Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0235:0250
Extra
PDB:
ATOM 1 O3' G A 234 94.015 118.111 -7.731 1.00 71.84 O
ATOM 2 P A A 235 94.509 119.151 -8.849 1.00 68.99 P
ATOM 3 OP1 A A 235 94.058 118.616 -10.163 1.00 69.70 O
ATOM 4 OP2 A A 235 95.954 119.412 -8.616 1.00 66.68 O
ATOM 5 O5' A A 235 93.688 120.474 -8.530 1.00 66.65 O
ATOM 6 C5' A A 235 92.285 120.573 -8.841 1.00 66.64 C
ATOM 7 C4' A A 235 91.698 121.770 -8.138 1.00 67.63 C
ATOM 8 O4' A A 235 91.624 121.495 -6.710 1.00 66.96 O
ATOM 9 C3' A A 235 92.546 123.032 -8.277 1.00 67.61 C
ATOM 10 O3' A A 235 91.717 124.181 -8.188 1.00 68.66 O
ATOM 11 C2' A A 235 93.424 122.957 -7.036 1.00 67.44 C
ATOM 12 O2' A A 235 93.976 124.198 -6.650 1.00 67.05 O
ATOM 13 C1' A A 235 92.421 122.429 -6.012 1.00 67.52 C
ATOM 14 N9 A A 235 93.023 121.761 -4.861 1.00 68.05 N
ATOM 15 C8 A A 235 93.806 120.633 -4.836 1.00 68.45 C
ATOM 16 N7 A A 235 94.209 120.297 -3.636 1.00 68.10 N
ATOM 17 C5 A A 235 93.649 121.265 -2.813 1.00 67.48 C
ATOM 18 C6 A A 235 93.701 121.470 -1.429 1.00 66.31 C
ATOM 19 N6 A A 235 94.372 120.681 -0.592 1.00 65.47 N
ATOM 20 N1 A A 235 93.034 122.528 -0.926 1.00 66.84 N
ATOM 21 C2 A A 235 92.362 123.321 -1.766 1.00 67.76 C
ATOM 22 N3 A A 235 92.236 123.233 -3.084 1.00 68.10 N
ATOM 23 C4 A A 235 92.913 122.170 -3.553 1.00 67.86 C
ATOM 24 P A A 236 91.199 124.892 -9.523 1.00 68.97 P
ATOM 25 OP1 A A 236 92.257 124.738 -10.556 1.00 71.53 O
ATOM 26 OP2 A A 236 90.715 126.245 -9.151 1.00 68.99 O
ATOM 27 O5' A A 236 89.941 124.026 -9.966 1.00 68.99 O
TER
ATOM 1 O3' A B 249 95.314 123.574 3.786 1.00 61.86 O
ATOM 2 P A B 250 96.892 123.574 4.086 1.00 61.83 P
ATOM 3 OP1 A B 250 97.101 123.518 5.551 1.00 63.00 O
ATOM 4 OP2 A B 250 97.490 124.686 3.315 1.00 64.72 O
ATOM 5 O5' A B 250 97.407 122.194 3.473 1.00 62.21 O
ATOM 6 C5' A B 250 97.036 121.785 2.142 1.00 61.65 C
ATOM 7 C4' A B 250 97.815 120.552 1.735 1.00 62.82 C
ATOM 8 O4' A B 250 97.416 120.169 0.388 1.00 64.24 O
ATOM 9 C3' A B 250 99.330 120.722 1.675 1.00 63.46 C
ATOM 10 O3' A B 250 99.950 119.462 1.929 1.00 62.22 O
ATOM 11 C2' A B 250 99.552 121.125 0.220 1.00 64.13 C
ATOM 12 O2' A B 250 100.862 120.873 -0.245 1.00 64.44 O
ATOM 13 C1' A B 250 98.533 120.229 -0.479 1.00 64.65 C
ATOM 14 N9 A B 250 98.072 120.691 -1.787 1.00 65.83 N
ATOM 15 C8 A B 250 98.243 120.055 -2.992 1.00 66.30 C
ATOM 16 N7 A B 250 97.676 120.670 -4.001 1.00 67.49 N
ATOM 17 C5 A B 250 97.102 121.797 -3.426 1.00 67.03 C
ATOM 18 C6 A B 250 96.342 122.858 -3.965 1.00 66.87 C
ATOM 19 N6 A B 250 96.021 122.963 -5.257 1.00 65.32 N
ATOM 20 N1 A B 250 95.918 123.819 -3.118 1.00 67.47 N
ATOM 21 C2 A B 250 96.244 123.719 -1.822 1.00 68.10 C
ATOM 22 N3 A B 250 96.951 122.775 -1.197 1.00 67.80 N
ATOM 23 C4 A B 250 97.352 121.831 -2.065 1.00 66.67 C
ATOM 24 P U B 251 101.107 119.342 3.041 1.00 61.03 P
ATOM 25 OP1 U B 251 101.877 120.605 3.140 1.00 58.95 O
ATOM 26 OP2 U B 251 101.821 118.065 2.783 1.00 60.82 O
ATOM 27 O5' U B 251 100.300 119.193 4.403 1.00 63.56 O
TER
ATOM 2 P A A 235 94.509 119.151 -8.849 1.00 68.99 P
ATOM 3 OP1 A A 235 94.058 118.616 -10.163 1.00 69.70 O
ATOM 4 OP2 A A 235 95.954 119.412 -8.616 1.00 66.68 O
ATOM 5 O5' A A 235 93.688 120.474 -8.530 1.00 66.65 O
ATOM 6 C5' A A 235 92.285 120.573 -8.841 1.00 66.64 C
ATOM 7 C4' A A 235 91.698 121.770 -8.138 1.00 67.63 C
ATOM 8 O4' A A 235 91.624 121.495 -6.710 1.00 66.96 O
ATOM 9 C3' A A 235 92.546 123.032 -8.277 1.00 67.61 C
ATOM 10 O3' A A 235 91.717 124.181 -8.188 1.00 68.66 O
ATOM 11 C2' A A 235 93.424 122.957 -7.036 1.00 67.44 C
ATOM 12 O2' A A 235 93.976 124.198 -6.650 1.00 67.05 O
ATOM 13 C1' A A 235 92.421 122.429 -6.012 1.00 67.52 C
ATOM 14 N9 A A 235 93.023 121.761 -4.861 1.00 68.05 N
ATOM 15 C8 A A 235 93.806 120.633 -4.836 1.00 68.45 C
ATOM 16 N7 A A 235 94.209 120.297 -3.636 1.00 68.10 N
ATOM 17 C5 A A 235 93.649 121.265 -2.813 1.00 67.48 C
ATOM 18 C6 A A 235 93.701 121.470 -1.429 1.00 66.31 C
ATOM 19 N6 A A 235 94.372 120.681 -0.592 1.00 65.47 N
ATOM 20 N1 A A 235 93.034 122.528 -0.926 1.00 66.84 N
ATOM 21 C2 A A 235 92.362 123.321 -1.766 1.00 67.76 C
ATOM 22 N3 A A 235 92.236 123.233 -3.084 1.00 68.10 N
ATOM 23 C4 A A 235 92.913 122.170 -3.553 1.00 67.86 C
ATOM 24 P A A 236 91.199 124.892 -9.523 1.00 68.97 P
ATOM 25 OP1 A A 236 92.257 124.738 -10.556 1.00 71.53 O
ATOM 26 OP2 A A 236 90.715 126.245 -9.151 1.00 68.99 O
ATOM 27 O5' A A 236 89.941 124.026 -9.966 1.00 68.99 O
TER
ATOM 1 O3' A B 249 95.314 123.574 3.786 1.00 61.86 O
ATOM 2 P A B 250 96.892 123.574 4.086 1.00 61.83 P
ATOM 3 OP1 A B 250 97.101 123.518 5.551 1.00 63.00 O
ATOM 4 OP2 A B 250 97.490 124.686 3.315 1.00 64.72 O
ATOM 5 O5' A B 250 97.407 122.194 3.473 1.00 62.21 O
ATOM 6 C5' A B 250 97.036 121.785 2.142 1.00 61.65 C
ATOM 7 C4' A B 250 97.815 120.552 1.735 1.00 62.82 C
ATOM 8 O4' A B 250 97.416 120.169 0.388 1.00 64.24 O
ATOM 9 C3' A B 250 99.330 120.722 1.675 1.00 63.46 C
ATOM 10 O3' A B 250 99.950 119.462 1.929 1.00 62.22 O
ATOM 11 C2' A B 250 99.552 121.125 0.220 1.00 64.13 C
ATOM 12 O2' A B 250 100.862 120.873 -0.245 1.00 64.44 O
ATOM 13 C1' A B 250 98.533 120.229 -0.479 1.00 64.65 C
ATOM 14 N9 A B 250 98.072 120.691 -1.787 1.00 65.83 N
ATOM 15 C8 A B 250 98.243 120.055 -2.992 1.00 66.30 C
ATOM 16 N7 A B 250 97.676 120.670 -4.001 1.00 67.49 N
ATOM 17 C5 A B 250 97.102 121.797 -3.426 1.00 67.03 C
ATOM 18 C6 A B 250 96.342 122.858 -3.965 1.00 66.87 C
ATOM 19 N6 A B 250 96.021 122.963 -5.257 1.00 65.32 N
ATOM 20 N1 A B 250 95.918 123.819 -3.118 1.00 67.47 N
ATOM 21 C2 A B 250 96.244 123.719 -1.822 1.00 68.10 C
ATOM 22 N3 A B 250 96.951 122.775 -1.197 1.00 67.80 N
ATOM 23 C4 A B 250 97.352 121.831 -2.065 1.00 66.67 C
ATOM 24 P U B 251 101.107 119.342 3.041 1.00 61.03 P
ATOM 25 OP1 U B 251 101.877 120.605 3.140 1.00 58.95 O
ATOM 26 OP2 U B 251 101.821 118.065 2.783 1.00 60.82 O
ATOM 27 O5' U B 251 100.300 119.193 4.403 1.00 63.56 O
TER
Atoms:
OP1: (94.058,118.616,-10.163)
OP2: (95.954,119.412,-8.616)
C3': (92.546,123.032,-8.277)
C1': (92.421,122.429,-6.012)
C5': (92.285,120.573,-8.841)
O4': (91.624,121.495,-6.710)
C8: (93.806,120.633,-4.836)
O2': (93.976,124.198,-6.650)
C6: (93.701,121.470,-1.429)
C5: (93.649,121.265,-2.813)
C4: (92.913,122.170,-3.553)
P: (94.509,119.151,-8.849)
C4': (91.698,121.770,-8.138)
C2': (93.424,122.957,-7.036)
C2: (92.362,123.321,-1.766)
N1: (93.034,122.528,-0.926)
N3: (92.236,123.233,-3.084)
N6: (94.372,120.681,-0.592)
N7: (94.209,120.297,-3.636)
N9: (93.023,121.761,-4.861)
O5': (93.688,120.474,-8.530)
O3': (91.717,124.181,-8.188)
OP2: (95.954,119.412,-8.616)
C3': (92.546,123.032,-8.277)
C1': (92.421,122.429,-6.012)
C5': (92.285,120.573,-8.841)
O4': (91.624,121.495,-6.710)
C8: (93.806,120.633,-4.836)
O2': (93.976,124.198,-6.650)
C6: (93.701,121.470,-1.429)
C5: (93.649,121.265,-2.813)
C4: (92.913,122.170,-3.553)
P: (94.509,119.151,-8.849)
C4': (91.698,121.770,-8.138)
C2': (93.424,122.957,-7.036)
C2: (92.362,123.321,-1.766)
N1: (93.034,122.528,-0.926)
N3: (92.236,123.233,-3.084)
N6: (94.372,120.681,-0.592)
N7: (94.209,120.297,-3.636)
N9: (93.023,121.761,-4.861)
O5': (93.688,120.474,-8.530)
O3': (91.717,124.181,-8.188)
OP1: (97.101,123.518,5.551)
OP2: (97.490,124.686,3.315)
C3': (99.330,120.722,1.675)
C1': (98.533,120.229,-0.479)
C5': (97.036,121.785,2.142)
O4': (97.416,120.169,0.388)
C8: (98.243,120.055,-2.992)
O2': (100.862,120.873,-0.245)
C6: (96.342,122.858,-3.965)
C5: (97.102,121.797,-3.426)
C4: (97.352,121.831,-2.065)
P: (96.892,123.574,4.086)
C4': (97.815,120.552,1.735)
C2': (99.552,121.125,0.220)
C2: (96.244,123.719,-1.822)
N1: (95.918,123.819,-3.118)
N3: (96.951,122.775,-1.197)
N6: (96.021,122.963,-5.257)
N7: (97.676,120.670,-4.001)
N9: (98.072,120.691,-1.787)
O5': (97.407,122.194,3.473)
O3': (99.950,119.462,1.929)
OP2: (97.490,124.686,3.315)
C3': (99.330,120.722,1.675)
C1': (98.533,120.229,-0.479)
C5': (97.036,121.785,2.142)
O4': (97.416,120.169,0.388)
C8: (98.243,120.055,-2.992)
O2': (100.862,120.873,-0.245)
C6: (96.342,122.858,-3.965)
C5: (97.102,121.797,-3.426)
C4: (97.352,121.831,-2.065)
P: (96.892,123.574,4.086)
C4': (97.815,120.552,1.735)
C2': (99.552,121.125,0.220)
C2: (96.244,123.719,-1.822)
N1: (95.918,123.819,-3.118)
N3: (96.951,122.775,-1.197)
N6: (96.021,122.963,-5.257)
N7: (97.676,120.670,-4.001)
N9: (98.072,120.691,-1.787)
O5': (97.407,122.194,3.473)
O3': (99.950,119.462,1.929)
Image (generated by PyMOL):