Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCV:0235:0250
Extra
PDB:
ATOM 1 O3' G A 234 93.472 117.657 -7.817 1.00 57.00 O
ATOM 2 P A A 235 94.045 118.693 -8.903 1.00 55.76 P
ATOM 3 OP1 A A 235 93.634 118.185 -10.237 1.00 56.26 O
ATOM 4 OP2 A A 235 95.484 118.943 -8.619 1.00 54.15 O
ATOM 5 O5' A A 235 93.213 120.019 -8.634 1.00 54.33 O
ATOM 6 C5' A A 235 91.809 120.083 -8.947 1.00 54.49 C
ATOM 7 C4' A A 235 91.185 121.252 -8.234 1.00 55.12 C
ATOM 8 O4' A A 235 91.088 120.964 -6.809 1.00 54.48 O
ATOM 9 C3' A A 235 92.009 122.528 -8.341 1.00 54.44 C
ATOM 10 O3' A A 235 91.143 123.637 -8.240 1.00 54.43 O
ATOM 11 C2' A A 235 92.864 122.462 -7.087 1.00 54.71 C
ATOM 12 O2' A A 235 93.375 123.712 -6.677 1.00 54.00 O
ATOM 13 C1' A A 235 91.851 121.910 -6.088 1.00 54.56 C
ATOM 14 N9 A A 235 92.469 121.237 -4.953 1.00 54.83 N
ATOM 15 C8 A A 235 93.239 120.103 -4.954 1.00 55.76 C
ATOM 16 N7 A A 235 93.674 119.760 -3.768 1.00 56.11 N
ATOM 17 C5 A A 235 93.148 120.732 -2.929 1.00 55.00 C
ATOM 18 C6 A A 235 93.249 120.937 -1.553 1.00 54.35 C
ATOM 19 N6 A A 235 93.954 120.151 -0.742 1.00 55.34 N
ATOM 20 N1 A A 235 92.599 121.996 -1.028 1.00 54.38 N
ATOM 21 C2 A A 235 91.905 122.792 -1.846 1.00 54.73 C
ATOM 22 N3 A A 235 91.741 122.707 -3.158 1.00 54.95 N
ATOM 23 C4 A A 235 92.397 121.641 -3.645 1.00 55.24 C
ATOM 24 P A A 236 90.702 124.407 -9.564 1.00 54.91 P
ATOM 25 OP1 A A 236 91.803 124.179 -10.538 1.00 54.67 O
ATOM 26 OP2 A A 236 90.306 125.791 -9.198 1.00 55.23 O
ATOM 27 O5' A A 236 89.407 123.623 -10.054 1.00 53.66 O
TER
ATOM 1 O3' A B 249 94.936 123.051 3.573 1.00 42.78 O
ATOM 2 P A B 250 96.494 123.049 3.961 1.00 42.58 P
ATOM 3 OP1 A B 250 96.604 122.954 5.433 1.00 41.77 O
ATOM 4 OP2 A B 250 97.144 124.170 3.266 1.00 44.71 O
ATOM 5 O5' A B 250 97.034 121.685 3.338 1.00 42.94 O
ATOM 6 C5' A B 250 96.604 121.245 2.035 1.00 41.86 C
ATOM 7 C4' A B 250 97.392 120.026 1.609 1.00 42.88 C
ATOM 8 O4' A B 250 96.964 119.630 0.277 1.00 43.73 O
ATOM 9 C3' A B 250 98.898 120.232 1.507 1.00 42.27 C
ATOM 10 O3' A B 250 99.554 118.987 1.724 1.00 40.92 O
ATOM 11 C2' A B 250 99.063 120.637 0.048 1.00 43.67 C
ATOM 12 O2' A B 250 100.367 120.428 -0.454 1.00 43.44 O
ATOM 13 C1' A B 250 98.059 119.702 -0.616 1.00 45.00 C
ATOM 14 N9 A B 250 97.561 120.145 -1.918 1.00 47.41 N
ATOM 15 C8 A B 250 97.648 119.463 -3.107 1.00 48.04 C
ATOM 16 N7 A B 250 97.069 120.075 -4.112 1.00 49.27 N
ATOM 17 C5 A B 250 96.577 121.245 -3.553 1.00 48.49 C
ATOM 18 C6 A B 250 95.853 122.320 -4.099 1.00 48.07 C
ATOM 19 N6 A B 250 95.483 122.387 -5.378 1.00 46.83 N
ATOM 20 N1 A B 250 95.517 123.336 -3.272 1.00 48.94 N
ATOM 21 C2 A B 250 95.889 123.264 -1.984 1.00 49.37 C
ATOM 22 N3 A B 250 96.570 122.304 -1.352 1.00 49.31 N
ATOM 23 C4 A B 250 96.885 121.310 -2.203 1.00 48.84 C
ATOM 24 P U B 251 100.603 118.830 2.931 1.00 41.94 P
ATOM 25 OP1 U B 251 101.370 120.091 3.083 1.00 41.36 O
ATOM 26 OP2 U B 251 101.327 117.548 2.770 1.00 40.14 O
ATOM 27 O5' U B 251 99.674 118.707 4.211 1.00 42.54 O
TER
ATOM 2 P A A 235 94.045 118.693 -8.903 1.00 55.76 P
ATOM 3 OP1 A A 235 93.634 118.185 -10.237 1.00 56.26 O
ATOM 4 OP2 A A 235 95.484 118.943 -8.619 1.00 54.15 O
ATOM 5 O5' A A 235 93.213 120.019 -8.634 1.00 54.33 O
ATOM 6 C5' A A 235 91.809 120.083 -8.947 1.00 54.49 C
ATOM 7 C4' A A 235 91.185 121.252 -8.234 1.00 55.12 C
ATOM 8 O4' A A 235 91.088 120.964 -6.809 1.00 54.48 O
ATOM 9 C3' A A 235 92.009 122.528 -8.341 1.00 54.44 C
ATOM 10 O3' A A 235 91.143 123.637 -8.240 1.00 54.43 O
ATOM 11 C2' A A 235 92.864 122.462 -7.087 1.00 54.71 C
ATOM 12 O2' A A 235 93.375 123.712 -6.677 1.00 54.00 O
ATOM 13 C1' A A 235 91.851 121.910 -6.088 1.00 54.56 C
ATOM 14 N9 A A 235 92.469 121.237 -4.953 1.00 54.83 N
ATOM 15 C8 A A 235 93.239 120.103 -4.954 1.00 55.76 C
ATOM 16 N7 A A 235 93.674 119.760 -3.768 1.00 56.11 N
ATOM 17 C5 A A 235 93.148 120.732 -2.929 1.00 55.00 C
ATOM 18 C6 A A 235 93.249 120.937 -1.553 1.00 54.35 C
ATOM 19 N6 A A 235 93.954 120.151 -0.742 1.00 55.34 N
ATOM 20 N1 A A 235 92.599 121.996 -1.028 1.00 54.38 N
ATOM 21 C2 A A 235 91.905 122.792 -1.846 1.00 54.73 C
ATOM 22 N3 A A 235 91.741 122.707 -3.158 1.00 54.95 N
ATOM 23 C4 A A 235 92.397 121.641 -3.645 1.00 55.24 C
ATOM 24 P A A 236 90.702 124.407 -9.564 1.00 54.91 P
ATOM 25 OP1 A A 236 91.803 124.179 -10.538 1.00 54.67 O
ATOM 26 OP2 A A 236 90.306 125.791 -9.198 1.00 55.23 O
ATOM 27 O5' A A 236 89.407 123.623 -10.054 1.00 53.66 O
TER
ATOM 1 O3' A B 249 94.936 123.051 3.573 1.00 42.78 O
ATOM 2 P A B 250 96.494 123.049 3.961 1.00 42.58 P
ATOM 3 OP1 A B 250 96.604 122.954 5.433 1.00 41.77 O
ATOM 4 OP2 A B 250 97.144 124.170 3.266 1.00 44.71 O
ATOM 5 O5' A B 250 97.034 121.685 3.338 1.00 42.94 O
ATOM 6 C5' A B 250 96.604 121.245 2.035 1.00 41.86 C
ATOM 7 C4' A B 250 97.392 120.026 1.609 1.00 42.88 C
ATOM 8 O4' A B 250 96.964 119.630 0.277 1.00 43.73 O
ATOM 9 C3' A B 250 98.898 120.232 1.507 1.00 42.27 C
ATOM 10 O3' A B 250 99.554 118.987 1.724 1.00 40.92 O
ATOM 11 C2' A B 250 99.063 120.637 0.048 1.00 43.67 C
ATOM 12 O2' A B 250 100.367 120.428 -0.454 1.00 43.44 O
ATOM 13 C1' A B 250 98.059 119.702 -0.616 1.00 45.00 C
ATOM 14 N9 A B 250 97.561 120.145 -1.918 1.00 47.41 N
ATOM 15 C8 A B 250 97.648 119.463 -3.107 1.00 48.04 C
ATOM 16 N7 A B 250 97.069 120.075 -4.112 1.00 49.27 N
ATOM 17 C5 A B 250 96.577 121.245 -3.553 1.00 48.49 C
ATOM 18 C6 A B 250 95.853 122.320 -4.099 1.00 48.07 C
ATOM 19 N6 A B 250 95.483 122.387 -5.378 1.00 46.83 N
ATOM 20 N1 A B 250 95.517 123.336 -3.272 1.00 48.94 N
ATOM 21 C2 A B 250 95.889 123.264 -1.984 1.00 49.37 C
ATOM 22 N3 A B 250 96.570 122.304 -1.352 1.00 49.31 N
ATOM 23 C4 A B 250 96.885 121.310 -2.203 1.00 48.84 C
ATOM 24 P U B 251 100.603 118.830 2.931 1.00 41.94 P
ATOM 25 OP1 U B 251 101.370 120.091 3.083 1.00 41.36 O
ATOM 26 OP2 U B 251 101.327 117.548 2.770 1.00 40.14 O
ATOM 27 O5' U B 251 99.674 118.707 4.211 1.00 42.54 O
TER
Atoms:
OP1: (93.634,118.185,-10.237)
OP2: (95.484,118.943,-8.619)
C3': (92.009,122.528,-8.341)
C1': (91.851,121.910,-6.088)
C5': (91.809,120.083,-8.947)
O4': (91.088,120.964,-6.809)
C8: (93.239,120.103,-4.954)
O2': (93.375,123.712,-6.677)
C6: (93.249,120.937,-1.553)
C5: (93.148,120.732,-2.929)
C4: (92.397,121.641,-3.645)
P: (94.045,118.693,-8.903)
C4': (91.185,121.252,-8.234)
C2': (92.864,122.462,-7.087)
C2: (91.905,122.792,-1.846)
N1: (92.599,121.996,-1.028)
N3: (91.741,122.707,-3.158)
N6: (93.954,120.151,-0.742)
N7: (93.674,119.760,-3.768)
N9: (92.469,121.237,-4.953)
O5': (93.213,120.019,-8.634)
O3': (91.143,123.637,-8.240)
OP2: (95.484,118.943,-8.619)
C3': (92.009,122.528,-8.341)
C1': (91.851,121.910,-6.088)
C5': (91.809,120.083,-8.947)
O4': (91.088,120.964,-6.809)
C8: (93.239,120.103,-4.954)
O2': (93.375,123.712,-6.677)
C6: (93.249,120.937,-1.553)
C5: (93.148,120.732,-2.929)
C4: (92.397,121.641,-3.645)
P: (94.045,118.693,-8.903)
C4': (91.185,121.252,-8.234)
C2': (92.864,122.462,-7.087)
C2: (91.905,122.792,-1.846)
N1: (92.599,121.996,-1.028)
N3: (91.741,122.707,-3.158)
N6: (93.954,120.151,-0.742)
N7: (93.674,119.760,-3.768)
N9: (92.469,121.237,-4.953)
O5': (93.213,120.019,-8.634)
O3': (91.143,123.637,-8.240)
OP1: (96.604,122.954,5.433)
OP2: (97.144,124.170,3.266)
C3': (98.898,120.232,1.507)
C1': (98.059,119.702,-0.616)
C5': (96.604,121.245,2.035)
O4': (96.964,119.630,0.277)
C8: (97.648,119.463,-3.107)
O2': (100.367,120.428,-0.454)
C6: (95.853,122.320,-4.099)
C5: (96.577,121.245,-3.553)
C4: (96.885,121.310,-2.203)
P: (96.494,123.049,3.961)
C4': (97.392,120.026,1.609)
C2': (99.063,120.637,0.048)
C2: (95.889,123.264,-1.984)
N1: (95.517,123.336,-3.272)
N3: (96.570,122.304,-1.352)
N6: (95.483,122.387,-5.378)
N7: (97.069,120.075,-4.112)
N9: (97.561,120.145,-1.918)
O5': (97.034,121.685,3.338)
O3': (99.554,118.987,1.724)
OP2: (97.144,124.170,3.266)
C3': (98.898,120.232,1.507)
C1': (98.059,119.702,-0.616)
C5': (96.604,121.245,2.035)
O4': (96.964,119.630,0.277)
C8: (97.648,119.463,-3.107)
O2': (100.367,120.428,-0.454)
C6: (95.853,122.320,-4.099)
C5: (96.577,121.245,-3.553)
C4: (96.885,121.310,-2.203)
P: (96.494,123.049,3.961)
C4': (97.392,120.026,1.609)
C2': (99.063,120.637,0.048)
C2: (95.889,123.264,-1.984)
N1: (95.517,123.336,-3.272)
N3: (96.570,122.304,-1.352)
N6: (95.483,122.387,-5.378)
N7: (97.069,120.075,-4.112)
N9: (97.561,120.145,-1.918)
O5': (97.034,121.685,3.338)
O3': (99.554,118.987,1.724)
Image (generated by PyMOL):