Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01190:02394
Extra
PDB:
ATOM 1 O3' A A1189 52.122 108.309 135.598 1.00 42.63 O
ATOM 2 P A A1190 52.518 109.829 135.965 1.00 44.79 P
ATOM 3 OP1 A A1190 52.904 109.933 137.390 1.00 44.68 O
ATOM 4 OP2 A A1190 51.421 110.674 135.454 1.00 46.17 O
ATOM 5 O5' A A1190 53.821 110.120 135.092 1.00 44.54 O
ATOM 6 C5' A A1190 53.734 110.353 133.666 1.00 43.42 C
ATOM 7 C4' A A1190 54.757 111.383 133.248 1.00 43.09 C
ATOM 8 O4' A A1190 56.083 110.808 133.328 1.00 42.26 O
ATOM 9 C3' A A1190 54.714 111.850 131.804 1.00 42.66 C
ATOM 10 O3' A A1190 53.654 112.795 131.622 1.00 43.32 O
ATOM 11 C2' A A1190 56.095 112.494 131.659 1.00 41.90 C
ATOM 12 O2' A A1190 56.180 113.762 132.266 1.00 40.40 O
ATOM 13 C1' A A1190 56.957 111.564 132.511 1.00 42.90 C
ATOM 14 N9 A A1190 57.827 110.646 131.775 1.00 45.51 N
ATOM 15 C8 A A1190 57.548 109.891 130.661 1.00 45.77 C
ATOM 16 N7 A A1190 58.548 109.139 130.269 1.00 45.15 N
ATOM 17 C5 A A1190 59.555 109.421 131.182 1.00 46.60 C
ATOM 18 C6 A A1190 60.867 108.935 131.329 1.00 45.77 C
ATOM 19 N6 A A1190 61.419 108.021 130.529 1.00 43.78 N
ATOM 20 N1 A A1190 61.604 109.425 132.347 1.00 45.34 N
ATOM 21 C2 A A1190 61.056 110.332 133.155 1.00 44.92 C
ATOM 22 N3 A A1190 59.839 110.862 133.126 1.00 45.16 N
ATOM 23 C4 A A1190 59.128 110.358 132.105 1.00 46.09 C
ATOM 24 P A A1191 52.894 112.906 130.204 1.00 43.40 P
ATOM 25 OP1 A A1191 51.635 113.669 130.441 1.00 41.41 O
ATOM 26 OP2 A A1191 52.829 111.572 129.571 1.00 43.59 O
ATOM 27 O5' A A1191 53.844 113.838 129.334 1.00 41.82 O
TER
ATOM 1 O3' C B2393 58.377 115.941 134.679 1.00 42.93 O
ATOM 2 P A B2394 57.766 114.871 135.691 1.00 45.20 P
ATOM 3 OP1 A B2394 56.860 113.994 134.904 1.00 44.71 O
ATOM 4 OP2 A B2394 57.235 115.588 136.870 1.00 44.77 O
ATOM 5 O5' A B2394 59.057 114.045 136.122 1.00 45.20 O
ATOM 6 C5' A B2394 59.863 113.387 135.131 1.00 44.10 C
ATOM 7 C4' A B2394 61.331 113.663 135.362 1.00 44.70 C
ATOM 8 O4' A B2394 62.106 112.901 134.404 1.00 46.53 O
ATOM 9 C3' A B2394 61.783 115.102 135.172 1.00 45.09 C
ATOM 10 O3' A B2394 63.007 115.278 135.869 1.00 43.65 O
ATOM 11 C2' A B2394 62.072 115.146 133.679 1.00 46.54 C
ATOM 12 O2' A B2394 62.971 116.183 133.340 1.00 48.22 O
ATOM 13 C1' A B2394 62.711 113.774 133.469 1.00 47.78 C
ATOM 14 N9 A B2394 62.545 113.181 132.141 1.00 49.73 N
ATOM 15 C8 A B2394 63.470 112.431 131.458 1.00 51.34 C
ATOM 16 N7 A B2394 63.033 111.970 130.314 1.00 52.31 N
ATOM 17 C5 A B2394 61.738 112.458 130.231 1.00 51.32 C
ATOM 18 C6 A B2394 60.742 112.318 129.261 1.00 51.63 C
ATOM 19 N6 A B2394 60.897 111.614 128.139 1.00 51.72 N
ATOM 20 N1 A B2394 59.564 112.934 129.480 1.00 52.78 N
ATOM 21 C2 A B2394 59.411 113.643 130.600 1.00 52.51 C
ATOM 22 N3 A B2394 60.272 113.849 131.586 1.00 52.35 N
ATOM 23 C4 A B2394 61.430 113.220 131.339 1.00 50.66 C
ATOM 24 P U B2395 63.017 115.934 137.330 1.00 46.47 P
ATOM 25 OP1 U B2395 64.314 115.566 137.931 1.00 46.20 O
ATOM 26 OP2 U B2395 61.766 115.570 138.028 1.00 47.73 O
ATOM 27 O5' U B2395 63.019 117.498 137.042 1.00 44.57 O
TER
ATOM 2 P A A1190 52.518 109.829 135.965 1.00 44.79 P
ATOM 3 OP1 A A1190 52.904 109.933 137.390 1.00 44.68 O
ATOM 4 OP2 A A1190 51.421 110.674 135.454 1.00 46.17 O
ATOM 5 O5' A A1190 53.821 110.120 135.092 1.00 44.54 O
ATOM 6 C5' A A1190 53.734 110.353 133.666 1.00 43.42 C
ATOM 7 C4' A A1190 54.757 111.383 133.248 1.00 43.09 C
ATOM 8 O4' A A1190 56.083 110.808 133.328 1.00 42.26 O
ATOM 9 C3' A A1190 54.714 111.850 131.804 1.00 42.66 C
ATOM 10 O3' A A1190 53.654 112.795 131.622 1.00 43.32 O
ATOM 11 C2' A A1190 56.095 112.494 131.659 1.00 41.90 C
ATOM 12 O2' A A1190 56.180 113.762 132.266 1.00 40.40 O
ATOM 13 C1' A A1190 56.957 111.564 132.511 1.00 42.90 C
ATOM 14 N9 A A1190 57.827 110.646 131.775 1.00 45.51 N
ATOM 15 C8 A A1190 57.548 109.891 130.661 1.00 45.77 C
ATOM 16 N7 A A1190 58.548 109.139 130.269 1.00 45.15 N
ATOM 17 C5 A A1190 59.555 109.421 131.182 1.00 46.60 C
ATOM 18 C6 A A1190 60.867 108.935 131.329 1.00 45.77 C
ATOM 19 N6 A A1190 61.419 108.021 130.529 1.00 43.78 N
ATOM 20 N1 A A1190 61.604 109.425 132.347 1.00 45.34 N
ATOM 21 C2 A A1190 61.056 110.332 133.155 1.00 44.92 C
ATOM 22 N3 A A1190 59.839 110.862 133.126 1.00 45.16 N
ATOM 23 C4 A A1190 59.128 110.358 132.105 1.00 46.09 C
ATOM 24 P A A1191 52.894 112.906 130.204 1.00 43.40 P
ATOM 25 OP1 A A1191 51.635 113.669 130.441 1.00 41.41 O
ATOM 26 OP2 A A1191 52.829 111.572 129.571 1.00 43.59 O
ATOM 27 O5' A A1191 53.844 113.838 129.334 1.00 41.82 O
TER
ATOM 1 O3' C B2393 58.377 115.941 134.679 1.00 42.93 O
ATOM 2 P A B2394 57.766 114.871 135.691 1.00 45.20 P
ATOM 3 OP1 A B2394 56.860 113.994 134.904 1.00 44.71 O
ATOM 4 OP2 A B2394 57.235 115.588 136.870 1.00 44.77 O
ATOM 5 O5' A B2394 59.057 114.045 136.122 1.00 45.20 O
ATOM 6 C5' A B2394 59.863 113.387 135.131 1.00 44.10 C
ATOM 7 C4' A B2394 61.331 113.663 135.362 1.00 44.70 C
ATOM 8 O4' A B2394 62.106 112.901 134.404 1.00 46.53 O
ATOM 9 C3' A B2394 61.783 115.102 135.172 1.00 45.09 C
ATOM 10 O3' A B2394 63.007 115.278 135.869 1.00 43.65 O
ATOM 11 C2' A B2394 62.072 115.146 133.679 1.00 46.54 C
ATOM 12 O2' A B2394 62.971 116.183 133.340 1.00 48.22 O
ATOM 13 C1' A B2394 62.711 113.774 133.469 1.00 47.78 C
ATOM 14 N9 A B2394 62.545 113.181 132.141 1.00 49.73 N
ATOM 15 C8 A B2394 63.470 112.431 131.458 1.00 51.34 C
ATOM 16 N7 A B2394 63.033 111.970 130.314 1.00 52.31 N
ATOM 17 C5 A B2394 61.738 112.458 130.231 1.00 51.32 C
ATOM 18 C6 A B2394 60.742 112.318 129.261 1.00 51.63 C
ATOM 19 N6 A B2394 60.897 111.614 128.139 1.00 51.72 N
ATOM 20 N1 A B2394 59.564 112.934 129.480 1.00 52.78 N
ATOM 21 C2 A B2394 59.411 113.643 130.600 1.00 52.51 C
ATOM 22 N3 A B2394 60.272 113.849 131.586 1.00 52.35 N
ATOM 23 C4 A B2394 61.430 113.220 131.339 1.00 50.66 C
ATOM 24 P U B2395 63.017 115.934 137.330 1.00 46.47 P
ATOM 25 OP1 U B2395 64.314 115.566 137.931 1.00 46.20 O
ATOM 26 OP2 U B2395 61.766 115.570 138.028 1.00 47.73 O
ATOM 27 O5' U B2395 63.019 117.498 137.042 1.00 44.57 O
TER
Atoms:
OP1: (52.904,109.933,137.390)
OP2: (51.421,110.674,135.454)
C3': (54.714,111.850,131.804)
C1': (56.957,111.564,132.511)
C5': (53.734,110.353,133.666)
O4': (56.083,110.808,133.328)
C8: (57.548,109.891,130.661)
O2': (56.180,113.762,132.266)
C6: (60.867,108.935,131.329)
C5: (59.555,109.421,131.182)
C4: (59.128,110.358,132.105)
P: (52.518,109.829,135.965)
C4': (54.757,111.383,133.248)
C2': (56.095,112.494,131.659)
C2: (61.056,110.332,133.155)
N1: (61.604,109.425,132.347)
N3: (59.839,110.862,133.126)
N6: (61.419,108.021,130.529)
N7: (58.548,109.139,130.269)
N9: (57.827,110.646,131.775)
O5': (53.821,110.120,135.092)
O3': (53.654,112.795,131.622)
OP2: (51.421,110.674,135.454)
C3': (54.714,111.850,131.804)
C1': (56.957,111.564,132.511)
C5': (53.734,110.353,133.666)
O4': (56.083,110.808,133.328)
C8: (57.548,109.891,130.661)
O2': (56.180,113.762,132.266)
C6: (60.867,108.935,131.329)
C5: (59.555,109.421,131.182)
C4: (59.128,110.358,132.105)
P: (52.518,109.829,135.965)
C4': (54.757,111.383,133.248)
C2': (56.095,112.494,131.659)
C2: (61.056,110.332,133.155)
N1: (61.604,109.425,132.347)
N3: (59.839,110.862,133.126)
N6: (61.419,108.021,130.529)
N7: (58.548,109.139,130.269)
N9: (57.827,110.646,131.775)
O5': (53.821,110.120,135.092)
O3': (53.654,112.795,131.622)
OP1: (56.860,113.994,134.904)
OP2: (57.235,115.588,136.870)
C3': (61.783,115.102,135.172)
C1': (62.711,113.774,133.469)
C5': (59.863,113.387,135.131)
O4': (62.106,112.901,134.404)
C8: (63.470,112.431,131.458)
O2': (62.971,116.183,133.340)
C6: (60.742,112.318,129.261)
C5: (61.738,112.458,130.231)
C4: (61.430,113.220,131.339)
P: (57.766,114.871,135.691)
C4': (61.331,113.663,135.362)
C2': (62.072,115.146,133.679)
C2: (59.411,113.643,130.600)
N1: (59.564,112.934,129.480)
N3: (60.272,113.849,131.586)
N6: (60.897,111.614,128.139)
N7: (63.033,111.970,130.314)
N9: (62.545,113.181,132.141)
O5': (59.057,114.045,136.122)
O3': (63.007,115.278,135.869)
OP2: (57.235,115.588,136.870)
C3': (61.783,115.102,135.172)
C1': (62.711,113.774,133.469)
C5': (59.863,113.387,135.131)
O4': (62.106,112.901,134.404)
C8: (63.470,112.431,131.458)
O2': (62.971,116.183,133.340)
C6: (60.742,112.318,129.261)
C5: (61.738,112.458,130.231)
C4: (61.430,113.220,131.339)
P: (57.766,114.871,135.691)
C4': (61.331,113.663,135.362)
C2': (62.072,115.146,133.679)
C2: (59.411,113.643,130.600)
N1: (59.564,112.934,129.480)
N3: (60.272,113.849,131.586)
N6: (60.897,111.614,128.139)
N7: (63.033,111.970,130.314)
N9: (62.545,113.181,132.141)
O5': (59.057,114.045,136.122)
O3': (63.007,115.278,135.869)
Image (generated by PyMOL):