ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A2534:A2542

Extra

PDB:
ATOM 1 O3' U A2533 -49.514 46.900 164.121 1.00 53.99 O
ATOM 2 P A A2534 -51.017 47.421 163.877 1.00 64.96 P
ATOM 3 OP1 A A2534 -51.942 46.293 164.157 1.00173.88 O
ATOM 4 OP2 A A2534 -51.070 48.099 162.553 1.00173.95 O
ATOM 5 O5' A A2534 -51.240 48.514 165.010 1.00 69.61 O
ATOM 6 C5' A A2534 -52.410 49.330 164.988 1.00 69.61 C
ATOM 7 C4' A A2534 -52.535 50.110 166.266 1.00 69.61 C
ATOM 8 O4' A A2534 -51.458 51.077 166.372 1.00 69.61 O
ATOM 9 C3' A A2534 -53.794 50.950 166.316 1.00 69.61 C
ATOM 10 O3' A A2534 -54.890 50.169 166.731 1.00 69.61 O
ATOM 11 C2' A A2534 -53.433 52.065 167.280 1.00 69.61 C
ATOM 12 O2' A A2534 -53.595 51.689 168.634 1.00 69.61 O
ATOM 13 C1' A A2534 -51.951 52.277 166.957 1.00 69.61 C
ATOM 14 N9 A A2534 -51.687 53.404 166.047 1.00 75.49 N
ATOM 15 C8 A A2534 -52.502 54.486 165.786 1.00 75.49 C
ATOM 16 N7 A A2534 -51.982 55.351 164.951 1.00 75.49 N
ATOM 17 C5 A A2534 -50.746 54.808 164.634 1.00 75.49 C
ATOM 18 C6 A A2534 -49.711 55.250 163.801 1.00 75.49 C
ATOM 19 N6 A A2534 -49.754 56.384 163.106 1.00 75.49 N
ATOM 20 N1 A A2534 -48.612 54.476 163.703 1.00 75.49 N
ATOM 21 C2 A A2534 -48.568 53.337 164.399 1.00 75.49 C
ATOM 22 N3 A A2534 -49.472 52.813 165.216 1.00 75.49 N
ATOM 23 C4 A A2534 -50.553 53.606 165.293 1.00 75.49 C
ATOM 24 P C A2535 -56.065 49.877 165.690 1.00 89.99 P
ATOM 25 OP1 C A2535 -57.102 49.061 166.362 1.00 77.64 O
ATOM 26 OP2 C A2535 -55.435 49.380 164.431 1.00 77.63 O
ATOM 27 O5' C A2535 -56.652 51.328 165.417 1.00 90.70 O
TER

ATOM 1 O3' G B2541 -44.752 59.505 161.827 1.00 64.93 O
ATOM 2 P A B2542 -43.490 58.869 162.599 1.00 57.98 P
ATOM 3 OP1 A B2542 -42.987 59.912 163.533 1.00126.44 O
ATOM 4 OP2 A B2542 -42.568 58.282 161.591 1.00126.59 O
ATOM 5 O5' A B2542 -44.147 57.688 163.443 1.00 74.19 O
ATOM 6 C5' A B2542 -44.049 57.653 164.877 1.00 74.19 C
ATOM 7 C4' A B2542 -45.019 58.632 165.488 1.00 74.19 C
ATOM 8 O4' A B2542 -46.381 58.296 165.119 1.00 74.19 O
ATOM 9 C3' A B2542 -45.047 58.671 167.003 1.00 74.19 C
ATOM 10 O3' A B2542 -44.009 59.486 167.513 1.00 74.19 O
ATOM 11 C2' A B2542 -46.417 59.266 167.303 1.00 74.19 C
ATOM 12 O2' A B2542 -46.411 60.679 167.297 1.00 74.19 O
ATOM 13 C1' A B2542 -47.262 58.726 166.145 1.00 74.19 C
ATOM 14 N9 A B2542 -48.119 57.615 166.563 1.00116.23 N
ATOM 15 C8 A B2542 -49.488 57.626 166.681 1.00116.30 C
ATOM 16 N7 A B2542 -49.987 56.513 167.159 1.00116.36 N
ATOM 17 C5 A B2542 -48.875 55.709 167.354 1.00116.36 C
ATOM 18 C6 A B2542 -48.730 54.412 167.857 1.00116.37 C
ATOM 19 N6 A B2542 -49.747 53.674 168.297 1.00116.31 N
ATOM 20 N1 A B2542 -47.486 53.893 167.905 1.00116.36 N
ATOM 21 C2 A B2542 -46.461 54.645 167.489 1.00116.36 C
ATOM 22 N3 A B2542 -46.468 55.883 167.011 1.00116.34 N
ATOM 23 C4 A B2542 -47.720 56.365 166.968 1.00116.30 C
ATOM 24 P C B2543 -43.726 59.506 169.086 1.00 92.06 P
ATOM 25 OP1 C B2543 -42.629 60.476 169.340 1.00 82.60 O
ATOM 26 OP2 C B2543 -43.580 58.104 169.537 1.00 82.80 O
ATOM 27 O5' C B2543 -45.074 60.099 169.688 1.00 99.52 O
TER

Atoms:
OP1: (-51.942,46.293,164.157)
OP2: (-51.070,48.099,162.553)
C3': (-53.794,50.950,166.316)
C1': (-51.951,52.277,166.957)
C5': (-52.410,49.330,164.988)
O4': (-51.458,51.077,166.372)
C8: (-52.502,54.486,165.786)
O2': (-53.595,51.689,168.634)
C6: (-49.711,55.250,163.801)
C5: (-50.746,54.808,164.634)
C4: (-50.553,53.606,165.293)
P: (-51.017,47.421,163.877)
C4': (-52.535,50.110,166.266)
C2': (-53.433,52.065,167.280)
C2: (-48.568,53.337,164.399)
N1: (-48.612,54.476,163.703)
N3: (-49.472,52.813,165.216)
N6: (-49.754,56.384,163.106)
N7: (-51.982,55.351,164.951)
N9: (-51.687,53.404,166.047)
O5': (-51.240,48.514,165.010)
O3': (-54.890,50.169,166.731)
OP1: (-42.987,59.912,163.533)
OP2: (-42.568,58.282,161.591)
C3': (-45.047,58.671,167.003)
C1': (-47.262,58.726,166.145)
C5': (-44.049,57.653,164.877)
O4': (-46.381,58.296,165.119)
C8: (-49.488,57.626,166.681)
O2': (-46.411,60.679,167.297)
C6: (-48.730,54.412,167.857)
C5: (-48.875,55.709,167.354)
C4: (-47.720,56.365,166.968)
P: (-43.490,58.869,162.599)
C4': (-45.019,58.632,165.488)
C2': (-46.417,59.266,167.303)
C2: (-46.461,54.645,167.489)
N1: (-47.486,53.893,167.905)
N3: (-46.468,55.883,167.011)
N6: (-49.747,53.674,168.297)
N7: (-49.987,56.513,167.159)
N9: (-48.119,57.615,166.563)
O5': (-44.147,57.688,163.443)
O3': (-44.009,59.486,167.513)
Image (generated by PyMOL):
PyMOL image
show in jmol