
C4: (96.865,120.905,-2.407)
P: (96.513,122.622,3.722)
C4': (97.416,119.610,1.363)
C2': (99.147,120.172,-0.165)
C2: (95.708,122.760,-2.132)
N1: (95.386,122.877,-3.424)
N3: (96.434,121.821,-1.523)
N6: (95.509,122.059,-5.579)
N7: (97.230,119.798,-4.366)
N9: (97.619,119.781,-2.151)
O5': (96.977,121.226,3.114)
O3': (99.537,118.534,1.568)
OP2: (97.192,123.706,2.977)
C3': (98.927,119.802,1.302)
C1': (98.101,119.298,-0.854)
C5': (96.631,120.840,1.773)
O4': (97.000,119.226,0.028)
C8: (97.809,119.175,-3.369)
O2': (100.442,119.887,-0.648)
C6: (95.835,121.942,-4.289)
C5: (96.621,120.893,-3.769)
C4: (96.865,120.905,-2.407)
P: (96.513,122.622,3.722)
C4': (97.416,119.610,1.363)
C2': (99.147,120.172,-0.165)
C2: (95.708,122.760,-2.132)
N1: (95.386,122.877,-3.424)
N3: (96.434,121.821,-1.523)
N6: (95.509,122.059,-5.579)
N7: (97.230,119.798,-4.366)
N9: (97.619,119.781,-2.151)
O5': (96.977,121.226,3.114)
O3': (99.537,118.534,1.568)
Image (generated by PyMOL):