Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:0235:0250
Extra
PDB:
ATOM 1 O3' G A 234 93.814 118.095 -7.708 1.00 64.79 O
ATOM 2 P A A 235 94.246 119.126 -8.859 1.00 64.86 P
ATOM 3 OP1 A A 235 93.717 118.588 -10.140 1.00 66.68 O
ATOM 4 OP2 A A 235 95.694 119.409 -8.724 1.00 64.12 O
ATOM 5 O5' A A 235 93.421 120.442 -8.519 1.00 63.20 O
ATOM 6 C5' A A 235 92.023 120.540 -8.850 1.00 62.71 C
ATOM 7 C4' A A 235 91.411 121.710 -8.129 1.00 63.23 C
ATOM 8 O4' A A 235 91.311 121.397 -6.712 1.00 62.65 O
ATOM 9 C3' A A 235 92.232 122.991 -8.220 1.00 63.70 C
ATOM 10 O3' A A 235 91.361 124.117 -8.176 1.00 64.63 O
ATOM 11 C2' A A 235 93.074 122.919 -6.950 1.00 62.92 C
ATOM 12 O2' A A 235 93.561 124.170 -6.515 1.00 63.59 O
ATOM 13 C1' A A 235 92.063 122.334 -5.968 1.00 62.79 C
ATOM 14 N9 A A 235 92.649 121.648 -4.818 1.00 63.10 N
ATOM 15 C8 A A 235 93.334 120.458 -4.795 1.00 64.06 C
ATOM 16 N7 A A 235 93.741 120.106 -3.600 1.00 63.74 N
ATOM 17 C5 A A 235 93.295 121.134 -2.781 1.00 62.77 C
ATOM 18 C6 A A 235 93.415 121.361 -1.402 1.00 61.24 C
ATOM 19 N6 A A 235 94.048 120.538 -0.570 1.00 61.47 N
ATOM 20 N1 A A 235 92.858 122.480 -0.901 1.00 60.33 N
ATOM 21 C2 A A 235 92.229 123.310 -1.735 1.00 62.05 C
ATOM 22 N3 A A 235 92.054 123.211 -3.048 1.00 62.84 N
ATOM 23 C4 A A 235 92.618 122.087 -3.516 1.00 62.83 C
ATOM 24 P A A 236 90.873 124.797 -9.545 1.00 65.59 P
ATOM 25 OP1 A A 236 91.964 124.578 -10.534 1.00 64.81 O
ATOM 26 OP2 A A 236 90.390 126.177 -9.273 1.00 66.33 O
ATOM 27 O5' A A 236 89.613 123.929 -9.981 1.00 63.22 O
TER
ATOM 1 O3' A B 249 95.189 123.606 3.771 1.00 51.67 O
ATOM 2 P A B 250 96.766 123.569 4.077 1.00 51.06 P
ATOM 3 OP1 A B 250 96.949 123.519 5.539 1.00 51.18 O
ATOM 4 OP2 A B 250 97.433 124.632 3.302 1.00 53.74 O
ATOM 5 O5' A B 250 97.236 122.161 3.502 1.00 53.44 O
ATOM 6 C5' A B 250 96.900 121.757 2.160 1.00 53.04 C
ATOM 7 C4' A B 250 97.679 120.518 1.777 1.00 53.27 C
ATOM 8 O4' A B 250 97.256 120.078 0.458 1.00 54.29 O
ATOM 9 C3' A B 250 99.191 120.687 1.686 1.00 52.25 C
ATOM 10 O3' A B 250 99.804 119.433 1.981 1.00 50.06 O
ATOM 11 C2' A B 250 99.382 121.032 0.212 1.00 53.57 C
ATOM 12 O2' A B 250 100.680 120.754 -0.271 1.00 54.13 O
ATOM 13 C1' A B 250 98.351 120.111 -0.434 1.00 54.37 C
ATOM 14 N9 A B 250 97.850 120.523 -1.747 1.00 56.36 N
ATOM 15 C8 A B 250 97.918 119.800 -2.913 1.00 57.01 C
ATOM 16 N7 A B 250 97.324 120.375 -3.929 1.00 56.60 N
ATOM 17 C5 A B 250 96.842 121.563 -3.404 1.00 56.64 C
ATOM 18 C6 A B 250 96.109 122.613 -3.975 1.00 57.28 C
ATOM 19 N6 A B 250 95.708 122.623 -5.246 1.00 57.76 N
ATOM 20 N1 A B 250 95.796 123.665 -3.186 1.00 58.24 N
ATOM 21 C2 A B 250 96.199 123.647 -1.907 1.00 58.53 C
ATOM 22 N3 A B 250 96.888 122.712 -1.252 1.00 57.89 N
ATOM 23 C4 A B 250 97.179 121.681 -2.067 1.00 57.05 C
ATOM 24 P U B 251 100.917 119.329 3.136 1.00 50.22 P
ATOM 25 OP1 U B 251 101.668 120.606 3.222 1.00 50.19 O
ATOM 26 OP2 U B 251 101.653 118.061 2.953 1.00 49.45 O
ATOM 27 O5' U B 251 100.073 119.210 4.473 1.00 51.76 O
TER
ATOM 2 P A A 235 94.246 119.126 -8.859 1.00 64.86 P
ATOM 3 OP1 A A 235 93.717 118.588 -10.140 1.00 66.68 O
ATOM 4 OP2 A A 235 95.694 119.409 -8.724 1.00 64.12 O
ATOM 5 O5' A A 235 93.421 120.442 -8.519 1.00 63.20 O
ATOM 6 C5' A A 235 92.023 120.540 -8.850 1.00 62.71 C
ATOM 7 C4' A A 235 91.411 121.710 -8.129 1.00 63.23 C
ATOM 8 O4' A A 235 91.311 121.397 -6.712 1.00 62.65 O
ATOM 9 C3' A A 235 92.232 122.991 -8.220 1.00 63.70 C
ATOM 10 O3' A A 235 91.361 124.117 -8.176 1.00 64.63 O
ATOM 11 C2' A A 235 93.074 122.919 -6.950 1.00 62.92 C
ATOM 12 O2' A A 235 93.561 124.170 -6.515 1.00 63.59 O
ATOM 13 C1' A A 235 92.063 122.334 -5.968 1.00 62.79 C
ATOM 14 N9 A A 235 92.649 121.648 -4.818 1.00 63.10 N
ATOM 15 C8 A A 235 93.334 120.458 -4.795 1.00 64.06 C
ATOM 16 N7 A A 235 93.741 120.106 -3.600 1.00 63.74 N
ATOM 17 C5 A A 235 93.295 121.134 -2.781 1.00 62.77 C
ATOM 18 C6 A A 235 93.415 121.361 -1.402 1.00 61.24 C
ATOM 19 N6 A A 235 94.048 120.538 -0.570 1.00 61.47 N
ATOM 20 N1 A A 235 92.858 122.480 -0.901 1.00 60.33 N
ATOM 21 C2 A A 235 92.229 123.310 -1.735 1.00 62.05 C
ATOM 22 N3 A A 235 92.054 123.211 -3.048 1.00 62.84 N
ATOM 23 C4 A A 235 92.618 122.087 -3.516 1.00 62.83 C
ATOM 24 P A A 236 90.873 124.797 -9.545 1.00 65.59 P
ATOM 25 OP1 A A 236 91.964 124.578 -10.534 1.00 64.81 O
ATOM 26 OP2 A A 236 90.390 126.177 -9.273 1.00 66.33 O
ATOM 27 O5' A A 236 89.613 123.929 -9.981 1.00 63.22 O
TER
ATOM 1 O3' A B 249 95.189 123.606 3.771 1.00 51.67 O
ATOM 2 P A B 250 96.766 123.569 4.077 1.00 51.06 P
ATOM 3 OP1 A B 250 96.949 123.519 5.539 1.00 51.18 O
ATOM 4 OP2 A B 250 97.433 124.632 3.302 1.00 53.74 O
ATOM 5 O5' A B 250 97.236 122.161 3.502 1.00 53.44 O
ATOM 6 C5' A B 250 96.900 121.757 2.160 1.00 53.04 C
ATOM 7 C4' A B 250 97.679 120.518 1.777 1.00 53.27 C
ATOM 8 O4' A B 250 97.256 120.078 0.458 1.00 54.29 O
ATOM 9 C3' A B 250 99.191 120.687 1.686 1.00 52.25 C
ATOM 10 O3' A B 250 99.804 119.433 1.981 1.00 50.06 O
ATOM 11 C2' A B 250 99.382 121.032 0.212 1.00 53.57 C
ATOM 12 O2' A B 250 100.680 120.754 -0.271 1.00 54.13 O
ATOM 13 C1' A B 250 98.351 120.111 -0.434 1.00 54.37 C
ATOM 14 N9 A B 250 97.850 120.523 -1.747 1.00 56.36 N
ATOM 15 C8 A B 250 97.918 119.800 -2.913 1.00 57.01 C
ATOM 16 N7 A B 250 97.324 120.375 -3.929 1.00 56.60 N
ATOM 17 C5 A B 250 96.842 121.563 -3.404 1.00 56.64 C
ATOM 18 C6 A B 250 96.109 122.613 -3.975 1.00 57.28 C
ATOM 19 N6 A B 250 95.708 122.623 -5.246 1.00 57.76 N
ATOM 20 N1 A B 250 95.796 123.665 -3.186 1.00 58.24 N
ATOM 21 C2 A B 250 96.199 123.647 -1.907 1.00 58.53 C
ATOM 22 N3 A B 250 96.888 122.712 -1.252 1.00 57.89 N
ATOM 23 C4 A B 250 97.179 121.681 -2.067 1.00 57.05 C
ATOM 24 P U B 251 100.917 119.329 3.136 1.00 50.22 P
ATOM 25 OP1 U B 251 101.668 120.606 3.222 1.00 50.19 O
ATOM 26 OP2 U B 251 101.653 118.061 2.953 1.00 49.45 O
ATOM 27 O5' U B 251 100.073 119.210 4.473 1.00 51.76 O
TER
Atoms:
OP1: (93.717,118.588,-10.140)
OP2: (95.694,119.409,-8.724)
C3': (92.232,122.991,-8.220)
C1': (92.063,122.334,-5.968)
C5': (92.023,120.540,-8.850)
O4': (91.311,121.397,-6.712)
C8: (93.334,120.458,-4.795)
O2': (93.561,124.170,-6.515)
C6: (93.415,121.361,-1.402)
C5: (93.295,121.134,-2.781)
C4: (92.618,122.087,-3.516)
P: (94.246,119.126,-8.859)
C4': (91.411,121.710,-8.129)
C2': (93.074,122.919,-6.950)
C2: (92.229,123.310,-1.735)
N1: (92.858,122.480,-0.901)
N3: (92.054,123.211,-3.048)
N6: (94.048,120.538,-0.570)
N7: (93.741,120.106,-3.600)
N9: (92.649,121.648,-4.818)
O5': (93.421,120.442,-8.519)
O3': (91.361,124.117,-8.176)
OP2: (95.694,119.409,-8.724)
C3': (92.232,122.991,-8.220)
C1': (92.063,122.334,-5.968)
C5': (92.023,120.540,-8.850)
O4': (91.311,121.397,-6.712)
C8: (93.334,120.458,-4.795)
O2': (93.561,124.170,-6.515)
C6: (93.415,121.361,-1.402)
C5: (93.295,121.134,-2.781)
C4: (92.618,122.087,-3.516)
P: (94.246,119.126,-8.859)
C4': (91.411,121.710,-8.129)
C2': (93.074,122.919,-6.950)
C2: (92.229,123.310,-1.735)
N1: (92.858,122.480,-0.901)
N3: (92.054,123.211,-3.048)
N6: (94.048,120.538,-0.570)
N7: (93.741,120.106,-3.600)
N9: (92.649,121.648,-4.818)
O5': (93.421,120.442,-8.519)
O3': (91.361,124.117,-8.176)
OP1: (96.949,123.519,5.539)
OP2: (97.433,124.632,3.302)
C3': (99.191,120.687,1.686)
C1': (98.351,120.111,-0.434)
C5': (96.900,121.757,2.160)
O4': (97.256,120.078,0.458)
C8: (97.918,119.800,-2.913)
O2': (100.680,120.754,-0.271)
C6: (96.109,122.613,-3.975)
C5: (96.842,121.563,-3.404)
C4: (97.179,121.681,-2.067)
P: (96.766,123.569,4.077)
C4': (97.679,120.518,1.777)
C2': (99.382,121.032,0.212)
C2: (96.199,123.647,-1.907)
N1: (95.796,123.665,-3.186)
N3: (96.888,122.712,-1.252)
N6: (95.708,122.623,-5.246)
N7: (97.324,120.375,-3.929)
N9: (97.850,120.523,-1.747)
O5': (97.236,122.161,3.502)
O3': (99.804,119.433,1.981)
OP2: (97.433,124.632,3.302)
C3': (99.191,120.687,1.686)
C1': (98.351,120.111,-0.434)
C5': (96.900,121.757,2.160)
O4': (97.256,120.078,0.458)
C8: (97.918,119.800,-2.913)
O2': (100.680,120.754,-0.271)
C6: (96.109,122.613,-3.975)
C5: (96.842,121.563,-3.404)
C4: (97.179,121.681,-2.067)
P: (96.766,123.569,4.077)
C4': (97.679,120.518,1.777)
C2': (99.382,121.032,0.212)
C2: (96.199,123.647,-1.907)
N1: (95.796,123.665,-3.186)
N3: (96.888,122.712,-1.252)
N6: (95.708,122.623,-5.246)
N7: (97.324,120.375,-3.929)
N9: (97.850,120.523,-1.747)
O5': (97.236,122.161,3.502)
O3': (99.804,119.433,1.981)
Image (generated by PyMOL):