Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VTQ:A20:A45
Extra
PDB:
ATOM 1 O3' C A 19 -0.168 16.919 5.606 1.00 1.00 O
ATOM 2 P A A 20 1.176 16.035 5.412 1.00 1.00 P
ATOM 3 OP1 A A 20 0.869 14.715 4.769 1.00 1.00 O
ATOM 4 OP2 A A 20 1.647 15.865 6.817 1.00 1.00 O
ATOM 5 O5' A A 20 2.105 16.966 4.530 1.00 1.00 O
ATOM 6 C5' A A 20 3.088 17.857 5.113 1.00 1.00 C
ATOM 7 C4' A A 20 4.360 17.633 4.321 1.00 1.00 C
ATOM 8 O4' A A 20 5.247 16.796 5.023 1.00 1.00 O
ATOM 9 C3' A A 20 4.155 16.864 3.005 1.00 1.00 C
ATOM 10 O3' A A 20 3.619 17.694 1.988 1.00 1.00 O
ATOM 11 C2' A A 20 5.584 16.368 2.721 1.00 1.00 C
ATOM 12 O2' A A 20 6.320 17.469 2.213 1.00 1.00 O
ATOM 13 C1' A A 20 6.018 16.001 4.111 1.00 1.00 C
ATOM 14 N9 A A 20 5.765 14.593 4.455 1.00 1.00 N
ATOM 15 C8 A A 20 4.577 14.049 4.889 1.00 1.00 C
ATOM 16 N7 A A 20 4.632 12.764 5.128 1.00 1.00 N
ATOM 17 C5 A A 20 5.952 12.437 4.829 1.00 1.00 C
ATOM 18 C6 A A 20 6.645 11.207 4.889 1.00 1.00 C
ATOM 19 N6 A A 20 6.097 10.057 5.262 1.00 1.00 N
ATOM 20 N1 A A 20 7.954 11.261 4.530 1.00 1.00 N
ATOM 21 C2 A A 20 8.533 12.424 4.141 1.00 1.00 C
ATOM 22 N3 A A 20 7.948 13.621 4.051 1.00 1.00 N
ATOM 23 C4 A A 20 6.652 13.553 4.425 1.00 1.00 C
ATOM 24 P G A 21 3.637 17.442 0.404 1.00 1.00 P
ATOM 25 OP1 G A 21 2.382 17.979 -0.209 1.00 1.00 O
ATOM 26 OP2 G A 21 3.649 15.953 0.299 1.00 1.00 O
ATOM 27 O5' G A 21 4.933 18.176 -0.120 1.00 1.00 O
TER
ATOM 1 O3' G B 44 1.393 5.943 -0.194 1.00 1.00 O
ATOM 2 P A B 45 1.598 6.535 1.271 1.00 1.00 P
ATOM 3 OP1 A B 45 0.766 5.787 2.257 1.00 1.00 O
ATOM 4 OP2 A B 45 1.176 7.956 1.121 1.00 1.00 O
ATOM 5 O5' A B 45 3.154 6.365 1.495 1.00 1.00 O
ATOM 6 C5' A B 45 3.703 5.773 2.691 1.00 1.00 C
ATOM 7 C4' A B 45 5.204 5.855 2.527 1.00 1.00 C
ATOM 8 O4' A B 45 5.518 6.603 1.375 1.00 1.00 O
ATOM 9 C3' A B 45 5.922 6.616 3.633 1.00 1.00 C
ATOM 10 O3' A B 45 6.097 5.848 4.814 1.00 1.00 O
ATOM 11 C2' A B 45 7.248 6.963 2.930 1.00 1.00 C
ATOM 12 O2' A B 45 8.020 5.760 2.960 1.00 1.00 O
ATOM 13 C1' A B 45 6.748 7.296 1.555 1.00 1.00 C
ATOM 14 N9 A B 45 6.446 8.731 1.405 1.00 1.00 N
ATOM 15 C8 A B 45 5.234 9.316 1.704 1.00 1.00 C
ATOM 16 N7 A B 45 5.210 10.601 1.480 1.00 1.00 N
ATOM 17 C5 A B 45 6.483 10.887 1.017 1.00 1.00 C
ATOM 18 C6 A B 45 7.080 12.097 0.598 1.00 1.00 C
ATOM 19 N6 A B 45 6.446 13.260 0.598 1.00 1.00 N
ATOM 20 N1 A B 45 8.370 12.002 0.179 1.00 1.00 N
ATOM 21 C2 A B 45 9.027 10.805 0.179 1.00 1.00 C
ATOM 22 N3 A B 45 8.521 9.629 0.553 1.00 1.00 N
ATOM 23 C4 A B 45 7.248 9.738 0.957 1.00 1.00 C
ATOM 24 P U B 46 5.295 6.141 6.174 1.00 1.00 P
ATOM 25 OP1 U B 46 5.120 4.855 6.922 1.00 1.00 O
ATOM 26 OP2 U B 46 3.944 6.603 5.756 1.00 1.00 O
ATOM 27 O5' U B 46 6.229 7.201 6.892 1.00 1.00 O
TER
ATOM 2 P A A 20 1.176 16.035 5.412 1.00 1.00 P
ATOM 3 OP1 A A 20 0.869 14.715 4.769 1.00 1.00 O
ATOM 4 OP2 A A 20 1.647 15.865 6.817 1.00 1.00 O
ATOM 5 O5' A A 20 2.105 16.966 4.530 1.00 1.00 O
ATOM 6 C5' A A 20 3.088 17.857 5.113 1.00 1.00 C
ATOM 7 C4' A A 20 4.360 17.633 4.321 1.00 1.00 C
ATOM 8 O4' A A 20 5.247 16.796 5.023 1.00 1.00 O
ATOM 9 C3' A A 20 4.155 16.864 3.005 1.00 1.00 C
ATOM 10 O3' A A 20 3.619 17.694 1.988 1.00 1.00 O
ATOM 11 C2' A A 20 5.584 16.368 2.721 1.00 1.00 C
ATOM 12 O2' A A 20 6.320 17.469 2.213 1.00 1.00 O
ATOM 13 C1' A A 20 6.018 16.001 4.111 1.00 1.00 C
ATOM 14 N9 A A 20 5.765 14.593 4.455 1.00 1.00 N
ATOM 15 C8 A A 20 4.577 14.049 4.889 1.00 1.00 C
ATOM 16 N7 A A 20 4.632 12.764 5.128 1.00 1.00 N
ATOM 17 C5 A A 20 5.952 12.437 4.829 1.00 1.00 C
ATOM 18 C6 A A 20 6.645 11.207 4.889 1.00 1.00 C
ATOM 19 N6 A A 20 6.097 10.057 5.262 1.00 1.00 N
ATOM 20 N1 A A 20 7.954 11.261 4.530 1.00 1.00 N
ATOM 21 C2 A A 20 8.533 12.424 4.141 1.00 1.00 C
ATOM 22 N3 A A 20 7.948 13.621 4.051 1.00 1.00 N
ATOM 23 C4 A A 20 6.652 13.553 4.425 1.00 1.00 C
ATOM 24 P G A 21 3.637 17.442 0.404 1.00 1.00 P
ATOM 25 OP1 G A 21 2.382 17.979 -0.209 1.00 1.00 O
ATOM 26 OP2 G A 21 3.649 15.953 0.299 1.00 1.00 O
ATOM 27 O5' G A 21 4.933 18.176 -0.120 1.00 1.00 O
TER
ATOM 1 O3' G B 44 1.393 5.943 -0.194 1.00 1.00 O
ATOM 2 P A B 45 1.598 6.535 1.271 1.00 1.00 P
ATOM 3 OP1 A B 45 0.766 5.787 2.257 1.00 1.00 O
ATOM 4 OP2 A B 45 1.176 7.956 1.121 1.00 1.00 O
ATOM 5 O5' A B 45 3.154 6.365 1.495 1.00 1.00 O
ATOM 6 C5' A B 45 3.703 5.773 2.691 1.00 1.00 C
ATOM 7 C4' A B 45 5.204 5.855 2.527 1.00 1.00 C
ATOM 8 O4' A B 45 5.518 6.603 1.375 1.00 1.00 O
ATOM 9 C3' A B 45 5.922 6.616 3.633 1.00 1.00 C
ATOM 10 O3' A B 45 6.097 5.848 4.814 1.00 1.00 O
ATOM 11 C2' A B 45 7.248 6.963 2.930 1.00 1.00 C
ATOM 12 O2' A B 45 8.020 5.760 2.960 1.00 1.00 O
ATOM 13 C1' A B 45 6.748 7.296 1.555 1.00 1.00 C
ATOM 14 N9 A B 45 6.446 8.731 1.405 1.00 1.00 N
ATOM 15 C8 A B 45 5.234 9.316 1.704 1.00 1.00 C
ATOM 16 N7 A B 45 5.210 10.601 1.480 1.00 1.00 N
ATOM 17 C5 A B 45 6.483 10.887 1.017 1.00 1.00 C
ATOM 18 C6 A B 45 7.080 12.097 0.598 1.00 1.00 C
ATOM 19 N6 A B 45 6.446 13.260 0.598 1.00 1.00 N
ATOM 20 N1 A B 45 8.370 12.002 0.179 1.00 1.00 N
ATOM 21 C2 A B 45 9.027 10.805 0.179 1.00 1.00 C
ATOM 22 N3 A B 45 8.521 9.629 0.553 1.00 1.00 N
ATOM 23 C4 A B 45 7.248 9.738 0.957 1.00 1.00 C
ATOM 24 P U B 46 5.295 6.141 6.174 1.00 1.00 P
ATOM 25 OP1 U B 46 5.120 4.855 6.922 1.00 1.00 O
ATOM 26 OP2 U B 46 3.944 6.603 5.756 1.00 1.00 O
ATOM 27 O5' U B 46 6.229 7.201 6.892 1.00 1.00 O
TER
Atoms:
OP1: (0.869,14.715,4.769)
OP2: (1.647,15.865,6.817)
C3': (4.155,16.864,3.005)
C1': (6.018,16.001,4.111)
C5': (3.088,17.857,5.113)
O4': (5.247,16.796,5.023)
C8: (4.577,14.049,4.889)
O2': (6.320,17.469,2.213)
C6: (6.645,11.207,4.889)
C5: (5.952,12.437,4.829)
C4: (6.652,13.553,4.425)
P: (1.176,16.035,5.412)
C4': (4.360,17.633,4.321)
C2': (5.584,16.368,2.721)
C2: (8.533,12.424,4.141)
N1: (7.954,11.261,4.530)
N3: (7.948,13.621,4.051)
N6: (6.097,10.057,5.262)
N7: (4.632,12.764,5.128)
N9: (5.765,14.593,4.455)
O5': (2.105,16.966,4.530)
O3': (3.619,17.694,1.988)
OP2: (1.647,15.865,6.817)
C3': (4.155,16.864,3.005)
C1': (6.018,16.001,4.111)
C5': (3.088,17.857,5.113)
O4': (5.247,16.796,5.023)
C8: (4.577,14.049,4.889)
O2': (6.320,17.469,2.213)
C6: (6.645,11.207,4.889)
C5: (5.952,12.437,4.829)
C4: (6.652,13.553,4.425)
P: (1.176,16.035,5.412)
C4': (4.360,17.633,4.321)
C2': (5.584,16.368,2.721)
C2: (8.533,12.424,4.141)
N1: (7.954,11.261,4.530)
N3: (7.948,13.621,4.051)
N6: (6.097,10.057,5.262)
N7: (4.632,12.764,5.128)
N9: (5.765,14.593,4.455)
O5': (2.105,16.966,4.530)
O3': (3.619,17.694,1.988)
OP1: (0.766,5.787,2.257)
OP2: (1.176,7.956,1.121)
C3': (5.922,6.616,3.633)
C1': (6.748,7.296,1.555)
C5': (3.703,5.773,2.691)
O4': (5.518,6.603,1.375)
C8: (5.234,9.316,1.704)
O2': (8.020,5.760,2.960)
C6: (7.080,12.097,0.598)
C5: (6.483,10.887,1.017)
C4: (7.248,9.738,0.957)
P: (1.598,6.535,1.271)
C4': (5.204,5.855,2.527)
C2': (7.248,6.963,2.930)
C2: (9.027,10.805,0.179)
N1: (8.370,12.002,0.179)
N3: (8.521,9.629,0.553)
N6: (6.446,13.260,0.598)
N7: (5.210,10.601,1.480)
N9: (6.446,8.731,1.405)
O5': (3.154,6.365,1.495)
O3': (6.097,5.848,4.814)
OP2: (1.176,7.956,1.121)
C3': (5.922,6.616,3.633)
C1': (6.748,7.296,1.555)
C5': (3.703,5.773,2.691)
O4': (5.518,6.603,1.375)
C8: (5.234,9.316,1.704)
O2': (8.020,5.760,2.960)
C6: (7.080,12.097,0.598)
C5: (6.483,10.887,1.017)
C4: (7.248,9.738,0.957)
P: (1.598,6.535,1.271)
C4': (5.204,5.855,2.527)
C2': (7.248,6.963,2.930)
C2: (9.027,10.805,0.179)
N1: (8.370,12.002,0.179)
N3: (8.521,9.629,0.553)
N6: (6.446,13.260,0.598)
N7: (5.210,10.601,1.480)
N9: (6.446,8.731,1.405)
O5': (3.154,6.365,1.495)
O3': (6.097,5.848,4.814)
Image (generated by PyMOL):