ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2TRA:A20:A45

Extra

PDB:
ATOM 1 O3' C A 19 2.460 17.057 7.131 0.40 49.91 O
ATOM 2 P A A 20 1.488 16.531 5.950 1.00 44.90 P
ATOM 3 OP1 A A 20 0.234 17.354 5.860 1.00 33.90 O
ATOM 4 OP2 A A 20 1.273 15.086 6.204 1.00 37.44 O
ATOM 5 O5' A A 20 2.349 16.760 4.620 1.00 30.95 O
ATOM 6 C5' A A 20 3.173 17.941 4.709 1.00 26.48 C
ATOM 7 C4' A A 20 4.526 17.665 4.126 1.00 21.88 C
ATOM 8 O4' A A 20 5.332 16.841 5.023 1.00 15.36 O
ATOM 9 C3' A A 20 4.594 16.922 2.796 1.00 23.34 C
ATOM 10 O3' A A 20 4.391 17.779 1.674 1.00 16.40 O
ATOM 11 C2' A A 20 6.002 16.335 2.811 1.00 16.77 C
ATOM 12 O2' A A 20 6.845 17.395 2.347 1.00 11.58 O
ATOM 13 C1' A A 20 6.230 16.018 4.261 1.00 11.42 C
ATOM 14 N9 A A 20 5.898 14.614 4.530 1.00 15.79 N
ATOM 15 C8 A A 20 4.637 14.114 4.799 1.00 17.39 C
ATOM 16 N7 A A 20 4.619 12.825 5.053 1.00 14.74 N
ATOM 17 C5 A A 20 5.959 12.454 4.933 1.00 14.52 C
ATOM 18 C6 A A 20 6.593 11.205 5.098 1.00 16.42 C
ATOM 19 N6 A A 20 5.959 10.078 5.397 1.00 22.36 N
ATOM 20 N1 A A 20 7.946 11.219 4.919 1.00 17.30 N
ATOM 21 C2 A A 20 8.598 12.366 4.590 1.00 23.49 C
ATOM 22 N3 A A 20 8.069 13.574 4.455 1.00 21.57 N
ATOM 23 C4 A A 20 6.740 13.547 4.635 1.00 16.00 C
ATOM 24 P G A 21 3.795 17.253 0.299 1.00 9.57 P
ATOM 25 OP1 G A 21 2.374 17.705 0.120 1.00 20.12 O
ATOM 26 OP2 G A 21 3.838 15.775 0.404 1.00 21.29 O
ATOM 27 O5' G A 21 4.772 17.948 -0.762 1.00 3.66 O
TER

ATOM 1 O3' G B 44 2.282 6.008 -0.239 1.00 4.71 O
ATOM 2 P A B 45 1.937 6.494 1.256 1.00 1.00 P
ATOM 3 OP1 A B 45 1.279 5.407 2.048 1.00 1.00 O
ATOM 4 OP2 A B 45 1.101 7.702 1.106 1.00 11.43 O
ATOM 5 O5' A B 45 3.327 6.872 1.914 1.00 1.00 O
ATOM 6 C5' A B 45 3.807 5.731 2.721 1.00 1.00 C
ATOM 7 C4' A B 45 5.301 5.798 2.526 1.00 1.00 C
ATOM 8 O4' A B 45 5.615 6.541 1.375 1.00 1.00 O
ATOM 9 C3' A B 45 6.039 6.534 3.648 1.00 1.00 C
ATOM 10 O3' A B 45 6.285 5.731 4.799 1.00 1.58 O
ATOM 11 C2' A B 45 7.319 6.993 2.960 1.00 1.00 C
ATOM 12 O2' A B 45 8.204 5.872 2.990 1.00 1.00 O
ATOM 13 C1' A B 45 6.814 7.290 1.585 1.00 1.00 C
ATOM 14 N9 A B 45 6.464 8.714 1.465 1.00 1.00 N
ATOM 15 C8 A B 45 5.227 9.254 1.749 1.00 1.00 C
ATOM 16 N7 A B 45 5.178 10.550 1.570 1.00 1.00 N
ATOM 17 C5 A B 45 6.451 10.881 1.136 1.00 1.00 C
ATOM 18 C6 A B 45 7.023 12.123 0.762 1.00 1.00 C
ATOM 19 N6 A B 45 6.378 13.277 0.777 1.00 7.21 N
ATOM 20 N1 A B 45 8.327 12.062 0.374 1.00 1.00 N
ATOM 21 C2 A B 45 9.010 10.894 0.359 1.00 1.00 C
ATOM 22 N3 A B 45 8.530 9.700 0.703 1.00 1.00 N
ATOM 23 C4 A B 45 7.245 9.760 1.076 1.00 1.00 C
ATOM 24 P U B 46 5.529 5.987 6.189 1.00 1.00 P
ATOM 25 OP1 U B 46 5.498 4.664 6.907 1.00 1.51 O
ATOM 26 OP2 U B 46 4.151 6.453 5.920 1.00 1.00 O
ATOM 27 O5' U B 46 6.433 7.108 6.847 1.00 1.00 O
TER

Atoms:
OP1: (0.234,17.354,5.860)
OP2: (1.273,15.086,6.204)
C3': (4.594,16.922,2.796)
C1': (6.230,16.018,4.261)
C5': (3.173,17.941,4.709)
O4': (5.332,16.841,5.023)
C8: (4.637,14.114,4.799)
O2': (6.845,17.395,2.347)
C6: (6.593,11.205,5.098)
C5: (5.959,12.454,4.933)
C4: (6.740,13.547,4.635)
P: (1.488,16.531,5.950)
C4': (4.526,17.665,4.126)
C2': (6.002,16.335,2.811)
C2: (8.598,12.366,4.590)
N1: (7.946,11.219,4.919)
N3: (8.069,13.574,4.455)
N6: (5.959,10.078,5.397)
N7: (4.619,12.825,5.053)
N9: (5.898,14.614,4.530)
O5': (2.349,16.760,4.620)
O3': (4.391,17.779,1.674)
OP1: (1.279,5.407,2.048)
OP2: (1.101,7.702,1.106)
C3': (6.039,6.534,3.648)
C1': (6.814,7.290,1.585)
C5': (3.807,5.731,2.721)
O4': (5.615,6.541,1.375)
C8: (5.227,9.254,1.749)
O2': (8.204,5.872,2.990)
C6: (7.023,12.123,0.762)
C5: (6.451,10.881,1.136)
C4: (7.245,9.760,1.076)
P: (1.937,6.494,1.256)
C4': (5.301,5.798,2.526)
C2': (7.319,6.993,2.960)
C2: (9.010,10.894,0.359)
N1: (8.327,12.062,0.374)
N3: (8.530,9.700,0.703)
N6: (6.378,13.277,0.777)
N7: (5.178,10.550,1.570)
N9: (6.464,8.714,1.465)
O5': (3.327,6.872,1.914)
O3': (6.285,5.731,4.799)
Image (generated by PyMOL):
PyMOL image
show in jmol