Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:Q47:R47
Extra
PDB:
ATOM 1 O3' G A 46 13.355 -25.194 47.411 1.00 48.70 O
ATOM 2 P A A 47 13.153 -24.451 48.818 1.00 49.31 P
ATOM 3 OP1 A A 47 13.651 -23.066 48.665 1.00 49.61 O
ATOM 4 OP2 A A 47 13.703 -25.308 49.892 1.00 48.62 O
ATOM 5 O5' A A 47 11.564 -24.373 48.967 1.00 49.81 O
ATOM 6 C5' A A 47 10.776 -23.674 48.000 1.00 50.84 C
ATOM 7 C4' A A 47 9.315 -24.055 48.136 1.00 51.94 C
ATOM 8 O4' A A 47 9.114 -25.452 47.798 1.00 51.59 O
ATOM 9 C3' A A 47 8.772 -23.915 49.549 1.00 53.02 C
ATOM 10 O3' A A 47 8.374 -22.571 49.743 1.00 55.86 O
ATOM 11 C2' A A 47 7.614 -24.913 49.547 1.00 52.02 C
ATOM 12 O2' A A 47 6.453 -24.430 48.901 1.00 51.59 O
ATOM 13 C1' A A 47 8.205 -26.045 48.712 1.00 50.93 C
ATOM 14 N9 A A 47 8.883 -27.095 49.478 1.00 49.33 N
ATOM 15 C8 A A 47 10.224 -27.215 49.726 1.00 48.77 C
ATOM 16 N7 A A 47 10.546 -28.271 50.434 1.00 48.38 N
ATOM 17 C5 A A 47 9.331 -28.894 50.667 1.00 48.04 C
ATOM 18 C6 A A 47 8.979 -30.070 51.364 1.00 47.36 C
ATOM 19 N6 A A 47 9.868 -30.856 51.974 1.00 47.28 N
ATOM 20 N1 A A 47 7.675 -30.415 51.410 1.00 47.17 N
ATOM 21 C2 A A 47 6.777 -29.630 50.800 1.00 47.55 C
ATOM 22 N3 A A 47 6.986 -28.502 50.115 1.00 48.02 N
ATOM 23 C4 A A 47 8.295 -28.183 50.084 1.00 48.51 C
ATOM 24 P U A 48 8.091 -21.978 51.198 1.00 58.02 P
ATOM 25 OP1 U A 48 8.379 -20.525 51.143 1.00 58.48 O
ATOM 26 OP2 U A 48 8.764 -22.817 52.214 1.00 57.88 O
ATOM 27 O5' U A 48 6.510 -22.181 51.327 1.00 59.63 O
TER
ATOM 1 O3' G B 46 13.178 -31.351 57.220 1.00 51.54 O
ATOM 2 P A B 47 13.127 -31.979 55.750 1.00 51.88 P
ATOM 3 OP1 A B 47 13.833 -33.276 55.793 1.00 52.04 O
ATOM 4 OP2 A B 47 13.582 -30.950 54.789 1.00 51.99 O
ATOM 5 O5' A B 47 11.563 -32.241 55.514 1.00 52.38 O
ATOM 6 C5' A B 47 10.767 -32.969 56.448 1.00 53.19 C
ATOM 7 C4' A B 47 9.287 -32.669 56.264 1.00 54.04 C
ATOM 8 O4' A B 47 8.997 -31.295 56.622 1.00 53.43 O
ATOM 9 C3' A B 47 8.763 -32.826 54.842 1.00 55.30 C
ATOM 10 O3' A B 47 8.372 -34.180 54.635 1.00 58.16 O
ATOM 11 C2' A B 47 7.574 -31.866 54.824 1.00 54.41 C
ATOM 12 O2' A B 47 6.403 -32.417 55.392 1.00 54.59 O
ATOM 13 C1' A B 47 8.054 -30.734 55.725 1.00 52.85 C
ATOM 14 N9 A B 47 8.660 -29.610 55.008 1.00 50.86 N
ATOM 15 C8 A B 47 9.996 -29.387 54.821 1.00 50.31 C
ATOM 16 N7 A B 47 10.265 -28.300 54.142 1.00 49.88 N
ATOM 17 C5 A B 47 9.019 -27.764 53.869 1.00 49.30 C
ATOM 18 C6 A B 47 8.616 -26.600 53.177 1.00 48.32 C
ATOM 19 N6 A B 47 9.483 -25.751 52.624 1.00 47.68 N
ATOM 20 N1 A B 47 7.291 -26.347 53.075 1.00 47.91 N
ATOM 21 C2 A B 47 6.426 -27.206 53.632 1.00 48.21 C
ATOM 22 N3 A B 47 6.690 -28.330 54.307 1.00 49.05 N
ATOM 23 C4 A B 47 8.014 -28.558 54.394 1.00 49.67 C
ATOM 24 P U B 48 8.572 -34.921 53.228 1.00 60.50 P
ATOM 25 OP1 U B 48 8.890 -36.338 53.514 1.00 60.67 O
ATOM 26 OP2 U B 48 9.489 -34.121 52.385 1.00 60.33 O
ATOM 27 O5' U B 48 7.103 -34.881 52.593 1.00 61.89 O
TER
ATOM 2 P A A 47 13.153 -24.451 48.818 1.00 49.31 P
ATOM 3 OP1 A A 47 13.651 -23.066 48.665 1.00 49.61 O
ATOM 4 OP2 A A 47 13.703 -25.308 49.892 1.00 48.62 O
ATOM 5 O5' A A 47 11.564 -24.373 48.967 1.00 49.81 O
ATOM 6 C5' A A 47 10.776 -23.674 48.000 1.00 50.84 C
ATOM 7 C4' A A 47 9.315 -24.055 48.136 1.00 51.94 C
ATOM 8 O4' A A 47 9.114 -25.452 47.798 1.00 51.59 O
ATOM 9 C3' A A 47 8.772 -23.915 49.549 1.00 53.02 C
ATOM 10 O3' A A 47 8.374 -22.571 49.743 1.00 55.86 O
ATOM 11 C2' A A 47 7.614 -24.913 49.547 1.00 52.02 C
ATOM 12 O2' A A 47 6.453 -24.430 48.901 1.00 51.59 O
ATOM 13 C1' A A 47 8.205 -26.045 48.712 1.00 50.93 C
ATOM 14 N9 A A 47 8.883 -27.095 49.478 1.00 49.33 N
ATOM 15 C8 A A 47 10.224 -27.215 49.726 1.00 48.77 C
ATOM 16 N7 A A 47 10.546 -28.271 50.434 1.00 48.38 N
ATOM 17 C5 A A 47 9.331 -28.894 50.667 1.00 48.04 C
ATOM 18 C6 A A 47 8.979 -30.070 51.364 1.00 47.36 C
ATOM 19 N6 A A 47 9.868 -30.856 51.974 1.00 47.28 N
ATOM 20 N1 A A 47 7.675 -30.415 51.410 1.00 47.17 N
ATOM 21 C2 A A 47 6.777 -29.630 50.800 1.00 47.55 C
ATOM 22 N3 A A 47 6.986 -28.502 50.115 1.00 48.02 N
ATOM 23 C4 A A 47 8.295 -28.183 50.084 1.00 48.51 C
ATOM 24 P U A 48 8.091 -21.978 51.198 1.00 58.02 P
ATOM 25 OP1 U A 48 8.379 -20.525 51.143 1.00 58.48 O
ATOM 26 OP2 U A 48 8.764 -22.817 52.214 1.00 57.88 O
ATOM 27 O5' U A 48 6.510 -22.181 51.327 1.00 59.63 O
TER
ATOM 1 O3' G B 46 13.178 -31.351 57.220 1.00 51.54 O
ATOM 2 P A B 47 13.127 -31.979 55.750 1.00 51.88 P
ATOM 3 OP1 A B 47 13.833 -33.276 55.793 1.00 52.04 O
ATOM 4 OP2 A B 47 13.582 -30.950 54.789 1.00 51.99 O
ATOM 5 O5' A B 47 11.563 -32.241 55.514 1.00 52.38 O
ATOM 6 C5' A B 47 10.767 -32.969 56.448 1.00 53.19 C
ATOM 7 C4' A B 47 9.287 -32.669 56.264 1.00 54.04 C
ATOM 8 O4' A B 47 8.997 -31.295 56.622 1.00 53.43 O
ATOM 9 C3' A B 47 8.763 -32.826 54.842 1.00 55.30 C
ATOM 10 O3' A B 47 8.372 -34.180 54.635 1.00 58.16 O
ATOM 11 C2' A B 47 7.574 -31.866 54.824 1.00 54.41 C
ATOM 12 O2' A B 47 6.403 -32.417 55.392 1.00 54.59 O
ATOM 13 C1' A B 47 8.054 -30.734 55.725 1.00 52.85 C
ATOM 14 N9 A B 47 8.660 -29.610 55.008 1.00 50.86 N
ATOM 15 C8 A B 47 9.996 -29.387 54.821 1.00 50.31 C
ATOM 16 N7 A B 47 10.265 -28.300 54.142 1.00 49.88 N
ATOM 17 C5 A B 47 9.019 -27.764 53.869 1.00 49.30 C
ATOM 18 C6 A B 47 8.616 -26.600 53.177 1.00 48.32 C
ATOM 19 N6 A B 47 9.483 -25.751 52.624 1.00 47.68 N
ATOM 20 N1 A B 47 7.291 -26.347 53.075 1.00 47.91 N
ATOM 21 C2 A B 47 6.426 -27.206 53.632 1.00 48.21 C
ATOM 22 N3 A B 47 6.690 -28.330 54.307 1.00 49.05 N
ATOM 23 C4 A B 47 8.014 -28.558 54.394 1.00 49.67 C
ATOM 24 P U B 48 8.572 -34.921 53.228 1.00 60.50 P
ATOM 25 OP1 U B 48 8.890 -36.338 53.514 1.00 60.67 O
ATOM 26 OP2 U B 48 9.489 -34.121 52.385 1.00 60.33 O
ATOM 27 O5' U B 48 7.103 -34.881 52.593 1.00 61.89 O
TER
Atoms:
OP1: (13.651,-23.066,48.665)
OP2: (13.703,-25.308,49.892)
C3': (8.772,-23.915,49.549)
C1': (8.205,-26.045,48.712)
C5': (10.776,-23.674,48.000)
O4': (9.114,-25.452,47.798)
C8: (10.224,-27.215,49.726)
O2': (6.453,-24.430,48.901)
C6: (8.979,-30.070,51.364)
C5: (9.331,-28.894,50.667)
C4: (8.295,-28.183,50.084)
P: (13.153,-24.451,48.818)
C4': (9.315,-24.055,48.136)
C2': (7.614,-24.913,49.547)
C2: (6.777,-29.630,50.800)
N1: (7.675,-30.415,51.410)
N3: (6.986,-28.502,50.115)
N6: (9.868,-30.856,51.974)
N7: (10.546,-28.271,50.434)
N9: (8.883,-27.095,49.478)
O5': (11.564,-24.373,48.967)
O3': (8.374,-22.571,49.743)
OP2: (13.703,-25.308,49.892)
C3': (8.772,-23.915,49.549)
C1': (8.205,-26.045,48.712)
C5': (10.776,-23.674,48.000)
O4': (9.114,-25.452,47.798)
C8: (10.224,-27.215,49.726)
O2': (6.453,-24.430,48.901)
C6: (8.979,-30.070,51.364)
C5: (9.331,-28.894,50.667)
C4: (8.295,-28.183,50.084)
P: (13.153,-24.451,48.818)
C4': (9.315,-24.055,48.136)
C2': (7.614,-24.913,49.547)
C2: (6.777,-29.630,50.800)
N1: (7.675,-30.415,51.410)
N3: (6.986,-28.502,50.115)
N6: (9.868,-30.856,51.974)
N7: (10.546,-28.271,50.434)
N9: (8.883,-27.095,49.478)
O5': (11.564,-24.373,48.967)
O3': (8.374,-22.571,49.743)
OP1: (13.833,-33.276,55.793)
OP2: (13.582,-30.950,54.789)
C3': (8.763,-32.826,54.842)
C1': (8.054,-30.734,55.725)
C5': (10.767,-32.969,56.448)
O4': (8.997,-31.295,56.622)
C8: (9.996,-29.387,54.821)
O2': (6.403,-32.417,55.392)
C6: (8.616,-26.600,53.177)
C5: (9.019,-27.764,53.869)
C4: (8.014,-28.558,54.394)
P: (13.127,-31.979,55.750)
C4': (9.287,-32.669,56.264)
C2': (7.574,-31.866,54.824)
C2: (6.426,-27.206,53.632)
N1: (7.291,-26.347,53.075)
N3: (6.690,-28.330,54.307)
N6: (9.483,-25.751,52.624)
N7: (10.265,-28.300,54.142)
N9: (8.660,-29.610,55.008)
O5': (11.563,-32.241,55.514)
O3': (8.372,-34.180,54.635)
OP2: (13.582,-30.950,54.789)
C3': (8.763,-32.826,54.842)
C1': (8.054,-30.734,55.725)
C5': (10.767,-32.969,56.448)
O4': (8.997,-31.295,56.622)
C8: (9.996,-29.387,54.821)
O2': (6.403,-32.417,55.392)
C6: (8.616,-26.600,53.177)
C5: (9.019,-27.764,53.869)
C4: (8.014,-28.558,54.394)
P: (13.127,-31.979,55.750)
C4': (9.287,-32.669,56.264)
C2': (7.574,-31.866,54.824)
C2: (6.426,-27.206,53.632)
N1: (7.291,-26.347,53.075)
N3: (6.690,-28.330,54.307)
N6: (9.483,-25.751,52.624)
N7: (10.265,-28.300,54.142)
N9: (8.660,-29.610,55.008)
O5': (11.563,-32.241,55.514)
O3': (8.372,-34.180,54.635)
Image (generated by PyMOL):