Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:070:085
Extra
PDB:
ATOM 1 O3' G A 69 28.117 154.844 22.009 1.00 62.68 O
ATOM 2 P A A 70 27.072 156.045 21.775 1.00 64.15 P
ATOM 3 OP1 A A 70 25.770 155.649 22.359 1.00 63.42 O
ATOM 4 OP2 A A 70 27.146 156.445 20.343 1.00 66.29 O
ATOM 5 O5' A A 70 27.645 157.237 22.662 1.00 62.57 O
ATOM 6 C5' A A 70 27.921 157.044 24.055 1.00 62.20 C
ATOM 7 C4' A A 70 28.353 158.341 24.692 1.00 61.72 C
ATOM 8 O4' A A 70 29.614 158.773 24.107 1.00 61.92 O
ATOM 9 C3' A A 70 27.386 159.506 24.527 1.00 60.47 C
ATOM 10 O3' A A 70 27.466 160.335 25.672 1.00 60.28 O
ATOM 11 C2' A A 70 27.969 160.245 23.330 1.00 61.93 C
ATOM 12 O2' A A 70 27.635 161.614 23.303 1.00 64.76 O
ATOM 13 C1' A A 70 29.464 160.073 23.574 1.00 62.64 C
ATOM 14 N9 A A 70 30.291 160.174 22.372 1.00 63.17 N
ATOM 15 C8 A A 70 30.100 159.559 21.159 1.00 64.24 C
ATOM 16 N7 A A 70 31.040 159.815 20.283 1.00 64.18 N
ATOM 17 C5 A A 70 31.904 160.665 20.958 1.00 63.93 C
ATOM 18 C6 A A 70 33.103 161.291 20.577 1.00 63.39 C
ATOM 19 N6 A A 70 33.665 161.141 19.380 1.00 64.39 N
ATOM 20 N1 A A 70 33.714 162.083 21.482 1.00 63.61 N
ATOM 21 C2 A A 70 33.153 162.228 22.686 1.00 63.91 C
ATOM 22 N3 A A 70 32.033 161.688 23.167 1.00 64.89 N
ATOM 23 C4 A A 70 31.449 160.905 22.242 1.00 64.23 C
ATOM 24 P G A 71 26.529 160.039 26.944 1.00 62.12 P
ATOM 25 OP1 G A 71 25.363 159.227 26.490 1.00 61.36 O
ATOM 26 OP2 G A 71 26.304 161.328 27.645 1.00 59.86 O
ATOM 27 O5' G A 71 27.418 159.104 27.882 1.00 61.52 O
TER
ATOM 1 O3' G B 84 36.963 165.677 19.409 1.00 74.14 O
ATOM 2 P A B 85 36.636 166.884 18.392 1.00 76.10 P
ATOM 3 OP1 A B 85 37.934 167.495 17.987 1.00 74.59 O
ATOM 4 OP2 A B 85 35.570 167.742 19.000 1.00 74.91 O
ATOM 5 O5' A B 85 35.993 166.143 17.137 1.00 78.14 O
ATOM 6 C5' A B 85 34.830 165.295 17.294 1.00 81.24 C
ATOM 7 C4' A B 85 33.923 165.431 16.094 1.00 82.93 C
ATOM 8 O4' A B 85 32.803 164.506 16.216 1.00 83.14 O
ATOM 9 C3' A B 85 33.309 166.817 15.909 1.00 84.35 C
ATOM 10 O3' A B 85 33.159 167.106 14.516 1.00 86.32 O
ATOM 11 C2' A B 85 31.940 166.659 16.561 1.00 83.45 C
ATOM 12 O2' A B 85 31.010 167.613 16.083 1.00 82.97 O
ATOM 13 C1' A B 85 31.588 165.226 16.149 1.00 83.07 C
ATOM 14 N9 A B 85 30.591 164.546 16.981 1.00 82.33 N
ATOM 15 C8 A B 85 29.426 163.959 16.548 1.00 81.51 C
ATOM 16 N7 A B 85 28.701 163.443 17.509 1.00 81.12 N
ATOM 17 C5 A B 85 29.437 163.702 18.657 1.00 82.10 C
ATOM 18 C6 A B 85 29.202 163.421 20.019 1.00 82.28 C
ATOM 19 N6 A B 85 28.115 162.789 20.470 1.00 81.63 N
ATOM 20 N1 A B 85 30.134 163.820 20.912 1.00 82.05 N
ATOM 21 C2 A B 85 31.227 164.451 20.458 1.00 81.94 C
ATOM 22 N3 A B 85 31.562 164.772 19.208 1.00 82.22 N
ATOM 23 C4 A B 85 30.611 164.369 18.346 1.00 82.30 C
ATOM 24 P A B 86 34.020 168.290 13.844 1.00 86.69 P
ATOM 25 OP1 A B 86 34.107 169.442 14.786 1.00 85.90 O
ATOM 26 OP2 A B 86 33.439 168.489 12.493 1.00 87.69 O
ATOM 27 O5' A B 86 35.476 167.667 13.667 1.00 84.30 O
TER
ATOM 2 P A A 70 27.072 156.045 21.775 1.00 64.15 P
ATOM 3 OP1 A A 70 25.770 155.649 22.359 1.00 63.42 O
ATOM 4 OP2 A A 70 27.146 156.445 20.343 1.00 66.29 O
ATOM 5 O5' A A 70 27.645 157.237 22.662 1.00 62.57 O
ATOM 6 C5' A A 70 27.921 157.044 24.055 1.00 62.20 C
ATOM 7 C4' A A 70 28.353 158.341 24.692 1.00 61.72 C
ATOM 8 O4' A A 70 29.614 158.773 24.107 1.00 61.92 O
ATOM 9 C3' A A 70 27.386 159.506 24.527 1.00 60.47 C
ATOM 10 O3' A A 70 27.466 160.335 25.672 1.00 60.28 O
ATOM 11 C2' A A 70 27.969 160.245 23.330 1.00 61.93 C
ATOM 12 O2' A A 70 27.635 161.614 23.303 1.00 64.76 O
ATOM 13 C1' A A 70 29.464 160.073 23.574 1.00 62.64 C
ATOM 14 N9 A A 70 30.291 160.174 22.372 1.00 63.17 N
ATOM 15 C8 A A 70 30.100 159.559 21.159 1.00 64.24 C
ATOM 16 N7 A A 70 31.040 159.815 20.283 1.00 64.18 N
ATOM 17 C5 A A 70 31.904 160.665 20.958 1.00 63.93 C
ATOM 18 C6 A A 70 33.103 161.291 20.577 1.00 63.39 C
ATOM 19 N6 A A 70 33.665 161.141 19.380 1.00 64.39 N
ATOM 20 N1 A A 70 33.714 162.083 21.482 1.00 63.61 N
ATOM 21 C2 A A 70 33.153 162.228 22.686 1.00 63.91 C
ATOM 22 N3 A A 70 32.033 161.688 23.167 1.00 64.89 N
ATOM 23 C4 A A 70 31.449 160.905 22.242 1.00 64.23 C
ATOM 24 P G A 71 26.529 160.039 26.944 1.00 62.12 P
ATOM 25 OP1 G A 71 25.363 159.227 26.490 1.00 61.36 O
ATOM 26 OP2 G A 71 26.304 161.328 27.645 1.00 59.86 O
ATOM 27 O5' G A 71 27.418 159.104 27.882 1.00 61.52 O
TER
ATOM 1 O3' G B 84 36.963 165.677 19.409 1.00 74.14 O
ATOM 2 P A B 85 36.636 166.884 18.392 1.00 76.10 P
ATOM 3 OP1 A B 85 37.934 167.495 17.987 1.00 74.59 O
ATOM 4 OP2 A B 85 35.570 167.742 19.000 1.00 74.91 O
ATOM 5 O5' A B 85 35.993 166.143 17.137 1.00 78.14 O
ATOM 6 C5' A B 85 34.830 165.295 17.294 1.00 81.24 C
ATOM 7 C4' A B 85 33.923 165.431 16.094 1.00 82.93 C
ATOM 8 O4' A B 85 32.803 164.506 16.216 1.00 83.14 O
ATOM 9 C3' A B 85 33.309 166.817 15.909 1.00 84.35 C
ATOM 10 O3' A B 85 33.159 167.106 14.516 1.00 86.32 O
ATOM 11 C2' A B 85 31.940 166.659 16.561 1.00 83.45 C
ATOM 12 O2' A B 85 31.010 167.613 16.083 1.00 82.97 O
ATOM 13 C1' A B 85 31.588 165.226 16.149 1.00 83.07 C
ATOM 14 N9 A B 85 30.591 164.546 16.981 1.00 82.33 N
ATOM 15 C8 A B 85 29.426 163.959 16.548 1.00 81.51 C
ATOM 16 N7 A B 85 28.701 163.443 17.509 1.00 81.12 N
ATOM 17 C5 A B 85 29.437 163.702 18.657 1.00 82.10 C
ATOM 18 C6 A B 85 29.202 163.421 20.019 1.00 82.28 C
ATOM 19 N6 A B 85 28.115 162.789 20.470 1.00 81.63 N
ATOM 20 N1 A B 85 30.134 163.820 20.912 1.00 82.05 N
ATOM 21 C2 A B 85 31.227 164.451 20.458 1.00 81.94 C
ATOM 22 N3 A B 85 31.562 164.772 19.208 1.00 82.22 N
ATOM 23 C4 A B 85 30.611 164.369 18.346 1.00 82.30 C
ATOM 24 P A B 86 34.020 168.290 13.844 1.00 86.69 P
ATOM 25 OP1 A B 86 34.107 169.442 14.786 1.00 85.90 O
ATOM 26 OP2 A B 86 33.439 168.489 12.493 1.00 87.69 O
ATOM 27 O5' A B 86 35.476 167.667 13.667 1.00 84.30 O
TER
Atoms:
OP1: (25.770,155.649,22.359)
OP2: (27.146,156.445,20.343)
C3': (27.386,159.506,24.527)
C1': (29.464,160.073,23.574)
C5': (27.921,157.044,24.055)
O4': (29.614,158.773,24.107)
C8: (30.100,159.559,21.159)
O2': (27.635,161.614,23.303)
C6: (33.103,161.291,20.577)
C5: (31.904,160.665,20.958)
C4: (31.449,160.905,22.242)
P: (27.072,156.045,21.775)
C4': (28.353,158.341,24.692)
C2': (27.969,160.245,23.330)
C2: (33.153,162.228,22.686)
N1: (33.714,162.083,21.482)
N3: (32.033,161.688,23.167)
N6: (33.665,161.141,19.380)
N7: (31.040,159.815,20.283)
N9: (30.291,160.174,22.372)
O5': (27.645,157.237,22.662)
O3': (27.466,160.335,25.672)
OP2: (27.146,156.445,20.343)
C3': (27.386,159.506,24.527)
C1': (29.464,160.073,23.574)
C5': (27.921,157.044,24.055)
O4': (29.614,158.773,24.107)
C8: (30.100,159.559,21.159)
O2': (27.635,161.614,23.303)
C6: (33.103,161.291,20.577)
C5: (31.904,160.665,20.958)
C4: (31.449,160.905,22.242)
P: (27.072,156.045,21.775)
C4': (28.353,158.341,24.692)
C2': (27.969,160.245,23.330)
C2: (33.153,162.228,22.686)
N1: (33.714,162.083,21.482)
N3: (32.033,161.688,23.167)
N6: (33.665,161.141,19.380)
N7: (31.040,159.815,20.283)
N9: (30.291,160.174,22.372)
O5': (27.645,157.237,22.662)
O3': (27.466,160.335,25.672)
OP1: (37.934,167.495,17.987)
OP2: (35.570,167.742,19.000)
C3': (33.309,166.817,15.909)
C1': (31.588,165.226,16.149)
C5': (34.830,165.295,17.294)
O4': (32.803,164.506,16.216)
C8: (29.426,163.959,16.548)
O2': (31.010,167.613,16.083)
C6: (29.202,163.421,20.019)
C5: (29.437,163.702,18.657)
C4: (30.611,164.369,18.346)
P: (36.636,166.884,18.392)
C4': (33.923,165.431,16.094)
C2': (31.940,166.659,16.561)
C2: (31.227,164.451,20.458)
N1: (30.134,163.820,20.912)
N3: (31.562,164.772,19.208)
N6: (28.115,162.789,20.470)
N7: (28.701,163.443,17.509)
N9: (30.591,164.546,16.981)
O5': (35.993,166.143,17.137)
O3': (33.159,167.106,14.516)
OP2: (35.570,167.742,19.000)
C3': (33.309,166.817,15.909)
C1': (31.588,165.226,16.149)
C5': (34.830,165.295,17.294)
O4': (32.803,164.506,16.216)
C8: (29.426,163.959,16.548)
O2': (31.010,167.613,16.083)
C6: (29.202,163.421,20.019)
C5: (29.437,163.702,18.657)
C4: (30.611,164.369,18.346)
P: (36.636,166.884,18.392)
C4': (33.923,165.431,16.094)
C2': (31.940,166.659,16.561)
C2: (31.227,164.451,20.458)
N1: (30.134,163.820,20.912)
N3: (31.562,164.772,19.208)
N6: (28.115,162.789,20.470)
N7: (28.701,163.443,17.509)
N9: (30.591,164.546,16.981)
O5': (35.993,166.143,17.137)
O3': (33.159,167.106,14.516)
Image (generated by PyMOL):