ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01077:01078

Extra

PDB:
ATOM 1 O3' A A1076 36.393 105.221 143.989 1.00 38.28 O
ATOM 2 P A A1077 37.892 105.570 144.449 1.00 41.96 P
ATOM 3 OP1 A A1077 38.303 104.601 145.489 1.00 40.91 O
ATOM 4 OP2 A A1077 37.934 107.029 144.738 1.00 40.61 O
ATOM 5 O5' A A1077 38.777 105.270 143.159 1.00 40.69 O
ATOM 6 C5' A A1077 38.671 106.094 141.996 1.00 38.41 C
ATOM 7 C4' A A1077 39.446 105.495 140.853 1.00 37.71 C
ATOM 8 O4' A A1077 38.907 104.179 140.512 1.00 37.55 O
ATOM 9 C3' A A1077 39.332 106.291 139.563 1.00 36.88 C
ATOM 10 O3' A A1077 40.150 107.431 139.472 1.00 37.04 O
ATOM 11 C2' A A1077 39.504 105.222 138.501 1.00 37.33 C
ATOM 12 O2' A A1077 40.845 104.827 138.325 1.00 35.10 O
ATOM 13 C1' A A1077 38.632 104.127 139.116 1.00 37.89 C
ATOM 14 N9 A A1077 37.221 104.488 138.942 1.00 39.80 N
ATOM 15 C8 A A1077 36.673 105.760 138.840 1.00 41.13 C
ATOM 16 N7 A A1077 35.377 105.774 138.689 1.00 38.73 N
ATOM 17 C5 A A1077 35.040 104.437 138.694 1.00 39.89 C
ATOM 18 C6 A A1077 33.819 103.804 138.579 1.00 42.11 C
ATOM 19 N6 A A1077 32.671 104.460 138.447 1.00 41.63 N
ATOM 20 N1 A A1077 33.811 102.455 138.611 1.00 45.79 N
ATOM 21 C2 A A1077 34.987 101.805 138.762 1.00 45.70 C
ATOM 22 N3 A A1077 36.212 102.296 138.895 1.00 39.60 N
ATOM 23 C4 A A1077 36.168 103.632 138.848 1.00 39.72 C
ATOM 24 P G A1078 39.455 108.868 139.281 1.00 38.48 P
ATOM 25 OP1 G A1078 40.549 109.856 139.104 1.00 38.53 O
ATOM 26 OP2 G A1078 38.457 109.069 140.365 1.00 39.23 O
ATOM 27 O5' G A1078 38.697 108.726 137.885 1.00 37.30 O
TER

ATOM 1 O3' A B1077 40.150 107.431 139.472 1.00 37.04 O
ATOM 2 P G B1078 39.455 108.868 139.281 1.00 38.48 P
ATOM 3 OP1 G B1078 40.549 109.856 139.104 1.00 38.53 O
ATOM 4 OP2 G B1078 38.457 109.069 140.365 1.00 39.23 O
ATOM 5 O5' G B1078 38.697 108.726 137.885 1.00 37.30 O
ATOM 6 C5' G B1078 37.265 108.695 137.794 1.00 34.54 C
ATOM 7 C4' G B1078 36.863 108.239 136.415 1.00 33.98 C
ATOM 8 O4' G B1078 35.417 108.193 136.298 1.00 33.18 O
ATOM 9 C3' G B1078 37.332 109.141 135.280 1.00 34.74 C
ATOM 10 O3' G B1078 37.529 108.329 134.136 1.00 36.76 O
ATOM 11 C2' G B1078 36.120 110.025 135.035 1.00 32.35 C
ATOM 12 O2' G B1078 36.097 110.574 133.737 1.00 31.32 O
ATOM 13 C1' G B1078 35.009 109.000 135.214 1.00 31.43 C
ATOM 14 N9 G B1078 33.655 109.484 135.466 1.00 30.63 N
ATOM 15 C8 G B1078 33.240 110.746 135.810 1.00 31.12 C
ATOM 16 N7 G B1078 31.944 110.839 135.926 1.00 31.55 N
ATOM 17 C5 G B1078 31.484 109.561 135.647 1.00 27.98 C
ATOM 18 C6 G B1078 30.172 109.047 135.601 1.00 28.46 C
ATOM 19 O6 G B1078 29.107 109.636 135.786 1.00 30.42 O
ATOM 20 N1 G B1078 30.166 107.696 135.293 1.00 28.54 N
ATOM 21 C2 G B1078 31.280 106.944 135.050 1.00 28.37 C
ATOM 22 N2 G B1078 31.093 105.672 134.785 1.00 26.41 N
ATOM 23 N3 G B1078 32.497 107.412 135.072 1.00 30.03 N
ATOM 24 C4 G B1078 32.528 108.719 135.375 1.00 28.99 C
ATOM 25 P U B1079 39.008 107.912 133.707 1.00 38.49 P
ATOM 26 OP1 U B1079 39.970 108.906 134.259 1.00 40.07 O
ATOM 27 OP2 U B1079 38.953 107.669 132.244 1.00 36.44 O
ATOM 28 O5' U B1079 39.225 106.520 134.437 1.00 35.94 O
TER

Atoms:
OP1: (38.303,104.601,145.489)
OP2: (37.934,107.029,144.738)
C3': (39.332,106.291,139.563)
C1': (38.632,104.127,139.116)
C5': (38.671,106.094,141.996)
O4': (38.907,104.179,140.512)
C8: (36.673,105.760,138.840)
O2': (40.845,104.827,138.325)
C6: (33.819,103.804,138.579)
C5: (35.040,104.437,138.694)
C4: (36.168,103.632,138.848)
P: (37.892,105.570,144.449)
C4': (39.446,105.495,140.853)
C2': (39.504,105.222,138.501)
C2: (34.987,101.805,138.762)
N1: (33.811,102.455,138.611)
N3: (36.212,102.296,138.895)
N6: (32.671,104.460,138.447)
N7: (35.377,105.774,138.689)
N9: (37.221,104.488,138.942)
O5': (38.777,105.270,143.159)
O3': (40.150,107.431,139.472)
OP1: (40.549,109.856,139.104)
OP2: (38.457,109.069,140.365)
C3': (37.332,109.141,135.280)
C1': (35.009,109.000,135.214)
C5': (37.265,108.695,137.794)
O6: (29.107,109.636,135.786)
O4': (35.417,108.193,136.298)
C8: (33.240,110.746,135.810)
C2: (31.280,106.944,135.050)
C6: (30.172,109.047,135.601)
C5: (31.484,109.561,135.647)
C4: (32.528,108.719,135.375)
P: (39.455,108.868,139.281)
C4': (36.863,108.239,136.415)
C2': (36.120,110.025,135.035)
O2': (36.097,110.574,133.737)
N1: (30.166,107.696,135.293)
N2: (31.093,105.672,134.785)
N3: (32.497,107.412,135.072)
N7: (31.944,110.839,135.926)
N9: (33.655,109.484,135.466)
O5': (38.697,108.726,137.885)
O3': (37.529,108.329,134.136)
Image (generated by PyMOL):
PyMOL image
show in jmol