Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01190:02394
Extra
PDB:
ATOM 1 O3' A A1189 51.948 108.186 135.239 1.00 42.72 O
ATOM 2 P A A1190 52.421 109.698 135.510 1.00 43.11 P
ATOM 3 OP1 A A1190 52.861 109.815 136.916 1.00 44.75 O
ATOM 4 OP2 A A1190 51.366 110.605 135.002 1.00 42.06 O
ATOM 5 O5' A A1190 53.723 109.865 134.604 1.00 43.39 O
ATOM 6 C5' A A1190 53.623 110.165 133.193 1.00 42.80 C
ATOM 7 C4' A A1190 54.649 111.202 132.815 1.00 42.01 C
ATOM 8 O4' A A1190 55.972 110.635 132.943 1.00 42.18 O
ATOM 9 C3' A A1190 54.633 111.675 131.375 1.00 42.25 C
ATOM 10 O3' A A1190 53.603 112.649 131.189 1.00 42.64 O
ATOM 11 C2' A A1190 56.029 112.280 131.230 1.00 42.34 C
ATOM 12 O2' A A1190 56.145 113.577 131.775 1.00 43.19 O
ATOM 13 C1' A A1190 56.861 111.343 132.105 1.00 42.57 C
ATOM 14 N9 A A1190 57.691 110.383 131.383 1.00 44.14 N
ATOM 15 C8 A A1190 57.391 109.648 130.264 1.00 44.81 C
ATOM 16 N7 A A1190 58.376 108.889 129.852 1.00 44.83 N
ATOM 17 C5 A A1190 59.390 109.136 130.765 1.00 45.36 C
ATOM 18 C6 A A1190 60.700 108.641 130.884 1.00 45.13 C
ATOM 19 N6 A A1190 61.238 107.753 130.048 1.00 43.22 N
ATOM 20 N1 A A1190 61.450 109.095 131.909 1.00 45.66 N
ATOM 21 C2 A A1190 60.914 109.978 132.754 1.00 45.29 C
ATOM 22 N3 A A1190 59.698 110.514 132.750 1.00 46.62 N
ATOM 23 C4 A A1190 58.979 110.048 131.716 1.00 45.47 C
ATOM 24 P A A1191 52.848 112.768 129.774 1.00 42.17 P
ATOM 25 OP1 A A1191 51.601 113.534 130.009 1.00 41.54 O
ATOM 26 OP2 A A1191 52.773 111.423 129.162 1.00 42.57 O
ATOM 27 O5' A A1191 53.811 113.691 128.903 1.00 41.47 O
TER
ATOM 1 O3' C B2393 58.322 115.761 134.241 1.00 42.41 O
ATOM 2 P A B2394 57.664 114.745 135.292 1.00 45.37 P
ATOM 3 OP1 A B2394 56.628 113.943 134.586 1.00 43.72 O
ATOM 4 OP2 A B2394 57.284 115.520 136.494 1.00 45.42 O
ATOM 5 O5' A B2394 58.883 113.799 135.676 1.00 44.03 O
ATOM 6 C5' A B2394 59.689 113.203 134.656 1.00 42.40 C
ATOM 7 C4' A B2394 61.151 113.449 134.935 1.00 43.77 C
ATOM 8 O4' A B2394 61.950 112.678 134.010 1.00 44.22 O
ATOM 9 C3' A B2394 61.645 114.881 134.790 1.00 44.26 C
ATOM 10 O3' A B2394 62.851 115.016 135.532 1.00 45.93 O
ATOM 11 C2' A B2394 61.989 114.942 133.311 1.00 45.37 C
ATOM 12 O2' A B2394 62.946 115.951 133.058 1.00 44.54 O
ATOM 13 C1' A B2394 62.575 113.544 133.086 1.00 46.02 C
ATOM 14 N9 A B2394 62.388 112.956 131.760 1.00 47.02 N
ATOM 15 C8 A B2394 63.322 112.241 131.058 1.00 48.37 C
ATOM 16 N7 A B2394 62.880 111.768 129.920 1.00 50.07 N
ATOM 17 C5 A B2394 61.568 112.215 129.859 1.00 48.12 C
ATOM 18 C6 A B2394 60.561 112.048 128.899 1.00 48.05 C
ATOM 19 N6 A B2394 60.732 111.368 127.763 1.00 46.61 N
ATOM 20 N1 A B2394 59.361 112.615 129.144 1.00 47.95 N
ATOM 21 C2 A B2394 59.202 113.309 130.279 1.00 47.02 C
ATOM 22 N3 A B2394 60.076 113.543 131.252 1.00 46.14 N
ATOM 23 C4 A B2394 61.254 112.959 130.980 1.00 46.60 C
ATOM 24 P U B2395 62.872 115.856 136.900 1.00 49.17 P
ATOM 25 OP1 U B2395 64.171 115.544 137.545 1.00 48.80 O
ATOM 26 OP2 U B2395 61.608 115.622 137.648 1.00 48.33 O
ATOM 27 O5' U B2395 62.919 117.373 136.422 1.00 47.17 O
TER
ATOM 2 P A A1190 52.421 109.698 135.510 1.00 43.11 P
ATOM 3 OP1 A A1190 52.861 109.815 136.916 1.00 44.75 O
ATOM 4 OP2 A A1190 51.366 110.605 135.002 1.00 42.06 O
ATOM 5 O5' A A1190 53.723 109.865 134.604 1.00 43.39 O
ATOM 6 C5' A A1190 53.623 110.165 133.193 1.00 42.80 C
ATOM 7 C4' A A1190 54.649 111.202 132.815 1.00 42.01 C
ATOM 8 O4' A A1190 55.972 110.635 132.943 1.00 42.18 O
ATOM 9 C3' A A1190 54.633 111.675 131.375 1.00 42.25 C
ATOM 10 O3' A A1190 53.603 112.649 131.189 1.00 42.64 O
ATOM 11 C2' A A1190 56.029 112.280 131.230 1.00 42.34 C
ATOM 12 O2' A A1190 56.145 113.577 131.775 1.00 43.19 O
ATOM 13 C1' A A1190 56.861 111.343 132.105 1.00 42.57 C
ATOM 14 N9 A A1190 57.691 110.383 131.383 1.00 44.14 N
ATOM 15 C8 A A1190 57.391 109.648 130.264 1.00 44.81 C
ATOM 16 N7 A A1190 58.376 108.889 129.852 1.00 44.83 N
ATOM 17 C5 A A1190 59.390 109.136 130.765 1.00 45.36 C
ATOM 18 C6 A A1190 60.700 108.641 130.884 1.00 45.13 C
ATOM 19 N6 A A1190 61.238 107.753 130.048 1.00 43.22 N
ATOM 20 N1 A A1190 61.450 109.095 131.909 1.00 45.66 N
ATOM 21 C2 A A1190 60.914 109.978 132.754 1.00 45.29 C
ATOM 22 N3 A A1190 59.698 110.514 132.750 1.00 46.62 N
ATOM 23 C4 A A1190 58.979 110.048 131.716 1.00 45.47 C
ATOM 24 P A A1191 52.848 112.768 129.774 1.00 42.17 P
ATOM 25 OP1 A A1191 51.601 113.534 130.009 1.00 41.54 O
ATOM 26 OP2 A A1191 52.773 111.423 129.162 1.00 42.57 O
ATOM 27 O5' A A1191 53.811 113.691 128.903 1.00 41.47 O
TER
ATOM 1 O3' C B2393 58.322 115.761 134.241 1.00 42.41 O
ATOM 2 P A B2394 57.664 114.745 135.292 1.00 45.37 P
ATOM 3 OP1 A B2394 56.628 113.943 134.586 1.00 43.72 O
ATOM 4 OP2 A B2394 57.284 115.520 136.494 1.00 45.42 O
ATOM 5 O5' A B2394 58.883 113.799 135.676 1.00 44.03 O
ATOM 6 C5' A B2394 59.689 113.203 134.656 1.00 42.40 C
ATOM 7 C4' A B2394 61.151 113.449 134.935 1.00 43.77 C
ATOM 8 O4' A B2394 61.950 112.678 134.010 1.00 44.22 O
ATOM 9 C3' A B2394 61.645 114.881 134.790 1.00 44.26 C
ATOM 10 O3' A B2394 62.851 115.016 135.532 1.00 45.93 O
ATOM 11 C2' A B2394 61.989 114.942 133.311 1.00 45.37 C
ATOM 12 O2' A B2394 62.946 115.951 133.058 1.00 44.54 O
ATOM 13 C1' A B2394 62.575 113.544 133.086 1.00 46.02 C
ATOM 14 N9 A B2394 62.388 112.956 131.760 1.00 47.02 N
ATOM 15 C8 A B2394 63.322 112.241 131.058 1.00 48.37 C
ATOM 16 N7 A B2394 62.880 111.768 129.920 1.00 50.07 N
ATOM 17 C5 A B2394 61.568 112.215 129.859 1.00 48.12 C
ATOM 18 C6 A B2394 60.561 112.048 128.899 1.00 48.05 C
ATOM 19 N6 A B2394 60.732 111.368 127.763 1.00 46.61 N
ATOM 20 N1 A B2394 59.361 112.615 129.144 1.00 47.95 N
ATOM 21 C2 A B2394 59.202 113.309 130.279 1.00 47.02 C
ATOM 22 N3 A B2394 60.076 113.543 131.252 1.00 46.14 N
ATOM 23 C4 A B2394 61.254 112.959 130.980 1.00 46.60 C
ATOM 24 P U B2395 62.872 115.856 136.900 1.00 49.17 P
ATOM 25 OP1 U B2395 64.171 115.544 137.545 1.00 48.80 O
ATOM 26 OP2 U B2395 61.608 115.622 137.648 1.00 48.33 O
ATOM 27 O5' U B2395 62.919 117.373 136.422 1.00 47.17 O
TER
Atoms:
OP1: (52.861,109.815,136.916)
OP2: (51.366,110.605,135.002)
C3': (54.633,111.675,131.375)
C1': (56.861,111.343,132.105)
C5': (53.623,110.165,133.193)
O4': (55.972,110.635,132.943)
C8: (57.391,109.648,130.264)
O2': (56.145,113.577,131.775)
C6: (60.700,108.641,130.884)
C5: (59.390,109.136,130.765)
C4: (58.979,110.048,131.716)
P: (52.421,109.698,135.510)
C4': (54.649,111.202,132.815)
C2': (56.029,112.280,131.230)
C2: (60.914,109.978,132.754)
N1: (61.450,109.095,131.909)
N3: (59.698,110.514,132.750)
N6: (61.238,107.753,130.048)
N7: (58.376,108.889,129.852)
N9: (57.691,110.383,131.383)
O5': (53.723,109.865,134.604)
O3': (53.603,112.649,131.189)
OP2: (51.366,110.605,135.002)
C3': (54.633,111.675,131.375)
C1': (56.861,111.343,132.105)
C5': (53.623,110.165,133.193)
O4': (55.972,110.635,132.943)
C8: (57.391,109.648,130.264)
O2': (56.145,113.577,131.775)
C6: (60.700,108.641,130.884)
C5: (59.390,109.136,130.765)
C4: (58.979,110.048,131.716)
P: (52.421,109.698,135.510)
C4': (54.649,111.202,132.815)
C2': (56.029,112.280,131.230)
C2: (60.914,109.978,132.754)
N1: (61.450,109.095,131.909)
N3: (59.698,110.514,132.750)
N6: (61.238,107.753,130.048)
N7: (58.376,108.889,129.852)
N9: (57.691,110.383,131.383)
O5': (53.723,109.865,134.604)
O3': (53.603,112.649,131.189)
OP1: (56.628,113.943,134.586)
OP2: (57.284,115.520,136.494)
C3': (61.645,114.881,134.790)
C1': (62.575,113.544,133.086)
C5': (59.689,113.203,134.656)
O4': (61.950,112.678,134.010)
C8: (63.322,112.241,131.058)
O2': (62.946,115.951,133.058)
C6: (60.561,112.048,128.899)
C5: (61.568,112.215,129.859)
C4: (61.254,112.959,130.980)
P: (57.664,114.745,135.292)
C4': (61.151,113.449,134.935)
C2': (61.989,114.942,133.311)
C2: (59.202,113.309,130.279)
N1: (59.361,112.615,129.144)
N3: (60.076,113.543,131.252)
N6: (60.732,111.368,127.763)
N7: (62.880,111.768,129.920)
N9: (62.388,112.956,131.760)
O5': (58.883,113.799,135.676)
O3': (62.851,115.016,135.532)
OP2: (57.284,115.520,136.494)
C3': (61.645,114.881,134.790)
C1': (62.575,113.544,133.086)
C5': (59.689,113.203,134.656)
O4': (61.950,112.678,134.010)
C8: (63.322,112.241,131.058)
O2': (62.946,115.951,133.058)
C6: (60.561,112.048,128.899)
C5: (61.568,112.215,129.859)
C4: (61.254,112.959,130.980)
P: (57.664,114.745,135.292)
C4': (61.151,113.449,134.935)
C2': (61.989,114.942,133.311)
C2: (59.202,113.309,130.279)
N1: (59.361,112.615,129.144)
N3: (60.076,113.543,131.252)
N6: (60.732,111.368,127.763)
N7: (62.880,111.768,129.920)
N9: (62.388,112.956,131.760)
O5': (58.883,113.799,135.676)
O3': (62.851,115.016,135.532)
Image (generated by PyMOL):