ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3Q3Z:V11:V50

Extra

PDB:
ATOM 1 O3' A A 10 3.325 -2.148 29.503 1.00 55.95 O
ATOM 2 P A A 11 3.724 -2.878 30.867 1.00 60.45 P
ATOM 3 OP1 A A 11 3.411 -4.316 30.698 1.00 58.40 O
ATOM 4 OP2 A A 11 3.171 -2.124 32.012 1.00 57.83 O
ATOM 5 O5' A A 11 5.309 -2.687 30.887 1.00 60.98 O
ATOM 6 C5' A A 11 5.883 -1.389 30.777 1.00 59.11 C
ATOM 7 C4' A A 11 7.388 -1.478 30.948 1.00 63.41 C
ATOM 8 O4' A A 11 8.024 -0.236 30.538 1.00 59.92 O
ATOM 9 C3' A A 11 7.862 -1.711 32.377 1.00 60.18 C
ATOM 10 O3' A A 11 9.084 -2.447 32.355 1.00 63.09 O
ATOM 11 C2' A A 11 8.071 -0.285 32.870 1.00 63.28 C
ATOM 12 O2' A A 11 8.900 -0.209 34.018 1.00 64.63 O
ATOM 13 C1' A A 11 8.740 0.309 31.630 1.00 59.16 C
ATOM 14 N9 A A 11 8.705 1.760 31.477 1.00 60.43 N
ATOM 15 C8 A A 11 9.780 2.598 31.388 1.00 61.35 C
ATOM 16 N7 A A 11 9.457 3.859 31.228 1.00 59.91 N
ATOM 17 C5 A A 11 8.075 3.849 31.204 1.00 52.49 C
ATOM 18 C6 A A 11 7.117 4.877 31.061 1.00 53.97 C
ATOM 19 N6 A A 11 7.440 6.165 30.909 1.00 54.07 N
ATOM 20 N1 A A 11 5.809 4.528 31.076 1.00 52.09 N
ATOM 21 C2 A A 11 5.492 3.230 31.230 1.00 57.99 C
ATOM 22 N3 A A 11 6.305 2.175 31.373 1.00 54.02 N
ATOM 23 C4 A A 11 7.594 2.558 31.351 1.00 56.56 C
ATOM 24 P U A 12 9.287 -3.832 33.123 1.00 61.40 P
ATOM 25 OP1 U A 12 8.570 -3.776 34.418 1.00 59.38 O
ATOM 26 OP2 U A 12 10.737 -4.122 33.100 1.00 63.95 O
ATOM 27 O5' U A 12 8.551 -4.880 32.155 1.00 63.62 O
TER

ATOM 1 O3' G B 49 10.768 8.188 26.442 1.00 56.41 O
ATOM 2 P A B 50 10.532 9.627 27.097 1.00 67.15 P
ATOM 3 OP1 A B 50 10.901 10.681 26.117 1.00 59.00 O
ATOM 4 OP2 A B 50 11.163 9.603 28.435 1.00 61.19 O
ATOM 5 O5' A B 50 8.952 9.643 27.311 1.00 63.98 O
ATOM 6 C5' A B 50 8.055 10.032 26.279 1.00 57.51 C
ATOM 7 C4' A B 50 6.643 9.627 26.657 1.00 56.20 C
ATOM 8 O4' A B 50 6.484 8.200 26.442 1.00 52.92 O
ATOM 9 C3' A B 50 6.283 9.866 28.124 1.00 56.22 C
ATOM 10 O3' A B 50 4.925 10.248 28.263 1.00 57.88 O
ATOM 11 C2' A B 50 6.526 8.507 28.764 1.00 58.58 C
ATOM 12 O2' A B 50 5.787 8.318 29.955 1.00 59.03 O
ATOM 13 C1' A B 50 6.041 7.599 27.639 1.00 56.56 C
ATOM 14 N9 A B 50 6.556 6.238 27.684 1.00 57.27 N
ATOM 15 C8 A B 50 7.853 5.830 27.578 1.00 57.52 C
ATOM 16 N7 A B 50 8.003 4.526 27.652 1.00 54.70 N
ATOM 17 C5 A B 50 6.713 4.052 27.812 1.00 53.40 C
ATOM 18 C6 A B 50 6.180 2.753 27.953 1.00 54.76 C
ATOM 19 N6 A B 50 6.916 1.640 27.955 1.00 50.57 N
ATOM 20 N1 A B 50 4.844 2.641 28.094 1.00 62.05 N
ATOM 21 C2 A B 50 4.091 3.750 28.097 1.00 56.93 C
ATOM 22 N3 A B 50 4.477 5.017 27.971 1.00 57.22 N
ATOM 23 C4 A B 50 5.811 5.097 27.834 1.00 56.29 C
ATOM 24 P G B 51 4.434 11.753 28.019 1.00 58.56 P
ATOM 25 OP1 G B 51 5.582 12.680 28.193 1.00 61.93 O
ATOM 26 OP2 G B 51 3.203 11.928 28.821 1.00 55.46 O
ATOM 27 O5' G B 51 4.032 11.752 26.479 1.00 53.05 O
TER

Atoms:
OP1: (3.411,-4.316,30.698)
OP2: (3.171,-2.124,32.012)
C3': (7.862,-1.711,32.377)
C1': (8.740,0.309,31.630)
C5': (5.883,-1.389,30.777)
O4': (8.024,-0.236,30.538)
C8: (9.780,2.598,31.388)
O2': (8.900,-0.209,34.018)
C6: (7.117,4.877,31.061)
C5: (8.075,3.849,31.204)
C4: (7.594,2.558,31.351)
P: (3.724,-2.878,30.867)
C4': (7.388,-1.478,30.948)
C2': (8.071,-0.285,32.870)
C2: (5.492,3.230,31.230)
N1: (5.809,4.528,31.076)
N3: (6.305,2.175,31.373)
N6: (7.440,6.165,30.909)
N7: (9.457,3.859,31.228)
N9: (8.705,1.760,31.477)
O5': (5.309,-2.687,30.887)
O3': (9.084,-2.447,32.355)
OP1: (10.901,10.681,26.117)
OP2: (11.163,9.603,28.435)
C3': (6.283,9.866,28.124)
C1': (6.041,7.599,27.639)
C5': (8.055,10.032,26.279)
O4': (6.484,8.200,26.442)
C8: (7.853,5.830,27.578)
O2': (5.787,8.318,29.955)
C6: (6.180,2.753,27.953)
C5: (6.713,4.052,27.812)
C4: (5.811,5.097,27.834)
P: (10.532,9.627,27.097)
C4': (6.643,9.627,26.657)
C2': (6.526,8.507,28.764)
C2: (4.091,3.750,28.097)
N1: (4.844,2.641,28.094)
N3: (4.477,5.017,27.971)
N6: (6.916,1.640,27.955)
N7: (8.003,4.526,27.652)
N9: (6.556,6.238,27.684)
O5': (8.952,9.643,27.311)
O3': (4.925,10.248,28.263)
Image (generated by PyMOL):
PyMOL image
show in jmol