ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N78:C20:C45

Extra

PDB:
ATOM 1 O3' U A 19 -1.134 60.848 50.515 1.00 34.31 O
ATOM 2 P A A 20 -0.366 62.214 50.183 1.00 33.54 P
ATOM 3 OP1 A A 20 -0.628 63.190 51.267 1.00 35.27 O
ATOM 4 OP2 A A 20 -0.698 62.564 48.784 1.00 33.16 O
ATOM 5 O5' A A 20 1.172 61.808 50.274 1.00 37.39 O
ATOM 6 C5' A A 20 1.915 61.524 49.099 1.00 37.06 C
ATOM 7 C4' A A 20 3.300 62.130 49.184 1.00 35.40 C
ATOM 8 O4' A A 20 3.214 63.472 49.746 1.00 34.61 O
ATOM 9 C3' A A 20 4.325 61.482 50.100 1.00 34.77 C
ATOM 10 O3' A A 20 4.895 60.327 49.505 1.00 33.87 O
ATOM 11 C2' A A 20 5.361 62.593 50.157 1.00 35.03 C
ATOM 12 O2' A A 20 6.031 62.737 48.920 1.00 32.03 O
ATOM 13 C1' A A 20 4.461 63.813 50.341 1.00 33.58 C
ATOM 14 N9 A A 20 4.254 64.094 51.758 1.00 32.31 N
ATOM 15 C8 A A 20 3.152 63.819 52.522 1.00 32.11 C
ATOM 16 N7 A A 20 3.276 64.179 53.776 1.00 33.17 N
ATOM 17 C5 A A 20 4.547 64.731 53.843 1.00 31.70 C
ATOM 18 C6 A A 20 5.282 65.292 54.905 1.00 32.70 C
ATOM 19 N6 A A 20 4.814 65.399 56.158 1.00 30.08 N
ATOM 20 N1 A A 20 6.532 65.745 54.634 1.00 30.29 N
ATOM 21 C2 A A 20 6.994 65.637 53.379 1.00 28.92 C
ATOM 22 N3 A A 20 6.397 65.130 52.301 1.00 31.00 N
ATOM 23 C4 A A 20 5.161 64.688 52.605 1.00 32.61 C
ATOM 24 P G A 21 5.220 59.036 50.406 1.00 33.35 P
ATOM 25 OP1 G A 21 4.033 58.142 50.409 1.00 33.80 O
ATOM 26 OP2 G A 21 5.804 59.477 51.699 1.00 31.93 O
ATOM 27 O5' G A 21 6.352 58.307 49.564 1.00 31.65 O
TER

ATOM 1 O3' A B 44 6.736 60.491 61.630 1.00 34.91 O
ATOM 2 P A B 45 5.517 61.166 60.818 1.00 35.60 P
ATOM 3 OP1 A B 45 4.457 61.464 61.819 1.00 36.73 O
ATOM 4 OP2 A B 45 5.196 60.320 59.632 1.00 35.50 O
ATOM 5 O5' A B 45 6.111 62.541 60.278 1.00 34.15 O
ATOM 6 C5' A B 45 6.818 63.413 61.148 1.00 32.84 C
ATOM 7 C4' A B 45 7.448 64.537 60.363 1.00 33.37 C
ATOM 8 O4' A B 45 8.367 63.974 59.389 1.00 31.69 O
ATOM 9 C3' A B 45 6.497 65.391 59.538 1.00 30.82 C
ATOM 10 O3' A B 45 5.933 66.425 60.345 1.00 32.70 O
ATOM 11 C2' A B 45 7.434 65.961 58.479 1.00 30.71 C
ATOM 12 O2' A B 45 8.187 67.062 58.958 1.00 27.61 O
ATOM 13 C1' A B 45 8.363 64.769 58.219 1.00 30.76 C
ATOM 14 N9 A B 45 7.949 63.922 57.101 1.00 29.42 N
ATOM 15 C8 A B 45 6.849 63.106 57.012 1.00 29.80 C
ATOM 16 N7 A B 45 6.748 62.478 55.867 1.00 28.84 N
ATOM 17 C5 A B 45 7.859 62.904 55.156 1.00 27.13 C
ATOM 18 C6 A B 45 8.335 62.595 53.870 1.00 27.01 C
ATOM 19 N6 A B 45 7.733 61.739 53.038 1.00 25.12 N
ATOM 20 N1 A B 45 9.473 63.201 53.463 1.00 26.39 N
ATOM 21 C2 A B 45 10.086 64.044 54.299 1.00 25.98 C
ATOM 22 N3 A B 45 9.745 64.406 55.531 1.00 27.33 N
ATOM 23 C4 A B 45 8.605 63.794 55.904 1.00 29.11 C
ATOM 24 P C B 46 4.369 66.786 60.213 1.00 34.50 P
ATOM 25 OP1 C B 46 4.030 67.740 61.296 1.00 35.66 O
ATOM 26 OP2 C B 46 3.625 65.508 60.104 1.00 34.43 O
ATOM 27 O5' C B 46 4.251 67.522 58.799 1.00 35.86 O
TER

Atoms:
OP1: (-0.628,63.190,51.267)
OP2: (-0.698,62.564,48.784)
C3': (4.325,61.482,50.100)
C1': (4.461,63.813,50.341)
C5': (1.915,61.524,49.099)
O4': (3.214,63.472,49.746)
C8: (3.152,63.819,52.522)
O2': (6.031,62.737,48.920)
C6: (5.282,65.292,54.905)
C5: (4.547,64.731,53.843)
C4: (5.161,64.688,52.605)
P: (-0.366,62.214,50.183)
C4': (3.300,62.130,49.184)
C2': (5.361,62.593,50.157)
C2: (6.994,65.637,53.379)
N1: (6.532,65.745,54.634)
N3: (6.397,65.130,52.301)
N6: (4.814,65.399,56.158)
N7: (3.276,64.179,53.776)
N9: (4.254,64.094,51.758)
O5': (1.172,61.808,50.274)
O3': (4.895,60.327,49.505)
OP1: (4.457,61.464,61.819)
OP2: (5.196,60.320,59.632)
C3': (6.497,65.391,59.538)
C1': (8.363,64.769,58.219)
C5': (6.818,63.413,61.148)
O4': (8.367,63.974,59.389)
C8: (6.849,63.106,57.012)
O2': (8.187,67.062,58.958)
C6: (8.335,62.595,53.870)
C5: (7.859,62.904,55.156)
C4: (8.605,63.794,55.904)
P: (5.517,61.166,60.818)
C4': (7.448,64.537,60.363)
C2': (7.434,65.961,58.479)
C2: (10.086,64.044,54.299)
N1: (9.473,63.201,53.463)
N3: (9.745,64.406,55.531)
N6: (7.733,61.739,53.038)
N7: (6.748,62.478,55.867)
N9: (7.949,63.922,57.101)
O5': (6.111,62.541,60.278)
O3': (5.933,66.425,60.345)
Image (generated by PyMOL):
PyMOL image
show in jmol