Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2044:A2607
Extra
PDB:
ATOM 1 O3' C A2043 -58.639 -67.415 -15.613 1.00 0.01 O
ATOM 2 P A A2044 -59.080 -66.542 -14.385 1.00 0.01 P
ATOM 3 OP1 A A2044 -58.376 -65.264 -14.484 1.00 0.01 O
ATOM 4 OP2 A A2044 -58.880 -67.346 -13.206 1.00 0.01 O
ATOM 5 O5' A A2044 -60.617 -66.355 -14.663 1.00 0.01 O
ATOM 6 C5' A A2044 -61.522 -66.123 -13.605 1.00 0.01 C
ATOM 7 C4' A A2044 -62.563 -67.207 -13.504 1.00 0.01 C
ATOM 8 O4' A A2044 -61.901 -68.489 -13.414 1.00 0.01 O
ATOM 9 C3' A A2044 -63.476 -67.115 -12.291 1.00 0.01 C
ATOM 10 O3' A A2044 -64.784 -67.541 -12.651 1.00 0.01 O
ATOM 11 C2' A A2044 -62.856 -68.112 -11.315 1.00 0.01 C
ATOM 12 O2' A A2044 -63.770 -68.654 -10.402 1.00 0.01 O
ATOM 13 C1' A A2044 -62.320 -69.174 -12.257 1.00 0.01 C
ATOM 14 N9 A A2044 -61.172 -69.924 -11.747 1.00 0.01 N
ATOM 15 C8 A A2044 -59.894 -69.488 -11.831 1.00 0.01 C
ATOM 16 N7 A A2044 -58.984 -70.300 -11.368 1.00 0.01 N
ATOM 17 C5 A A2044 -59.738 -71.378 -10.971 1.00 0.01 C
ATOM 18 C6 A A2044 -59.339 -72.569 -10.369 1.00 0.01 C
ATOM 19 N6 A A2044 -58.032 -72.808 -10.102 1.00 0.01 N
ATOM 20 N1 A A2044 -60.283 -73.465 -10.059 1.00 0.01 N
ATOM 21 C2 A A2044 -61.513 -73.122 -10.355 1.00 0.01 C
ATOM 22 N3 A A2044 -62.002 -72.036 -10.906 1.00 0.01 N
ATOM 23 C4 A A2044 -61.062 -71.176 -11.208 1.00 0.01 C
ATOM 24 P A A2045 -65.960 -66.477 -12.851 1.00 0.01 P
ATOM 25 OP1 A A2045 -65.926 -66.064 -14.226 1.00 0.01 O
ATOM 26 OP2 A A2045 -65.821 -65.476 -11.814 1.00 0.01 O
ATOM 27 O5' A A2045 -67.257 -67.339 -12.594 1.00 0.01 O
TER
ATOM 1 O3' U B2606 -52.756 -71.365 -5.374 1.00 0.01 O
ATOM 2 P A B2607 -53.570 -72.002 -6.569 1.00 0.01 P
ATOM 3 OP1 A B2607 -52.801 -73.153 -7.041 1.00 0.01 O
ATOM 4 OP2 A B2607 -53.902 -70.931 -7.511 1.00 0.01 O
ATOM 5 O5' A B2607 -54.853 -72.486 -5.845 1.00 0.01 O
ATOM 6 C5' A B2607 -54.774 -73.534 -4.924 1.00 0.01 C
ATOM 7 C4' A B2607 -55.971 -74.414 -5.019 1.00 0.01 C
ATOM 8 O4' A B2607 -57.148 -73.584 -5.045 1.00 0.01 O
ATOM 9 C3' A B2607 -56.030 -75.291 -6.245 1.00 0.01 C
ATOM 10 O3' A B2607 -56.575 -76.535 -5.886 1.00 0.01 O
ATOM 11 C2' A B2607 -57.005 -74.578 -7.149 1.00 0.01 C
ATOM 12 O2' A B2607 -57.730 -75.450 -7.982 1.00 0.01 O
ATOM 13 C1' A B2607 -57.925 -73.883 -6.155 1.00 0.01 C
ATOM 14 N9 A B2607 -58.479 -72.636 -6.651 1.00 0.01 N
ATOM 15 C8 A B2607 -57.787 -71.527 -7.021 1.00 0.01 C
ATOM 16 N7 A B2607 -58.549 -70.566 -7.455 1.00 0.01 N
ATOM 17 C5 A B2607 -59.830 -71.102 -7.366 1.00 0.01 C
ATOM 18 C6 A B2607 -61.104 -70.613 -7.686 1.00 0.01 C
ATOM 19 N6 A B2607 -61.303 -69.392 -8.171 1.00 0.01 N
ATOM 20 N1 A B2607 -62.172 -71.384 -7.499 1.00 0.01 N
ATOM 21 C2 A B2607 -61.952 -72.571 -7.000 1.00 0.01 C
ATOM 22 N3 A B2607 -60.816 -73.139 -6.662 1.00 0.01 N
ATOM 23 C4 A B2607 -59.786 -72.358 -6.872 1.00 0.01 C
ATOM 24 P U B2608 -55.657 -77.827 -5.822 1.00 0.01 P
ATOM 25 OP1 U B2608 -54.616 -77.577 -4.828 1.00 0.01 O
ATOM 26 OP2 U B2608 -55.261 -78.146 -7.186 1.00 0.01 O
ATOM 27 O5' U B2608 -56.647 -78.920 -5.285 1.00 0.01 O
TER
ATOM 2 P A A2044 -59.080 -66.542 -14.385 1.00 0.01 P
ATOM 3 OP1 A A2044 -58.376 -65.264 -14.484 1.00 0.01 O
ATOM 4 OP2 A A2044 -58.880 -67.346 -13.206 1.00 0.01 O
ATOM 5 O5' A A2044 -60.617 -66.355 -14.663 1.00 0.01 O
ATOM 6 C5' A A2044 -61.522 -66.123 -13.605 1.00 0.01 C
ATOM 7 C4' A A2044 -62.563 -67.207 -13.504 1.00 0.01 C
ATOM 8 O4' A A2044 -61.901 -68.489 -13.414 1.00 0.01 O
ATOM 9 C3' A A2044 -63.476 -67.115 -12.291 1.00 0.01 C
ATOM 10 O3' A A2044 -64.784 -67.541 -12.651 1.00 0.01 O
ATOM 11 C2' A A2044 -62.856 -68.112 -11.315 1.00 0.01 C
ATOM 12 O2' A A2044 -63.770 -68.654 -10.402 1.00 0.01 O
ATOM 13 C1' A A2044 -62.320 -69.174 -12.257 1.00 0.01 C
ATOM 14 N9 A A2044 -61.172 -69.924 -11.747 1.00 0.01 N
ATOM 15 C8 A A2044 -59.894 -69.488 -11.831 1.00 0.01 C
ATOM 16 N7 A A2044 -58.984 -70.300 -11.368 1.00 0.01 N
ATOM 17 C5 A A2044 -59.738 -71.378 -10.971 1.00 0.01 C
ATOM 18 C6 A A2044 -59.339 -72.569 -10.369 1.00 0.01 C
ATOM 19 N6 A A2044 -58.032 -72.808 -10.102 1.00 0.01 N
ATOM 20 N1 A A2044 -60.283 -73.465 -10.059 1.00 0.01 N
ATOM 21 C2 A A2044 -61.513 -73.122 -10.355 1.00 0.01 C
ATOM 22 N3 A A2044 -62.002 -72.036 -10.906 1.00 0.01 N
ATOM 23 C4 A A2044 -61.062 -71.176 -11.208 1.00 0.01 C
ATOM 24 P A A2045 -65.960 -66.477 -12.851 1.00 0.01 P
ATOM 25 OP1 A A2045 -65.926 -66.064 -14.226 1.00 0.01 O
ATOM 26 OP2 A A2045 -65.821 -65.476 -11.814 1.00 0.01 O
ATOM 27 O5' A A2045 -67.257 -67.339 -12.594 1.00 0.01 O
TER
ATOM 1 O3' U B2606 -52.756 -71.365 -5.374 1.00 0.01 O
ATOM 2 P A B2607 -53.570 -72.002 -6.569 1.00 0.01 P
ATOM 3 OP1 A B2607 -52.801 -73.153 -7.041 1.00 0.01 O
ATOM 4 OP2 A B2607 -53.902 -70.931 -7.511 1.00 0.01 O
ATOM 5 O5' A B2607 -54.853 -72.486 -5.845 1.00 0.01 O
ATOM 6 C5' A B2607 -54.774 -73.534 -4.924 1.00 0.01 C
ATOM 7 C4' A B2607 -55.971 -74.414 -5.019 1.00 0.01 C
ATOM 8 O4' A B2607 -57.148 -73.584 -5.045 1.00 0.01 O
ATOM 9 C3' A B2607 -56.030 -75.291 -6.245 1.00 0.01 C
ATOM 10 O3' A B2607 -56.575 -76.535 -5.886 1.00 0.01 O
ATOM 11 C2' A B2607 -57.005 -74.578 -7.149 1.00 0.01 C
ATOM 12 O2' A B2607 -57.730 -75.450 -7.982 1.00 0.01 O
ATOM 13 C1' A B2607 -57.925 -73.883 -6.155 1.00 0.01 C
ATOM 14 N9 A B2607 -58.479 -72.636 -6.651 1.00 0.01 N
ATOM 15 C8 A B2607 -57.787 -71.527 -7.021 1.00 0.01 C
ATOM 16 N7 A B2607 -58.549 -70.566 -7.455 1.00 0.01 N
ATOM 17 C5 A B2607 -59.830 -71.102 -7.366 1.00 0.01 C
ATOM 18 C6 A B2607 -61.104 -70.613 -7.686 1.00 0.01 C
ATOM 19 N6 A B2607 -61.303 -69.392 -8.171 1.00 0.01 N
ATOM 20 N1 A B2607 -62.172 -71.384 -7.499 1.00 0.01 N
ATOM 21 C2 A B2607 -61.952 -72.571 -7.000 1.00 0.01 C
ATOM 22 N3 A B2607 -60.816 -73.139 -6.662 1.00 0.01 N
ATOM 23 C4 A B2607 -59.786 -72.358 -6.872 1.00 0.01 C
ATOM 24 P U B2608 -55.657 -77.827 -5.822 1.00 0.01 P
ATOM 25 OP1 U B2608 -54.616 -77.577 -4.828 1.00 0.01 O
ATOM 26 OP2 U B2608 -55.261 -78.146 -7.186 1.00 0.01 O
ATOM 27 O5' U B2608 -56.647 -78.920 -5.285 1.00 0.01 O
TER
Atoms:
OP1: (-58.376,-65.264,-14.484)
OP2: (-58.880,-67.346,-13.206)
C3': (-63.476,-67.115,-12.291)
C1': (-62.320,-69.174,-12.257)
C5': (-61.522,-66.123,-13.605)
O4': (-61.901,-68.489,-13.414)
C8: (-59.894,-69.488,-11.831)
O2': (-63.770,-68.654,-10.402)
C6: (-59.339,-72.569,-10.369)
C5: (-59.738,-71.378,-10.971)
C4: (-61.062,-71.176,-11.208)
P: (-59.080,-66.542,-14.385)
C4': (-62.563,-67.207,-13.504)
C2': (-62.856,-68.112,-11.315)
C2: (-61.513,-73.122,-10.355)
N1: (-60.283,-73.465,-10.059)
N3: (-62.002,-72.036,-10.906)
N6: (-58.032,-72.808,-10.102)
N7: (-58.984,-70.300,-11.368)
N9: (-61.172,-69.924,-11.747)
O5': (-60.617,-66.355,-14.663)
O3': (-64.784,-67.541,-12.651)
OP2: (-58.880,-67.346,-13.206)
C3': (-63.476,-67.115,-12.291)
C1': (-62.320,-69.174,-12.257)
C5': (-61.522,-66.123,-13.605)
O4': (-61.901,-68.489,-13.414)
C8: (-59.894,-69.488,-11.831)
O2': (-63.770,-68.654,-10.402)
C6: (-59.339,-72.569,-10.369)
C5: (-59.738,-71.378,-10.971)
C4: (-61.062,-71.176,-11.208)
P: (-59.080,-66.542,-14.385)
C4': (-62.563,-67.207,-13.504)
C2': (-62.856,-68.112,-11.315)
C2: (-61.513,-73.122,-10.355)
N1: (-60.283,-73.465,-10.059)
N3: (-62.002,-72.036,-10.906)
N6: (-58.032,-72.808,-10.102)
N7: (-58.984,-70.300,-11.368)
N9: (-61.172,-69.924,-11.747)
O5': (-60.617,-66.355,-14.663)
O3': (-64.784,-67.541,-12.651)
OP1: (-52.801,-73.153,-7.041)
OP2: (-53.902,-70.931,-7.511)
C3': (-56.030,-75.291,-6.245)
C1': (-57.925,-73.883,-6.155)
C5': (-54.774,-73.534,-4.924)
O4': (-57.148,-73.584,-5.045)
C8: (-57.787,-71.527,-7.021)
O2': (-57.730,-75.450,-7.982)
C6: (-61.104,-70.613,-7.686)
C5: (-59.830,-71.102,-7.366)
C4: (-59.786,-72.358,-6.872)
P: (-53.570,-72.002,-6.569)
C4': (-55.971,-74.414,-5.019)
C2': (-57.005,-74.578,-7.149)
C2: (-61.952,-72.571,-7.000)
N1: (-62.172,-71.384,-7.499)
N3: (-60.816,-73.139,-6.662)
N6: (-61.303,-69.392,-8.171)
N7: (-58.549,-70.566,-7.455)
N9: (-58.479,-72.636,-6.651)
O5': (-54.853,-72.486,-5.845)
O3': (-56.575,-76.535,-5.886)
OP2: (-53.902,-70.931,-7.511)
C3': (-56.030,-75.291,-6.245)
C1': (-57.925,-73.883,-6.155)
C5': (-54.774,-73.534,-4.924)
O4': (-57.148,-73.584,-5.045)
C8: (-57.787,-71.527,-7.021)
O2': (-57.730,-75.450,-7.982)
C6: (-61.104,-70.613,-7.686)
C5: (-59.830,-71.102,-7.366)
C4: (-59.786,-72.358,-6.872)
P: (-53.570,-72.002,-6.569)
C4': (-55.971,-74.414,-5.019)
C2': (-57.005,-74.578,-7.149)
C2: (-61.952,-72.571,-7.000)
N1: (-62.172,-71.384,-7.499)
N3: (-60.816,-73.139,-6.662)
N6: (-61.303,-69.392,-8.171)
N7: (-58.549,-70.566,-7.455)
N9: (-58.479,-72.636,-6.651)
O5': (-54.853,-72.486,-5.845)
O3': (-56.575,-76.535,-5.886)
Image (generated by PyMOL):