Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0366:0398
Extra
PDB:
ATOM 1 O3' C A 365 91.932 101.442 5.437 1.00 60.54 O
ATOM 2 P A A 366 92.073 100.884 6.938 1.00 61.50 P
ATOM 3 OP1 A A 366 92.817 101.943 7.651 1.00 61.00 O
ATOM 4 OP2 A A 366 92.611 99.494 6.925 1.00 60.01 O
ATOM 5 O5' A A 366 90.572 100.834 7.477 1.00 57.45 O
ATOM 6 C5' A A 366 89.802 102.043 7.628 1.00 58.79 C
ATOM 7 C4' A A 366 88.377 101.720 8.014 1.00 58.83 C
ATOM 8 O4' A A 366 87.718 101.026 6.925 1.00 60.02 O
ATOM 9 C3' A A 366 88.206 100.802 9.215 1.00 58.61 C
ATOM 10 O3' A A 366 88.275 101.551 10.424 1.00 57.92 O
ATOM 11 C2' A A 366 86.824 100.207 8.978 1.00 58.17 C
ATOM 12 O2' A A 366 85.776 101.063 9.378 1.00 56.44 O
ATOM 13 C1' A A 366 86.811 100.071 7.451 1.00 59.85 C
ATOM 14 N9 A A 366 87.223 98.747 6.987 1.00 60.89 N
ATOM 15 C8 A A 366 88.493 98.313 6.686 1.00 60.31 C
ATOM 16 N7 A A 366 88.547 97.059 6.316 1.00 59.51 N
ATOM 17 C5 A A 366 87.226 96.639 6.372 1.00 61.48 C
ATOM 18 C6 A A 366 86.621 95.406 6.105 1.00 62.53 C
ATOM 19 N6 A A 366 87.300 94.325 5.713 1.00 63.97 N
ATOM 20 N1 A A 366 85.281 95.316 6.259 1.00 61.65 N
ATOM 21 C2 A A 366 84.609 96.402 6.656 1.00 60.46 C
ATOM 22 N3 A A 366 85.066 97.616 6.939 1.00 60.92 N
ATOM 23 C4 A A 366 86.399 97.669 6.776 1.00 60.90 C
ATOM 24 P G A 367 88.610 100.813 11.815 1.00 57.53 P
ATOM 25 OP1 G A 367 89.857 100.020 11.649 1.00 53.21 O
ATOM 26 OP2 G A 367 87.365 100.146 12.290 1.00 55.44 O
ATOM 27 O5' G A 367 88.932 102.027 12.797 1.00 56.03 O
TER
ATOM 1 O3' U B 397 92.372 92.321 8.700 1.00 67.19 O
ATOM 2 P A B 398 92.296 91.855 7.164 1.00 67.87 P
ATOM 3 OP1 A B 398 93.389 90.881 6.899 1.00 67.55 O
ATOM 4 OP2 A B 398 92.173 93.064 6.307 1.00 67.41 O
ATOM 5 O5' A B 398 90.900 91.092 7.099 1.00 69.51 O
ATOM 6 C5' A B 398 90.688 89.876 7.836 1.00 71.46 C
ATOM 7 C4' A B 398 89.210 89.571 7.931 1.00 73.64 C
ATOM 8 O4' A B 398 88.576 90.481 8.876 1.00 74.28 O
ATOM 9 C3' A B 398 88.421 89.689 6.629 1.00 74.25 C
ATOM 10 O3' A B 398 87.399 88.698 6.590 1.00 76.36 O
ATOM 11 C2' A B 398 87.779 91.066 6.766 1.00 74.75 C
ATOM 12 O2' A B 398 86.599 91.242 6.007 1.00 74.43 O
ATOM 13 C1' A B 398 87.461 91.082 8.257 1.00 75.69 C
ATOM 14 N9 A B 398 87.251 92.420 8.809 1.00 76.92 N
ATOM 15 C8 A B 398 88.166 93.404 9.097 1.00 77.00 C
ATOM 16 N7 A B 398 87.625 94.512 9.548 1.00 77.34 N
ATOM 17 C5 A B 398 86.263 94.235 9.565 1.00 77.81 C
ATOM 18 C6 A B 398 85.141 95.005 9.936 1.00 78.99 C
ATOM 19 N6 A B 398 85.217 96.268 10.368 1.00 78.72 N
ATOM 20 N1 A B 398 83.922 94.424 9.842 1.00 79.62 N
ATOM 21 C2 A B 398 83.846 93.159 9.400 1.00 79.22 C
ATOM 22 N3 A B 398 84.824 92.340 9.018 1.00 77.95 N
ATOM 23 C4 A B 398 86.021 92.947 9.125 1.00 77.49 C
ATOM 24 P A B 399 87.468 87.520 5.495 1.00 78.05 P
ATOM 25 OP1 A B 399 87.943 88.090 4.201 1.00 77.24 O
ATOM 26 OP2 A B 399 86.170 86.790 5.541 1.00 77.09 O
ATOM 27 O5' A B 399 88.616 86.568 6.052 1.00 76.50 O
TER
ATOM 2 P A A 366 92.073 100.884 6.938 1.00 61.50 P
ATOM 3 OP1 A A 366 92.817 101.943 7.651 1.00 61.00 O
ATOM 4 OP2 A A 366 92.611 99.494 6.925 1.00 60.01 O
ATOM 5 O5' A A 366 90.572 100.834 7.477 1.00 57.45 O
ATOM 6 C5' A A 366 89.802 102.043 7.628 1.00 58.79 C
ATOM 7 C4' A A 366 88.377 101.720 8.014 1.00 58.83 C
ATOM 8 O4' A A 366 87.718 101.026 6.925 1.00 60.02 O
ATOM 9 C3' A A 366 88.206 100.802 9.215 1.00 58.61 C
ATOM 10 O3' A A 366 88.275 101.551 10.424 1.00 57.92 O
ATOM 11 C2' A A 366 86.824 100.207 8.978 1.00 58.17 C
ATOM 12 O2' A A 366 85.776 101.063 9.378 1.00 56.44 O
ATOM 13 C1' A A 366 86.811 100.071 7.451 1.00 59.85 C
ATOM 14 N9 A A 366 87.223 98.747 6.987 1.00 60.89 N
ATOM 15 C8 A A 366 88.493 98.313 6.686 1.00 60.31 C
ATOM 16 N7 A A 366 88.547 97.059 6.316 1.00 59.51 N
ATOM 17 C5 A A 366 87.226 96.639 6.372 1.00 61.48 C
ATOM 18 C6 A A 366 86.621 95.406 6.105 1.00 62.53 C
ATOM 19 N6 A A 366 87.300 94.325 5.713 1.00 63.97 N
ATOM 20 N1 A A 366 85.281 95.316 6.259 1.00 61.65 N
ATOM 21 C2 A A 366 84.609 96.402 6.656 1.00 60.46 C
ATOM 22 N3 A A 366 85.066 97.616 6.939 1.00 60.92 N
ATOM 23 C4 A A 366 86.399 97.669 6.776 1.00 60.90 C
ATOM 24 P G A 367 88.610 100.813 11.815 1.00 57.53 P
ATOM 25 OP1 G A 367 89.857 100.020 11.649 1.00 53.21 O
ATOM 26 OP2 G A 367 87.365 100.146 12.290 1.00 55.44 O
ATOM 27 O5' G A 367 88.932 102.027 12.797 1.00 56.03 O
TER
ATOM 1 O3' U B 397 92.372 92.321 8.700 1.00 67.19 O
ATOM 2 P A B 398 92.296 91.855 7.164 1.00 67.87 P
ATOM 3 OP1 A B 398 93.389 90.881 6.899 1.00 67.55 O
ATOM 4 OP2 A B 398 92.173 93.064 6.307 1.00 67.41 O
ATOM 5 O5' A B 398 90.900 91.092 7.099 1.00 69.51 O
ATOM 6 C5' A B 398 90.688 89.876 7.836 1.00 71.46 C
ATOM 7 C4' A B 398 89.210 89.571 7.931 1.00 73.64 C
ATOM 8 O4' A B 398 88.576 90.481 8.876 1.00 74.28 O
ATOM 9 C3' A B 398 88.421 89.689 6.629 1.00 74.25 C
ATOM 10 O3' A B 398 87.399 88.698 6.590 1.00 76.36 O
ATOM 11 C2' A B 398 87.779 91.066 6.766 1.00 74.75 C
ATOM 12 O2' A B 398 86.599 91.242 6.007 1.00 74.43 O
ATOM 13 C1' A B 398 87.461 91.082 8.257 1.00 75.69 C
ATOM 14 N9 A B 398 87.251 92.420 8.809 1.00 76.92 N
ATOM 15 C8 A B 398 88.166 93.404 9.097 1.00 77.00 C
ATOM 16 N7 A B 398 87.625 94.512 9.548 1.00 77.34 N
ATOM 17 C5 A B 398 86.263 94.235 9.565 1.00 77.81 C
ATOM 18 C6 A B 398 85.141 95.005 9.936 1.00 78.99 C
ATOM 19 N6 A B 398 85.217 96.268 10.368 1.00 78.72 N
ATOM 20 N1 A B 398 83.922 94.424 9.842 1.00 79.62 N
ATOM 21 C2 A B 398 83.846 93.159 9.400 1.00 79.22 C
ATOM 22 N3 A B 398 84.824 92.340 9.018 1.00 77.95 N
ATOM 23 C4 A B 398 86.021 92.947 9.125 1.00 77.49 C
ATOM 24 P A B 399 87.468 87.520 5.495 1.00 78.05 P
ATOM 25 OP1 A B 399 87.943 88.090 4.201 1.00 77.24 O
ATOM 26 OP2 A B 399 86.170 86.790 5.541 1.00 77.09 O
ATOM 27 O5' A B 399 88.616 86.568 6.052 1.00 76.50 O
TER
Atoms:
OP1: (92.817,101.943,7.651)
OP2: (92.611,99.494,6.925)
C3': (88.206,100.802,9.215)
C1': (86.811,100.071,7.451)
C5': (89.802,102.043,7.628)
O4': (87.718,101.026,6.925)
C8: (88.493,98.313,6.686)
O2': (85.776,101.063,9.378)
C6: (86.621,95.406,6.105)
C5: (87.226,96.639,6.372)
C4: (86.399,97.669,6.776)
P: (92.073,100.884,6.938)
C4': (88.377,101.720,8.014)
C2': (86.824,100.207,8.978)
C2: (84.609,96.402,6.656)
N1: (85.281,95.316,6.259)
N3: (85.066,97.616,6.939)
N6: (87.300,94.325,5.713)
N7: (88.547,97.059,6.316)
N9: (87.223,98.747,6.987)
O5': (90.572,100.834,7.477)
O3': (88.275,101.551,10.424)
OP2: (92.611,99.494,6.925)
C3': (88.206,100.802,9.215)
C1': (86.811,100.071,7.451)
C5': (89.802,102.043,7.628)
O4': (87.718,101.026,6.925)
C8: (88.493,98.313,6.686)
O2': (85.776,101.063,9.378)
C6: (86.621,95.406,6.105)
C5: (87.226,96.639,6.372)
C4: (86.399,97.669,6.776)
P: (92.073,100.884,6.938)
C4': (88.377,101.720,8.014)
C2': (86.824,100.207,8.978)
C2: (84.609,96.402,6.656)
N1: (85.281,95.316,6.259)
N3: (85.066,97.616,6.939)
N6: (87.300,94.325,5.713)
N7: (88.547,97.059,6.316)
N9: (87.223,98.747,6.987)
O5': (90.572,100.834,7.477)
O3': (88.275,101.551,10.424)
OP1: (93.389,90.881,6.899)
OP2: (92.173,93.064,6.307)
C3': (88.421,89.689,6.629)
C1': (87.461,91.082,8.257)
C5': (90.688,89.876,7.836)
O4': (88.576,90.481,8.876)
C8: (88.166,93.404,9.097)
O2': (86.599,91.242,6.007)
C6: (85.141,95.005,9.936)
C5: (86.263,94.235,9.565)
C4: (86.021,92.947,9.125)
P: (92.296,91.855,7.164)
C4': (89.210,89.571,7.931)
C2': (87.779,91.066,6.766)
C2: (83.846,93.159,9.400)
N1: (83.922,94.424,9.842)
N3: (84.824,92.340,9.018)
N6: (85.217,96.268,10.368)
N7: (87.625,94.512,9.548)
N9: (87.251,92.420,8.809)
O5': (90.900,91.092,7.099)
O3': (87.399,88.698,6.590)
OP2: (92.173,93.064,6.307)
C3': (88.421,89.689,6.629)
C1': (87.461,91.082,8.257)
C5': (90.688,89.876,7.836)
O4': (88.576,90.481,8.876)
C8: (88.166,93.404,9.097)
O2': (86.599,91.242,6.007)
C6: (85.141,95.005,9.936)
C5: (86.263,94.235,9.565)
C4: (86.021,92.947,9.125)
P: (92.296,91.855,7.164)
C4': (89.210,89.571,7.931)
C2': (87.779,91.066,6.766)
C2: (83.846,93.159,9.400)
N1: (83.922,94.424,9.842)
N3: (84.824,92.340,9.018)
N6: (85.217,96.268,10.368)
N7: (87.625,94.512,9.548)
N9: (87.251,92.420,8.809)
O5': (90.900,91.092,7.099)
O3': (87.399,88.698,6.590)
Image (generated by PyMOL):