Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0235:0250
Extra
PDB:
ATOM 1 O3' G A 234 93.503 117.210 -8.114 1.00 62.32 O
ATOM 2 P A A 235 94.001 118.197 -9.277 1.00 62.30 P
ATOM 3 OP1 A A 235 93.531 117.635 -10.570 1.00 63.17 O
ATOM 4 OP2 A A 235 95.451 118.427 -9.063 1.00 61.35 O
ATOM 5 O5' A A 235 93.198 119.542 -9.003 1.00 61.41 O
ATOM 6 C5' A A 235 91.794 119.655 -9.337 1.00 59.44 C
ATOM 7 C4' A A 235 91.184 120.825 -8.598 1.00 60.03 C
ATOM 8 O4' A A 235 91.052 120.490 -7.182 1.00 58.53 O
ATOM 9 C3' A A 235 92.030 122.097 -8.650 1.00 58.87 C
ATOM 10 O3' A A 235 91.188 123.245 -8.574 1.00 60.16 O
ATOM 11 C2' A A 235 92.848 121.973 -7.368 1.00 57.76 C
ATOM 12 O2' A A 235 93.400 123.176 -6.882 1.00 58.01 O
ATOM 13 C1' A A 235 91.792 121.419 -6.415 1.00 57.76 C
ATOM 14 N9 A A 235 92.346 120.748 -5.241 1.00 55.74 N
ATOM 15 C8 A A 235 93.016 119.553 -5.175 1.00 55.50 C
ATOM 16 N7 A A 235 93.438 119.250 -3.974 1.00 54.67 N
ATOM 17 C5 A A 235 93.005 120.313 -3.192 1.00 54.20 C
ATOM 18 C6 A A 235 93.145 120.598 -1.824 1.00 52.19 C
ATOM 19 N6 A A 235 93.805 119.814 -0.972 1.00 51.81 N
ATOM 20 N1 A A 235 92.585 121.735 -1.359 1.00 50.77 N
ATOM 21 C2 A A 235 91.942 122.529 -2.218 1.00 52.00 C
ATOM 22 N3 A A 235 91.754 122.377 -3.526 1.00 53.86 N
ATOM 23 C4 A A 235 92.318 121.234 -3.956 1.00 54.10 C
ATOM 24 P A A 236 90.635 123.924 -9.921 1.00 60.82 P
ATOM 25 OP1 A A 236 91.693 123.799 -10.957 1.00 62.35 O
ATOM 26 OP2 A A 236 90.105 125.266 -9.566 1.00 61.21 O
ATOM 27 O5' A A 236 89.400 123.008 -10.345 1.00 59.87 O
TER
ATOM 1 O3' A B 249 94.886 122.603 3.368 1.00 45.31 O
ATOM 2 P A B 250 96.455 122.601 3.726 1.00 48.99 P
ATOM 3 OP1 A B 250 96.615 122.503 5.192 1.00 52.85 O
ATOM 4 OP2 A B 250 97.110 123.723 3.000 1.00 51.99 O
ATOM 5 O5' A B 250 96.999 121.239 3.110 1.00 49.44 O
ATOM 6 C5' A B 250 96.658 120.845 1.769 1.00 47.71 C
ATOM 7 C4' A B 250 97.402 119.587 1.391 1.00 47.80 C
ATOM 8 O4' A B 250 96.960 119.154 0.076 1.00 50.01 O
ATOM 9 C3' A B 250 98.915 119.728 1.293 1.00 46.87 C
ATOM 10 O3' A B 250 99.503 118.459 1.571 1.00 44.42 O
ATOM 11 C2' A B 250 99.106 120.083 -0.182 1.00 49.51 C
ATOM 12 O2' A B 250 100.397 119.774 -0.671 1.00 50.68 O
ATOM 13 C1' A B 250 98.049 119.189 -0.829 1.00 50.53 C
ATOM 14 N9 A B 250 97.545 119.630 -2.132 1.00 51.08 N
ATOM 15 C8 A B 250 97.675 118.968 -3.326 1.00 50.38 C
ATOM 16 N7 A B 250 97.089 119.571 -4.332 1.00 51.05 N
ATOM 17 C5 A B 250 96.541 120.712 -3.765 1.00 50.83 C
ATOM 18 C6 A B 250 95.784 121.768 -4.306 1.00 50.84 C
ATOM 19 N6 A B 250 95.423 121.843 -5.589 1.00 50.35 N
ATOM 20 N1 A B 250 95.399 122.756 -3.470 1.00 51.50 N
ATOM 21 C2 A B 250 95.749 122.676 -2.182 1.00 50.64 C
ATOM 22 N3 A B 250 96.450 121.732 -1.555 1.00 51.31 N
ATOM 23 C4 A B 250 96.822 120.768 -2.412 1.00 51.00 C
ATOM 24 P U B 251 100.609 118.319 2.728 1.00 45.13 P
ATOM 25 OP1 U B 251 101.396 119.578 2.824 1.00 44.70 O
ATOM 26 OP2 U B 251 101.320 117.021 2.543 1.00 43.03 O
ATOM 27 O5' U B 251 99.735 118.216 4.056 1.00 47.24 O
TER
ATOM 2 P A A 235 94.001 118.197 -9.277 1.00 62.30 P
ATOM 3 OP1 A A 235 93.531 117.635 -10.570 1.00 63.17 O
ATOM 4 OP2 A A 235 95.451 118.427 -9.063 1.00 61.35 O
ATOM 5 O5' A A 235 93.198 119.542 -9.003 1.00 61.41 O
ATOM 6 C5' A A 235 91.794 119.655 -9.337 1.00 59.44 C
ATOM 7 C4' A A 235 91.184 120.825 -8.598 1.00 60.03 C
ATOM 8 O4' A A 235 91.052 120.490 -7.182 1.00 58.53 O
ATOM 9 C3' A A 235 92.030 122.097 -8.650 1.00 58.87 C
ATOM 10 O3' A A 235 91.188 123.245 -8.574 1.00 60.16 O
ATOM 11 C2' A A 235 92.848 121.973 -7.368 1.00 57.76 C
ATOM 12 O2' A A 235 93.400 123.176 -6.882 1.00 58.01 O
ATOM 13 C1' A A 235 91.792 121.419 -6.415 1.00 57.76 C
ATOM 14 N9 A A 235 92.346 120.748 -5.241 1.00 55.74 N
ATOM 15 C8 A A 235 93.016 119.553 -5.175 1.00 55.50 C
ATOM 16 N7 A A 235 93.438 119.250 -3.974 1.00 54.67 N
ATOM 17 C5 A A 235 93.005 120.313 -3.192 1.00 54.20 C
ATOM 18 C6 A A 235 93.145 120.598 -1.824 1.00 52.19 C
ATOM 19 N6 A A 235 93.805 119.814 -0.972 1.00 51.81 N
ATOM 20 N1 A A 235 92.585 121.735 -1.359 1.00 50.77 N
ATOM 21 C2 A A 235 91.942 122.529 -2.218 1.00 52.00 C
ATOM 22 N3 A A 235 91.754 122.377 -3.526 1.00 53.86 N
ATOM 23 C4 A A 235 92.318 121.234 -3.956 1.00 54.10 C
ATOM 24 P A A 236 90.635 123.924 -9.921 1.00 60.82 P
ATOM 25 OP1 A A 236 91.693 123.799 -10.957 1.00 62.35 O
ATOM 26 OP2 A A 236 90.105 125.266 -9.566 1.00 61.21 O
ATOM 27 O5' A A 236 89.400 123.008 -10.345 1.00 59.87 O
TER
ATOM 1 O3' A B 249 94.886 122.603 3.368 1.00 45.31 O
ATOM 2 P A B 250 96.455 122.601 3.726 1.00 48.99 P
ATOM 3 OP1 A B 250 96.615 122.503 5.192 1.00 52.85 O
ATOM 4 OP2 A B 250 97.110 123.723 3.000 1.00 51.99 O
ATOM 5 O5' A B 250 96.999 121.239 3.110 1.00 49.44 O
ATOM 6 C5' A B 250 96.658 120.845 1.769 1.00 47.71 C
ATOM 7 C4' A B 250 97.402 119.587 1.391 1.00 47.80 C
ATOM 8 O4' A B 250 96.960 119.154 0.076 1.00 50.01 O
ATOM 9 C3' A B 250 98.915 119.728 1.293 1.00 46.87 C
ATOM 10 O3' A B 250 99.503 118.459 1.571 1.00 44.42 O
ATOM 11 C2' A B 250 99.106 120.083 -0.182 1.00 49.51 C
ATOM 12 O2' A B 250 100.397 119.774 -0.671 1.00 50.68 O
ATOM 13 C1' A B 250 98.049 119.189 -0.829 1.00 50.53 C
ATOM 14 N9 A B 250 97.545 119.630 -2.132 1.00 51.08 N
ATOM 15 C8 A B 250 97.675 118.968 -3.326 1.00 50.38 C
ATOM 16 N7 A B 250 97.089 119.571 -4.332 1.00 51.05 N
ATOM 17 C5 A B 250 96.541 120.712 -3.765 1.00 50.83 C
ATOM 18 C6 A B 250 95.784 121.768 -4.306 1.00 50.84 C
ATOM 19 N6 A B 250 95.423 121.843 -5.589 1.00 50.35 N
ATOM 20 N1 A B 250 95.399 122.756 -3.470 1.00 51.50 N
ATOM 21 C2 A B 250 95.749 122.676 -2.182 1.00 50.64 C
ATOM 22 N3 A B 250 96.450 121.732 -1.555 1.00 51.31 N
ATOM 23 C4 A B 250 96.822 120.768 -2.412 1.00 51.00 C
ATOM 24 P U B 251 100.609 118.319 2.728 1.00 45.13 P
ATOM 25 OP1 U B 251 101.396 119.578 2.824 1.00 44.70 O
ATOM 26 OP2 U B 251 101.320 117.021 2.543 1.00 43.03 O
ATOM 27 O5' U B 251 99.735 118.216 4.056 1.00 47.24 O
TER
Atoms:
OP1: (93.531,117.635,-10.570)
OP2: (95.451,118.427,-9.063)
C3': (92.030,122.097,-8.650)
C1': (91.792,121.419,-6.415)
C5': (91.794,119.655,-9.337)
O4': (91.052,120.490,-7.182)
C8: (93.016,119.553,-5.175)
O2': (93.400,123.176,-6.882)
C6: (93.145,120.598,-1.824)
C5: (93.005,120.313,-3.192)
C4: (92.318,121.234,-3.956)
P: (94.001,118.197,-9.277)
C4': (91.184,120.825,-8.598)
C2': (92.848,121.973,-7.368)
C2: (91.942,122.529,-2.218)
N1: (92.585,121.735,-1.359)
N3: (91.754,122.377,-3.526)
N6: (93.805,119.814,-0.972)
N7: (93.438,119.250,-3.974)
N9: (92.346,120.748,-5.241)
O5': (93.198,119.542,-9.003)
O3': (91.188,123.245,-8.574)
OP2: (95.451,118.427,-9.063)
C3': (92.030,122.097,-8.650)
C1': (91.792,121.419,-6.415)
C5': (91.794,119.655,-9.337)
O4': (91.052,120.490,-7.182)
C8: (93.016,119.553,-5.175)
O2': (93.400,123.176,-6.882)
C6: (93.145,120.598,-1.824)
C5: (93.005,120.313,-3.192)
C4: (92.318,121.234,-3.956)
P: (94.001,118.197,-9.277)
C4': (91.184,120.825,-8.598)
C2': (92.848,121.973,-7.368)
C2: (91.942,122.529,-2.218)
N1: (92.585,121.735,-1.359)
N3: (91.754,122.377,-3.526)
N6: (93.805,119.814,-0.972)
N7: (93.438,119.250,-3.974)
N9: (92.346,120.748,-5.241)
O5': (93.198,119.542,-9.003)
O3': (91.188,123.245,-8.574)
OP1: (96.615,122.503,5.192)
OP2: (97.110,123.723,3.000)
C3': (98.915,119.728,1.293)
C1': (98.049,119.189,-0.829)
C5': (96.658,120.845,1.769)
O4': (96.960,119.154,0.076)
C8: (97.675,118.968,-3.326)
O2': (100.397,119.774,-0.671)
C6: (95.784,121.768,-4.306)
C5: (96.541,120.712,-3.765)
C4: (96.822,120.768,-2.412)
P: (96.455,122.601,3.726)
C4': (97.402,119.587,1.391)
C2': (99.106,120.083,-0.182)
C2: (95.749,122.676,-2.182)
N1: (95.399,122.756,-3.470)
N3: (96.450,121.732,-1.555)
N6: (95.423,121.843,-5.589)
N7: (97.089,119.571,-4.332)
N9: (97.545,119.630,-2.132)
O5': (96.999,121.239,3.110)
O3': (99.503,118.459,1.571)
OP2: (97.110,123.723,3.000)
C3': (98.915,119.728,1.293)
C1': (98.049,119.189,-0.829)
C5': (96.658,120.845,1.769)
O4': (96.960,119.154,0.076)
C8: (97.675,118.968,-3.326)
O2': (100.397,119.774,-0.671)
C6: (95.784,121.768,-4.306)
C5: (96.541,120.712,-3.765)
C4: (96.822,120.768,-2.412)
P: (96.455,122.601,3.726)
C4': (97.402,119.587,1.391)
C2': (99.106,120.083,-0.182)
C2: (95.749,122.676,-2.182)
N1: (95.399,122.756,-3.470)
N3: (96.450,121.732,-1.555)
N6: (95.423,121.843,-5.589)
N7: (97.089,119.571,-4.332)
N9: (97.545,119.630,-2.132)
O5': (96.999,121.239,3.110)
O3': (99.503,118.459,1.571)
Image (generated by PyMOL):