Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A235:A250
Extra
PDB:
ATOM 1 O3' G A 234 94.113 117.840 -7.442 1.00 73.43 O
ATOM 2 P A A 235 94.755 118.869 -8.493 1.00 75.78 P
ATOM 3 OP1 A A 235 94.374 118.330 -9.823 1.00 76.85 O
ATOM 4 OP2 A A 235 96.189 119.128 -8.190 1.00 74.89 O
ATOM 5 O5' A A 235 93.959 120.226 -8.259 1.00 74.17 O
ATOM 6 C5' A A 235 92.579 120.354 -8.620 1.00 72.76 C
ATOM 7 C4' A A 235 91.973 121.485 -7.847 1.00 72.77 C
ATOM 8 O4' A A 235 91.934 121.117 -6.440 1.00 73.47 O
ATOM 9 C3' A A 235 92.788 122.772 -7.912 1.00 73.35 C
ATOM 10 O3' A A 235 91.901 123.877 -7.814 1.00 73.07 O
ATOM 11 C2' A A 235 93.652 122.664 -6.660 1.00 73.39 C
ATOM 12 O2' A A 235 94.204 123.862 -6.157 1.00 72.46 O
ATOM 13 C1' A A 235 92.646 122.074 -5.685 1.00 73.70 C
ATOM 14 N9 A A 235 93.246 121.418 -4.528 1.00 74.59 N
ATOM 15 C8 A A 235 93.993 120.259 -4.478 1.00 75.42 C
ATOM 16 N7 A A 235 94.380 119.932 -3.266 1.00 75.12 N
ATOM 17 C5 A A 235 93.853 120.940 -2.467 1.00 74.42 C
ATOM 18 C6 A A 235 93.903 121.168 -1.088 1.00 73.74 C
ATOM 19 N6 A A 235 94.536 120.367 -0.229 1.00 72.64 N
ATOM 20 N1 A A 235 93.275 122.264 -0.611 1.00 73.97 N
ATOM 21 C2 A A 235 92.645 123.073 -1.470 1.00 73.90 C
ATOM 22 N3 A A 235 92.527 122.968 -2.790 1.00 73.40 N
ATOM 23 C4 A A 235 93.158 121.865 -3.232 1.00 74.19 C
ATOM 24 P A A 236 91.382 124.590 -9.154 1.00 74.70 P
ATOM 25 OP1 A A 236 92.448 124.379 -10.193 1.00 73.77 O
ATOM 26 OP2 A A 236 90.963 125.966 -8.795 1.00 75.26 O
ATOM 27 O5' A A 236 90.078 123.767 -9.576 1.00 73.77 O
TER
ATOM 1 O3' A B 249 95.462 123.266 4.211 1.00 64.86 O
ATOM 2 P A B 250 97.035 123.160 4.528 1.00 63.47 P
ATOM 3 OP1 A B 250 97.219 123.076 6.001 1.00 65.13 O
ATOM 4 OP2 A B 250 97.752 124.215 3.787 1.00 63.32 O
ATOM 5 O5' A B 250 97.435 121.733 3.928 1.00 63.47 O
ATOM 6 C5' A B 250 97.147 121.378 2.547 1.00 62.26 C
ATOM 7 C4' A B 250 97.967 120.164 2.131 1.00 61.02 C
ATOM 8 O4' A B 250 97.581 119.727 0.802 1.00 60.69 O
ATOM 9 C3' A B 250 99.471 120.369 2.055 1.00 61.98 C
ATOM 10 O3' A B 250 100.092 119.117 2.299 1.00 62.04 O
ATOM 11 C2' A B 250 99.685 120.741 0.594 1.00 61.74 C
ATOM 12 O2' A B 250 101.027 120.507 0.192 1.00 63.87 O
ATOM 13 C1' A B 250 98.694 119.786 -0.073 1.00 61.10 C
ATOM 14 N9 A B 250 98.191 120.158 -1.397 1.00 59.95 N
ATOM 15 C8 A B 250 98.256 119.419 -2.555 1.00 59.75 C
ATOM 16 N7 A B 250 97.659 119.983 -3.576 1.00 60.64 N
ATOM 17 C5 A B 250 97.183 121.185 -3.064 1.00 60.26 C
ATOM 18 C6 A B 250 96.459 122.256 -3.650 1.00 60.80 C
ATOM 19 N6 A B 250 96.098 122.302 -4.936 1.00 59.65 N
ATOM 20 N1 A B 250 96.125 123.295 -2.853 1.00 60.56 N
ATOM 21 C2 A B 250 96.520 123.269 -1.571 1.00 60.70 C
ATOM 22 N3 A B 250 97.218 122.337 -0.916 1.00 60.02 N
ATOM 23 C4 A B 250 97.514 121.308 -1.725 1.00 59.63 C
ATOM 24 P U B 251 101.141 118.985 3.493 1.00 64.67 P
ATOM 25 OP1 U B 251 101.900 120.276 3.525 1.00 64.35 O
ATOM 26 OP2 U B 251 101.870 117.684 3.398 1.00 63.33 O
ATOM 27 O5' U B 251 100.205 118.903 4.767 1.00 65.19 O
TER
ATOM 2 P A A 235 94.755 118.869 -8.493 1.00 75.78 P
ATOM 3 OP1 A A 235 94.374 118.330 -9.823 1.00 76.85 O
ATOM 4 OP2 A A 235 96.189 119.128 -8.190 1.00 74.89 O
ATOM 5 O5' A A 235 93.959 120.226 -8.259 1.00 74.17 O
ATOM 6 C5' A A 235 92.579 120.354 -8.620 1.00 72.76 C
ATOM 7 C4' A A 235 91.973 121.485 -7.847 1.00 72.77 C
ATOM 8 O4' A A 235 91.934 121.117 -6.440 1.00 73.47 O
ATOM 9 C3' A A 235 92.788 122.772 -7.912 1.00 73.35 C
ATOM 10 O3' A A 235 91.901 123.877 -7.814 1.00 73.07 O
ATOM 11 C2' A A 235 93.652 122.664 -6.660 1.00 73.39 C
ATOM 12 O2' A A 235 94.204 123.862 -6.157 1.00 72.46 O
ATOM 13 C1' A A 235 92.646 122.074 -5.685 1.00 73.70 C
ATOM 14 N9 A A 235 93.246 121.418 -4.528 1.00 74.59 N
ATOM 15 C8 A A 235 93.993 120.259 -4.478 1.00 75.42 C
ATOM 16 N7 A A 235 94.380 119.932 -3.266 1.00 75.12 N
ATOM 17 C5 A A 235 93.853 120.940 -2.467 1.00 74.42 C
ATOM 18 C6 A A 235 93.903 121.168 -1.088 1.00 73.74 C
ATOM 19 N6 A A 235 94.536 120.367 -0.229 1.00 72.64 N
ATOM 20 N1 A A 235 93.275 122.264 -0.611 1.00 73.97 N
ATOM 21 C2 A A 235 92.645 123.073 -1.470 1.00 73.90 C
ATOM 22 N3 A A 235 92.527 122.968 -2.790 1.00 73.40 N
ATOM 23 C4 A A 235 93.158 121.865 -3.232 1.00 74.19 C
ATOM 24 P A A 236 91.382 124.590 -9.154 1.00 74.70 P
ATOM 25 OP1 A A 236 92.448 124.379 -10.193 1.00 73.77 O
ATOM 26 OP2 A A 236 90.963 125.966 -8.795 1.00 75.26 O
ATOM 27 O5' A A 236 90.078 123.767 -9.576 1.00 73.77 O
TER
ATOM 1 O3' A B 249 95.462 123.266 4.211 1.00 64.86 O
ATOM 2 P A B 250 97.035 123.160 4.528 1.00 63.47 P
ATOM 3 OP1 A B 250 97.219 123.076 6.001 1.00 65.13 O
ATOM 4 OP2 A B 250 97.752 124.215 3.787 1.00 63.32 O
ATOM 5 O5' A B 250 97.435 121.733 3.928 1.00 63.47 O
ATOM 6 C5' A B 250 97.147 121.378 2.547 1.00 62.26 C
ATOM 7 C4' A B 250 97.967 120.164 2.131 1.00 61.02 C
ATOM 8 O4' A B 250 97.581 119.727 0.802 1.00 60.69 O
ATOM 9 C3' A B 250 99.471 120.369 2.055 1.00 61.98 C
ATOM 10 O3' A B 250 100.092 119.117 2.299 1.00 62.04 O
ATOM 11 C2' A B 250 99.685 120.741 0.594 1.00 61.74 C
ATOM 12 O2' A B 250 101.027 120.507 0.192 1.00 63.87 O
ATOM 13 C1' A B 250 98.694 119.786 -0.073 1.00 61.10 C
ATOM 14 N9 A B 250 98.191 120.158 -1.397 1.00 59.95 N
ATOM 15 C8 A B 250 98.256 119.419 -2.555 1.00 59.75 C
ATOM 16 N7 A B 250 97.659 119.983 -3.576 1.00 60.64 N
ATOM 17 C5 A B 250 97.183 121.185 -3.064 1.00 60.26 C
ATOM 18 C6 A B 250 96.459 122.256 -3.650 1.00 60.80 C
ATOM 19 N6 A B 250 96.098 122.302 -4.936 1.00 59.65 N
ATOM 20 N1 A B 250 96.125 123.295 -2.853 1.00 60.56 N
ATOM 21 C2 A B 250 96.520 123.269 -1.571 1.00 60.70 C
ATOM 22 N3 A B 250 97.218 122.337 -0.916 1.00 60.02 N
ATOM 23 C4 A B 250 97.514 121.308 -1.725 1.00 59.63 C
ATOM 24 P U B 251 101.141 118.985 3.493 1.00 64.67 P
ATOM 25 OP1 U B 251 101.900 120.276 3.525 1.00 64.35 O
ATOM 26 OP2 U B 251 101.870 117.684 3.398 1.00 63.33 O
ATOM 27 O5' U B 251 100.205 118.903 4.767 1.00 65.19 O
TER
Atoms:
OP1: (94.374,118.330,-9.823)
OP2: (96.189,119.128,-8.190)
C3': (92.788,122.772,-7.912)
C1': (92.646,122.074,-5.685)
C5': (92.579,120.354,-8.620)
O4': (91.934,121.117,-6.440)
C8: (93.993,120.259,-4.478)
O2': (94.204,123.862,-6.157)
C6: (93.903,121.168,-1.088)
C5: (93.853,120.940,-2.467)
C4: (93.158,121.865,-3.232)
P: (94.755,118.869,-8.493)
C4': (91.973,121.485,-7.847)
C2': (93.652,122.664,-6.660)
C2: (92.645,123.073,-1.470)
N1: (93.275,122.264,-0.611)
N3: (92.527,122.968,-2.790)
N6: (94.536,120.367,-0.229)
N7: (94.380,119.932,-3.266)
N9: (93.246,121.418,-4.528)
O5': (93.959,120.226,-8.259)
O3': (91.901,123.877,-7.814)
OP2: (96.189,119.128,-8.190)
C3': (92.788,122.772,-7.912)
C1': (92.646,122.074,-5.685)
C5': (92.579,120.354,-8.620)
O4': (91.934,121.117,-6.440)
C8: (93.993,120.259,-4.478)
O2': (94.204,123.862,-6.157)
C6: (93.903,121.168,-1.088)
C5: (93.853,120.940,-2.467)
C4: (93.158,121.865,-3.232)
P: (94.755,118.869,-8.493)
C4': (91.973,121.485,-7.847)
C2': (93.652,122.664,-6.660)
C2: (92.645,123.073,-1.470)
N1: (93.275,122.264,-0.611)
N3: (92.527,122.968,-2.790)
N6: (94.536,120.367,-0.229)
N7: (94.380,119.932,-3.266)
N9: (93.246,121.418,-4.528)
O5': (93.959,120.226,-8.259)
O3': (91.901,123.877,-7.814)
OP1: (97.219,123.076,6.001)
OP2: (97.752,124.215,3.787)
C3': (99.471,120.369,2.055)
C1': (98.694,119.786,-0.073)
C5': (97.147,121.378,2.547)
O4': (97.581,119.727,0.802)
C8: (98.256,119.419,-2.555)
O2': (101.027,120.507,0.192)
C6: (96.459,122.256,-3.650)
C5: (97.183,121.185,-3.064)
C4: (97.514,121.308,-1.725)
P: (97.035,123.160,4.528)
C4': (97.967,120.164,2.131)
C2': (99.685,120.741,0.594)
C2: (96.520,123.269,-1.571)
N1: (96.125,123.295,-2.853)
N3: (97.218,122.337,-0.916)
N6: (96.098,122.302,-4.936)
N7: (97.659,119.983,-3.576)
N9: (98.191,120.158,-1.397)
O5': (97.435,121.733,3.928)
O3': (100.092,119.117,2.299)
OP2: (97.752,124.215,3.787)
C3': (99.471,120.369,2.055)
C1': (98.694,119.786,-0.073)
C5': (97.147,121.378,2.547)
O4': (97.581,119.727,0.802)
C8: (98.256,119.419,-2.555)
O2': (101.027,120.507,0.192)
C6: (96.459,122.256,-3.650)
C5: (97.183,121.185,-3.064)
C4: (97.514,121.308,-1.725)
P: (97.035,123.160,4.528)
C4': (97.967,120.164,2.131)
C2': (99.685,120.741,0.594)
C2: (96.520,123.269,-1.571)
N1: (96.125,123.295,-2.853)
N3: (97.218,122.337,-0.916)
N6: (96.098,122.302,-4.936)
N7: (97.659,119.983,-3.576)
N9: (98.191,120.158,-1.397)
O5': (97.435,121.733,3.928)
O3': (100.092,119.117,2.299)
Image (generated by PyMOL):