ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CC4:0235:0250

Extra

PDB:
ATOM 1 O3' G A 234 93.791 117.643 -7.878 1.00 57.11 O
ATOM 2 P A A 235 94.296 118.664 -9.008 1.00 55.88 P
ATOM 3 OP1 A A 235 93.803 118.128 -10.303 1.00 56.87 O
ATOM 4 OP2 A A 235 95.750 118.901 -8.813 1.00 54.03 O
ATOM 5 O5' A A 235 93.492 120.003 -8.710 1.00 55.04 O
ATOM 6 C5' A A 235 92.099 120.129 -9.073 1.00 55.72 C
ATOM 7 C4' A A 235 91.487 121.310 -8.359 1.00 56.24 C
ATOM 8 O4' A A 235 91.348 121.010 -6.940 1.00 55.88 O
ATOM 9 C3' A A 235 92.323 122.582 -8.437 1.00 55.28 C
ATOM 10 O3' A A 235 91.466 123.710 -8.386 1.00 55.23 O
ATOM 11 C2' A A 235 93.143 122.500 -7.157 1.00 55.38 C
ATOM 12 O2' A A 235 93.649 123.742 -6.720 1.00 55.21 O
ATOM 13 C1' A A 235 92.106 121.935 -6.188 1.00 56.03 C
ATOM 14 N9 A A 235 92.687 121.235 -5.044 1.00 56.67 N
ATOM 15 C8 A A 235 93.407 120.064 -5.036 1.00 56.84 C
ATOM 16 N7 A A 235 93.817 119.705 -3.844 1.00 56.27 N
ATOM 17 C5 A A 235 93.328 120.702 -3.009 1.00 56.38 C
ATOM 18 C6 A A 235 93.426 120.907 -1.623 1.00 54.76 C
ATOM 19 N6 A A 235 94.073 120.085 -0.796 1.00 53.10 N
ATOM 20 N1 A A 235 92.832 122.003 -1.108 1.00 53.71 N
ATOM 21 C2 A A 235 92.185 122.829 -1.936 1.00 54.91 C
ATOM 22 N3 A A 235 92.022 122.746 -3.252 1.00 55.82 N
ATOM 23 C4 A A 235 92.626 121.647 -3.735 1.00 56.22 C
ATOM 24 P A A 236 90.956 124.379 -9.750 1.00 55.58 P
ATOM 25 OP1 A A 236 92.042 124.191 -10.753 1.00 54.97 O
ATOM 26 OP2 A A 236 90.446 125.748 -9.451 1.00 55.11 O
ATOM 27 O5' A A 236 89.714 123.479 -10.179 1.00 53.62 O
TER

ATOM 1 O3' A B 249 95.167 123.078 3.516 1.00 43.95 O
ATOM 2 P A B 250 96.730 123.068 3.880 1.00 43.88 P
ATOM 3 OP1 A B 250 96.870 122.938 5.344 1.00 44.85 O
ATOM 4 OP2 A B 250 97.379 124.196 3.195 1.00 44.71 O
ATOM 5 O5' A B 250 97.267 121.708 3.250 1.00 44.43 O
ATOM 6 C5' A B 250 96.883 121.300 1.927 1.00 44.41 C
ATOM 7 C4' A B 250 97.638 120.052 1.532 1.00 46.40 C
ATOM 8 O4' A B 250 97.214 119.631 0.208 1.00 47.69 O
ATOM 9 C3' A B 250 99.150 120.205 1.449 1.00 46.14 C
ATOM 10 O3' A B 250 99.747 118.943 1.719 1.00 44.67 O
ATOM 11 C2' A B 250 99.356 120.555 -0.019 1.00 47.55 C
ATOM 12 O2' A B 250 100.649 120.240 -0.491 1.00 50.20 O
ATOM 13 C1' A B 250 98.317 119.654 -0.675 1.00 48.43 C
ATOM 14 N9 A B 250 97.840 120.105 -1.980 1.00 49.88 N
ATOM 15 C8 A B 250 97.966 119.450 -3.177 1.00 50.18 C
ATOM 16 N7 A B 250 97.377 120.059 -4.177 1.00 51.74 N
ATOM 17 C5 A B 250 96.838 121.201 -3.602 1.00 51.15 C
ATOM 18 C6 A B 250 96.080 122.261 -4.132 1.00 50.48 C
ATOM 19 N6 A B 250 95.713 122.339 -5.409 1.00 48.08 N
ATOM 20 N1 A B 250 95.708 123.249 -3.290 1.00 51.98 N
ATOM 21 C2 A B 250 96.076 123.166 -2.003 1.00 51.71 C
ATOM 22 N3 A B 250 96.782 122.219 -1.387 1.00 51.25 N
ATOM 23 C4 A B 250 97.134 121.253 -2.252 1.00 50.55 C
ATOM 24 P U B 251 100.866 118.813 2.862 1.00 46.12 P
ATOM 25 OP1 U B 251 101.624 120.083 2.966 1.00 45.29 O
ATOM 26 OP2 U B 251 101.597 117.542 2.648 1.00 44.45 O
ATOM 27 O5' U B 251 100.011 118.686 4.193 1.00 45.75 O
TER

Atoms:
OP1: (93.803,118.128,-10.303)
OP2: (95.750,118.901,-8.813)
C3': (92.323,122.582,-8.437)
C1': (92.106,121.935,-6.188)
C5': (92.099,120.129,-9.073)
O4': (91.348,121.010,-6.940)
C8: (93.407,120.064,-5.036)
O2': (93.649,123.742,-6.720)
C6: (93.426,120.907,-1.623)
C5: (93.328,120.702,-3.009)
C4: (92.626,121.647,-3.735)
P: (94.296,118.664,-9.008)
C4': (91.487,121.310,-8.359)
C2': (93.143,122.500,-7.157)
C2: (92.185,122.829,-1.936)
N1: (92.832,122.003,-1.108)
N3: (92.022,122.746,-3.252)
N6: (94.073,120.085,-0.796)
N7: (93.817,119.705,-3.844)
N9: (92.687,121.235,-5.044)
O5': (93.492,120.003,-8.710)
O3': (91.466,123.710,-8.386)
OP1: (96.870,122.938,5.344)
OP2: (97.379,124.196,3.195)
C3': (99.150,120.205,1.449)
C1': (98.317,119.654,-0.675)
C5': (96.883,121.300,1.927)
O4': (97.214,119.631,0.208)
C8: (97.966,119.450,-3.177)
O2': (100.649,120.240,-0.491)
C6: (96.080,122.261,-4.132)
C5: (96.838,121.201,-3.602)
C4: (97.134,121.253,-2.252)
P: (96.730,123.068,3.880)
C4': (97.638,120.052,1.532)
C2': (99.356,120.555,-0.019)
C2: (96.076,123.166,-2.003)
N1: (95.708,123.249,-3.290)
N3: (96.782,122.219,-1.387)
N6: (95.713,122.339,-5.409)
N7: (97.377,120.059,-4.177)
N9: (97.840,120.105,-1.980)
O5': (97.267,121.708,3.250)
O3': (99.747,118.943,1.719)
Image (generated by PyMOL):
PyMOL image
show in jmol