Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0366:0398
Extra
PDB:
ATOM 1 O3' C A 365 92.606 102.137 5.837 1.00 56.73 O
ATOM 2 P A A 366 92.707 101.601 7.349 1.00 59.29 P
ATOM 3 OP1 A A 366 93.396 102.656 8.135 1.00 58.20 O
ATOM 4 OP2 A A 366 93.260 100.217 7.339 1.00 56.72 O
ATOM 5 O5' A A 366 91.184 101.535 7.824 1.00 57.31 O
ATOM 6 C5' A A 366 90.389 102.737 7.925 1.00 55.92 C
ATOM 7 C4' A A 366 88.980 102.412 8.368 1.00 55.03 C
ATOM 8 O4' A A 366 88.274 101.707 7.319 1.00 55.88 O
ATOM 9 C3' A A 366 88.856 101.510 9.582 1.00 54.94 C
ATOM 10 O3' A A 366 89.014 102.254 10.780 1.00 54.22 O
ATOM 11 C2' A A 366 87.455 100.927 9.419 1.00 55.66 C
ATOM 12 O2' A A 366 86.415 101.777 9.867 1.00 57.14 O
ATOM 13 C1' A A 366 87.369 100.777 7.897 1.00 55.44 C
ATOM 14 N9 A A 366 87.715 99.435 7.427 1.00 54.65 N
ATOM 15 C8 A A 366 88.961 98.891 7.201 1.00 53.96 C
ATOM 16 N7 A A 366 88.927 97.645 6.797 1.00 52.44 N
ATOM 17 C5 A A 366 87.571 97.347 6.751 1.00 53.52 C
ATOM 18 C6 A A 366 86.869 96.179 6.407 1.00 53.35 C
ATOM 19 N6 A A 366 87.459 95.040 6.040 1.00 54.04 N
ATOM 20 N1 A A 366 85.520 96.220 6.459 1.00 53.59 N
ATOM 21 C2 A A 366 84.926 97.359 6.842 1.00 53.20 C
ATOM 22 N3 A A 366 85.474 98.516 7.197 1.00 53.03 N
ATOM 23 C4 A A 366 86.815 98.443 7.129 1.00 53.70 C
ATOM 24 P G A 367 89.295 101.492 12.161 1.00 54.27 P
ATOM 25 OP1 G A 367 90.508 100.651 12.006 1.00 51.96 O
ATOM 26 OP2 G A 367 88.012 100.872 12.586 1.00 54.86 O
ATOM 27 O5' G A 367 89.639 102.665 13.180 1.00 52.25 O
TER
ATOM 1 O3' U B 397 92.692 92.950 9.281 1.00 63.11 O
ATOM 2 P A B 398 92.553 92.592 7.726 1.00 62.71 P
ATOM 3 OP1 A B 398 93.629 91.638 7.344 1.00 63.64 O
ATOM 4 OP2 A B 398 92.398 93.866 6.978 1.00 64.24 O
ATOM 5 O5' A B 398 91.157 91.836 7.670 1.00 63.42 O
ATOM 6 C5' A B 398 90.945 90.629 8.420 1.00 63.80 C
ATOM 7 C4' A B 398 89.482 90.276 8.423 1.00 64.44 C
ATOM 8 O4' A B 398 88.767 91.168 9.324 1.00 64.57 O
ATOM 9 C3' A B 398 88.795 90.398 7.067 1.00 65.03 C
ATOM 10 O3' A B 398 87.814 89.381 6.928 1.00 67.45 O
ATOM 11 C2' A B 398 88.126 91.766 7.162 1.00 63.92 C
ATOM 12 O2' A B 398 87.003 91.906 6.321 1.00 63.60 O
ATOM 13 C1' A B 398 87.707 91.786 8.627 1.00 63.92 C
ATOM 14 N9 A B 398 87.499 93.129 9.167 1.00 64.11 N
ATOM 15 C8 A B 398 88.427 94.103 9.455 1.00 63.45 C
ATOM 16 N7 A B 398 87.902 95.217 9.906 1.00 62.74 N
ATOM 17 C5 A B 398 86.537 94.959 9.923 1.00 64.30 C
ATOM 18 C6 A B 398 85.424 95.742 10.294 1.00 65.42 C
ATOM 19 N6 A B 398 85.519 97.000 10.742 1.00 65.84 N
ATOM 20 N1 A B 398 84.195 95.181 10.189 1.00 65.05 N
ATOM 21 C2 A B 398 84.102 93.923 9.742 1.00 63.79 C
ATOM 22 N3 A B 398 85.069 93.088 9.364 1.00 64.15 N
ATOM 23 C4 A B 398 86.276 93.674 9.478 1.00 64.17 C
ATOM 24 P A B 399 88.050 88.185 5.883 1.00 68.00 P
ATOM 25 OP1 A B 399 88.583 88.757 4.615 1.00 67.90 O
ATOM 26 OP2 A B 399 86.802 87.376 5.855 1.00 67.31 O
ATOM 27 O5' A B 399 89.210 87.330 6.558 1.00 67.41 O
TER
ATOM 2 P A A 366 92.707 101.601 7.349 1.00 59.29 P
ATOM 3 OP1 A A 366 93.396 102.656 8.135 1.00 58.20 O
ATOM 4 OP2 A A 366 93.260 100.217 7.339 1.00 56.72 O
ATOM 5 O5' A A 366 91.184 101.535 7.824 1.00 57.31 O
ATOM 6 C5' A A 366 90.389 102.737 7.925 1.00 55.92 C
ATOM 7 C4' A A 366 88.980 102.412 8.368 1.00 55.03 C
ATOM 8 O4' A A 366 88.274 101.707 7.319 1.00 55.88 O
ATOM 9 C3' A A 366 88.856 101.510 9.582 1.00 54.94 C
ATOM 10 O3' A A 366 89.014 102.254 10.780 1.00 54.22 O
ATOM 11 C2' A A 366 87.455 100.927 9.419 1.00 55.66 C
ATOM 12 O2' A A 366 86.415 101.777 9.867 1.00 57.14 O
ATOM 13 C1' A A 366 87.369 100.777 7.897 1.00 55.44 C
ATOM 14 N9 A A 366 87.715 99.435 7.427 1.00 54.65 N
ATOM 15 C8 A A 366 88.961 98.891 7.201 1.00 53.96 C
ATOM 16 N7 A A 366 88.927 97.645 6.797 1.00 52.44 N
ATOM 17 C5 A A 366 87.571 97.347 6.751 1.00 53.52 C
ATOM 18 C6 A A 366 86.869 96.179 6.407 1.00 53.35 C
ATOM 19 N6 A A 366 87.459 95.040 6.040 1.00 54.04 N
ATOM 20 N1 A A 366 85.520 96.220 6.459 1.00 53.59 N
ATOM 21 C2 A A 366 84.926 97.359 6.842 1.00 53.20 C
ATOM 22 N3 A A 366 85.474 98.516 7.197 1.00 53.03 N
ATOM 23 C4 A A 366 86.815 98.443 7.129 1.00 53.70 C
ATOM 24 P G A 367 89.295 101.492 12.161 1.00 54.27 P
ATOM 25 OP1 G A 367 90.508 100.651 12.006 1.00 51.96 O
ATOM 26 OP2 G A 367 88.012 100.872 12.586 1.00 54.86 O
ATOM 27 O5' G A 367 89.639 102.665 13.180 1.00 52.25 O
TER
ATOM 1 O3' U B 397 92.692 92.950 9.281 1.00 63.11 O
ATOM 2 P A B 398 92.553 92.592 7.726 1.00 62.71 P
ATOM 3 OP1 A B 398 93.629 91.638 7.344 1.00 63.64 O
ATOM 4 OP2 A B 398 92.398 93.866 6.978 1.00 64.24 O
ATOM 5 O5' A B 398 91.157 91.836 7.670 1.00 63.42 O
ATOM 6 C5' A B 398 90.945 90.629 8.420 1.00 63.80 C
ATOM 7 C4' A B 398 89.482 90.276 8.423 1.00 64.44 C
ATOM 8 O4' A B 398 88.767 91.168 9.324 1.00 64.57 O
ATOM 9 C3' A B 398 88.795 90.398 7.067 1.00 65.03 C
ATOM 10 O3' A B 398 87.814 89.381 6.928 1.00 67.45 O
ATOM 11 C2' A B 398 88.126 91.766 7.162 1.00 63.92 C
ATOM 12 O2' A B 398 87.003 91.906 6.321 1.00 63.60 O
ATOM 13 C1' A B 398 87.707 91.786 8.627 1.00 63.92 C
ATOM 14 N9 A B 398 87.499 93.129 9.167 1.00 64.11 N
ATOM 15 C8 A B 398 88.427 94.103 9.455 1.00 63.45 C
ATOM 16 N7 A B 398 87.902 95.217 9.906 1.00 62.74 N
ATOM 17 C5 A B 398 86.537 94.959 9.923 1.00 64.30 C
ATOM 18 C6 A B 398 85.424 95.742 10.294 1.00 65.42 C
ATOM 19 N6 A B 398 85.519 97.000 10.742 1.00 65.84 N
ATOM 20 N1 A B 398 84.195 95.181 10.189 1.00 65.05 N
ATOM 21 C2 A B 398 84.102 93.923 9.742 1.00 63.79 C
ATOM 22 N3 A B 398 85.069 93.088 9.364 1.00 64.15 N
ATOM 23 C4 A B 398 86.276 93.674 9.478 1.00 64.17 C
ATOM 24 P A B 399 88.050 88.185 5.883 1.00 68.00 P
ATOM 25 OP1 A B 399 88.583 88.757 4.615 1.00 67.90 O
ATOM 26 OP2 A B 399 86.802 87.376 5.855 1.00 67.31 O
ATOM 27 O5' A B 399 89.210 87.330 6.558 1.00 67.41 O
TER
Atoms:
OP1: (93.396,102.656,8.135)
OP2: (93.260,100.217,7.339)
C3': (88.856,101.510,9.582)
C1': (87.369,100.777,7.897)
C5': (90.389,102.737,7.925)
O4': (88.274,101.707,7.319)
C8: (88.961,98.891,7.201)
O2': (86.415,101.777,9.867)
C6: (86.869,96.179,6.407)
C5: (87.571,97.347,6.751)
C4: (86.815,98.443,7.129)
P: (92.707,101.601,7.349)
C4': (88.980,102.412,8.368)
C2': (87.455,100.927,9.419)
C2: (84.926,97.359,6.842)
N1: (85.520,96.220,6.459)
N3: (85.474,98.516,7.197)
N6: (87.459,95.040,6.040)
N7: (88.927,97.645,6.797)
N9: (87.715,99.435,7.427)
O5': (91.184,101.535,7.824)
O3': (89.014,102.254,10.780)
OP2: (93.260,100.217,7.339)
C3': (88.856,101.510,9.582)
C1': (87.369,100.777,7.897)
C5': (90.389,102.737,7.925)
O4': (88.274,101.707,7.319)
C8: (88.961,98.891,7.201)
O2': (86.415,101.777,9.867)
C6: (86.869,96.179,6.407)
C5: (87.571,97.347,6.751)
C4: (86.815,98.443,7.129)
P: (92.707,101.601,7.349)
C4': (88.980,102.412,8.368)
C2': (87.455,100.927,9.419)
C2: (84.926,97.359,6.842)
N1: (85.520,96.220,6.459)
N3: (85.474,98.516,7.197)
N6: (87.459,95.040,6.040)
N7: (88.927,97.645,6.797)
N9: (87.715,99.435,7.427)
O5': (91.184,101.535,7.824)
O3': (89.014,102.254,10.780)
OP1: (93.629,91.638,7.344)
OP2: (92.398,93.866,6.978)
C3': (88.795,90.398,7.067)
C1': (87.707,91.786,8.627)
C5': (90.945,90.629,8.420)
O4': (88.767,91.168,9.324)
C8: (88.427,94.103,9.455)
O2': (87.003,91.906,6.321)
C6: (85.424,95.742,10.294)
C5: (86.537,94.959,9.923)
C4: (86.276,93.674,9.478)
P: (92.553,92.592,7.726)
C4': (89.482,90.276,8.423)
C2': (88.126,91.766,7.162)
C2: (84.102,93.923,9.742)
N1: (84.195,95.181,10.189)
N3: (85.069,93.088,9.364)
N6: (85.519,97.000,10.742)
N7: (87.902,95.217,9.906)
N9: (87.499,93.129,9.167)
O5': (91.157,91.836,7.670)
O3': (87.814,89.381,6.928)
OP2: (92.398,93.866,6.978)
C3': (88.795,90.398,7.067)
C1': (87.707,91.786,8.627)
C5': (90.945,90.629,8.420)
O4': (88.767,91.168,9.324)
C8: (88.427,94.103,9.455)
O2': (87.003,91.906,6.321)
C6: (85.424,95.742,10.294)
C5: (86.537,94.959,9.923)
C4: (86.276,93.674,9.478)
P: (92.553,92.592,7.726)
C4': (89.482,90.276,8.423)
C2': (88.126,91.766,7.162)
C2: (84.102,93.923,9.742)
N1: (84.195,95.181,10.189)
N3: (85.069,93.088,9.364)
N6: (85.519,97.000,10.742)
N7: (87.902,95.217,9.906)
N9: (87.499,93.129,9.167)
O5': (91.157,91.836,7.670)
O3': (87.814,89.381,6.928)
Image (generated by PyMOL):