Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1190:A2394
Extra
PDB:
ATOM 1 O3' A A1189 52.011 108.262 135.659 1.00 37.90 O
ATOM 2 P A A1190 52.426 109.758 136.044 1.00 36.56 P
ATOM 3 OP1 A A1190 52.875 109.707 137.452 1.00 37.33 O
ATOM 4 OP2 A A1190 51.360 110.696 135.665 1.00 37.39 O
ATOM 5 O5' A A1190 53.708 110.037 135.138 1.00 37.11 O
ATOM 6 C5' A A1190 53.591 110.353 133.736 1.00 35.68 C
ATOM 7 C4' A A1190 54.653 111.344 133.331 1.00 35.48 C
ATOM 8 O4' A A1190 55.951 110.720 133.335 1.00 35.35 O
ATOM 9 C3' A A1190 54.595 111.839 131.901 1.00 36.80 C
ATOM 10 O3' A A1190 53.571 112.807 131.718 1.00 38.02 O
ATOM 11 C2' A A1190 55.971 112.470 131.747 1.00 35.71 C
ATOM 12 O2' A A1190 56.063 113.713 132.399 1.00 35.55 O
ATOM 13 C1' A A1190 56.828 111.498 132.542 1.00 35.51 C
ATOM 14 N9 A A1190 57.701 110.619 131.761 1.00 37.19 N
ATOM 15 C8 A A1190 57.506 109.983 130.556 1.00 37.61 C
ATOM 16 N7 A A1190 58.527 109.256 130.175 1.00 37.72 N
ATOM 17 C5 A A1190 59.452 109.425 131.194 1.00 38.50 C
ATOM 18 C6 A A1190 60.740 108.903 131.401 1.00 38.24 C
ATOM 19 N6 A A1190 61.348 108.054 130.572 1.00 37.26 N
ATOM 20 N1 A A1190 61.394 109.281 132.513 1.00 38.47 N
ATOM 21 C2 A A1190 60.786 110.114 133.359 1.00 37.53 C
ATOM 22 N3 A A1190 59.583 110.659 133.283 1.00 36.91 N
ATOM 23 C4 A A1190 58.961 110.269 132.165 1.00 37.76 C
ATOM 24 P A A1191 52.771 112.875 130.321 1.00 38.40 P
ATOM 25 OP1 A A1191 51.524 113.631 130.589 1.00 37.33 O
ATOM 26 OP2 A A1191 52.694 111.539 129.683 1.00 38.52 O
ATOM 27 O5' A A1191 53.697 113.769 129.393 1.00 36.85 O
TER
ATOM 1 O3' C B2393 58.358 115.949 134.729 1.00 39.53 O
ATOM 2 P A B2394 57.710 114.914 135.755 1.00 40.58 P
ATOM 3 OP1 A B2394 56.753 114.068 135.006 1.00 41.80 O
ATOM 4 OP2 A B2394 57.229 115.686 136.916 1.00 41.83 O
ATOM 5 O5' A B2394 58.961 114.030 136.180 1.00 40.66 O
ATOM 6 C5' A B2394 59.766 113.398 135.185 1.00 38.97 C
ATOM 7 C4' A B2394 61.229 113.637 135.437 1.00 40.11 C
ATOM 8 O4' A B2394 62.003 112.859 134.490 1.00 41.84 O
ATOM 9 C3' A B2394 61.710 115.066 135.282 1.00 41.34 C
ATOM 10 O3' A B2394 62.893 115.198 136.044 1.00 41.03 O
ATOM 11 C2' A B2394 62.080 115.121 133.806 1.00 42.65 C
ATOM 12 O2' A B2394 63.039 116.132 133.546 1.00 42.73 O
ATOM 13 C1' A B2394 62.665 113.720 133.588 1.00 43.02 C
ATOM 14 N9 A B2394 62.508 113.145 132.247 1.00 45.20 N
ATOM 15 C8 A B2394 63.464 112.469 131.538 1.00 47.17 C
ATOM 16 N7 A B2394 63.042 112.009 130.384 1.00 48.09 N
ATOM 17 C5 A B2394 61.718 112.414 130.328 1.00 46.99 C
ATOM 18 C6 A B2394 60.716 112.241 129.357 1.00 47.74 C
ATOM 19 N6 A B2394 60.904 111.564 128.220 1.00 48.11 N
ATOM 20 N1 A B2394 59.506 112.798 129.596 1.00 47.07 N
ATOM 21 C2 A B2394 59.335 113.478 130.734 1.00 45.70 C
ATOM 22 N3 A B2394 60.196 113.699 131.720 1.00 45.86 N
ATOM 23 C4 A B2394 61.381 113.133 131.457 1.00 45.71 C
ATOM 24 P U B2395 62.851 115.858 137.500 1.00 42.30 P
ATOM 25 OP1 U B2395 64.067 115.336 138.167 1.00 40.73 O
ATOM 26 OP2 U B2395 61.528 115.718 138.162 1.00 40.60 O
ATOM 27 O5' U B2395 63.053 117.396 137.189 1.00 39.74 O
TER
ATOM 2 P A A1190 52.426 109.758 136.044 1.00 36.56 P
ATOM 3 OP1 A A1190 52.875 109.707 137.452 1.00 37.33 O
ATOM 4 OP2 A A1190 51.360 110.696 135.665 1.00 37.39 O
ATOM 5 O5' A A1190 53.708 110.037 135.138 1.00 37.11 O
ATOM 6 C5' A A1190 53.591 110.353 133.736 1.00 35.68 C
ATOM 7 C4' A A1190 54.653 111.344 133.331 1.00 35.48 C
ATOM 8 O4' A A1190 55.951 110.720 133.335 1.00 35.35 O
ATOM 9 C3' A A1190 54.595 111.839 131.901 1.00 36.80 C
ATOM 10 O3' A A1190 53.571 112.807 131.718 1.00 38.02 O
ATOM 11 C2' A A1190 55.971 112.470 131.747 1.00 35.71 C
ATOM 12 O2' A A1190 56.063 113.713 132.399 1.00 35.55 O
ATOM 13 C1' A A1190 56.828 111.498 132.542 1.00 35.51 C
ATOM 14 N9 A A1190 57.701 110.619 131.761 1.00 37.19 N
ATOM 15 C8 A A1190 57.506 109.983 130.556 1.00 37.61 C
ATOM 16 N7 A A1190 58.527 109.256 130.175 1.00 37.72 N
ATOM 17 C5 A A1190 59.452 109.425 131.194 1.00 38.50 C
ATOM 18 C6 A A1190 60.740 108.903 131.401 1.00 38.24 C
ATOM 19 N6 A A1190 61.348 108.054 130.572 1.00 37.26 N
ATOM 20 N1 A A1190 61.394 109.281 132.513 1.00 38.47 N
ATOM 21 C2 A A1190 60.786 110.114 133.359 1.00 37.53 C
ATOM 22 N3 A A1190 59.583 110.659 133.283 1.00 36.91 N
ATOM 23 C4 A A1190 58.961 110.269 132.165 1.00 37.76 C
ATOM 24 P A A1191 52.771 112.875 130.321 1.00 38.40 P
ATOM 25 OP1 A A1191 51.524 113.631 130.589 1.00 37.33 O
ATOM 26 OP2 A A1191 52.694 111.539 129.683 1.00 38.52 O
ATOM 27 O5' A A1191 53.697 113.769 129.393 1.00 36.85 O
TER
ATOM 1 O3' C B2393 58.358 115.949 134.729 1.00 39.53 O
ATOM 2 P A B2394 57.710 114.914 135.755 1.00 40.58 P
ATOM 3 OP1 A B2394 56.753 114.068 135.006 1.00 41.80 O
ATOM 4 OP2 A B2394 57.229 115.686 136.916 1.00 41.83 O
ATOM 5 O5' A B2394 58.961 114.030 136.180 1.00 40.66 O
ATOM 6 C5' A B2394 59.766 113.398 135.185 1.00 38.97 C
ATOM 7 C4' A B2394 61.229 113.637 135.437 1.00 40.11 C
ATOM 8 O4' A B2394 62.003 112.859 134.490 1.00 41.84 O
ATOM 9 C3' A B2394 61.710 115.066 135.282 1.00 41.34 C
ATOM 10 O3' A B2394 62.893 115.198 136.044 1.00 41.03 O
ATOM 11 C2' A B2394 62.080 115.121 133.806 1.00 42.65 C
ATOM 12 O2' A B2394 63.039 116.132 133.546 1.00 42.73 O
ATOM 13 C1' A B2394 62.665 113.720 133.588 1.00 43.02 C
ATOM 14 N9 A B2394 62.508 113.145 132.247 1.00 45.20 N
ATOM 15 C8 A B2394 63.464 112.469 131.538 1.00 47.17 C
ATOM 16 N7 A B2394 63.042 112.009 130.384 1.00 48.09 N
ATOM 17 C5 A B2394 61.718 112.414 130.328 1.00 46.99 C
ATOM 18 C6 A B2394 60.716 112.241 129.357 1.00 47.74 C
ATOM 19 N6 A B2394 60.904 111.564 128.220 1.00 48.11 N
ATOM 20 N1 A B2394 59.506 112.798 129.596 1.00 47.07 N
ATOM 21 C2 A B2394 59.335 113.478 130.734 1.00 45.70 C
ATOM 22 N3 A B2394 60.196 113.699 131.720 1.00 45.86 N
ATOM 23 C4 A B2394 61.381 113.133 131.457 1.00 45.71 C
ATOM 24 P U B2395 62.851 115.858 137.500 1.00 42.30 P
ATOM 25 OP1 U B2395 64.067 115.336 138.167 1.00 40.73 O
ATOM 26 OP2 U B2395 61.528 115.718 138.162 1.00 40.60 O
ATOM 27 O5' U B2395 63.053 117.396 137.189 1.00 39.74 O
TER
Atoms:
OP1: (52.875,109.707,137.452)
OP2: (51.360,110.696,135.665)
C3': (54.595,111.839,131.901)
C1': (56.828,111.498,132.542)
C5': (53.591,110.353,133.736)
O4': (55.951,110.720,133.335)
C8: (57.506,109.983,130.556)
O2': (56.063,113.713,132.399)
C6: (60.740,108.903,131.401)
C5: (59.452,109.425,131.194)
C4: (58.961,110.269,132.165)
P: (52.426,109.758,136.044)
C4': (54.653,111.344,133.331)
C2': (55.971,112.470,131.747)
C2: (60.786,110.114,133.359)
N1: (61.394,109.281,132.513)
N3: (59.583,110.659,133.283)
N6: (61.348,108.054,130.572)
N7: (58.527,109.256,130.175)
N9: (57.701,110.619,131.761)
O5': (53.708,110.037,135.138)
O3': (53.571,112.807,131.718)
OP2: (51.360,110.696,135.665)
C3': (54.595,111.839,131.901)
C1': (56.828,111.498,132.542)
C5': (53.591,110.353,133.736)
O4': (55.951,110.720,133.335)
C8: (57.506,109.983,130.556)
O2': (56.063,113.713,132.399)
C6: (60.740,108.903,131.401)
C5: (59.452,109.425,131.194)
C4: (58.961,110.269,132.165)
P: (52.426,109.758,136.044)
C4': (54.653,111.344,133.331)
C2': (55.971,112.470,131.747)
C2: (60.786,110.114,133.359)
N1: (61.394,109.281,132.513)
N3: (59.583,110.659,133.283)
N6: (61.348,108.054,130.572)
N7: (58.527,109.256,130.175)
N9: (57.701,110.619,131.761)
O5': (53.708,110.037,135.138)
O3': (53.571,112.807,131.718)
OP1: (56.753,114.068,135.006)
OP2: (57.229,115.686,136.916)
C3': (61.710,115.066,135.282)
C1': (62.665,113.720,133.588)
C5': (59.766,113.398,135.185)
O4': (62.003,112.859,134.490)
C8: (63.464,112.469,131.538)
O2': (63.039,116.132,133.546)
C6: (60.716,112.241,129.357)
C5: (61.718,112.414,130.328)
C4: (61.381,113.133,131.457)
P: (57.710,114.914,135.755)
C4': (61.229,113.637,135.437)
C2': (62.080,115.121,133.806)
C2: (59.335,113.478,130.734)
N1: (59.506,112.798,129.596)
N3: (60.196,113.699,131.720)
N6: (60.904,111.564,128.220)
N7: (63.042,112.009,130.384)
N9: (62.508,113.145,132.247)
O5': (58.961,114.030,136.180)
O3': (62.893,115.198,136.044)
OP2: (57.229,115.686,136.916)
C3': (61.710,115.066,135.282)
C1': (62.665,113.720,133.588)
C5': (59.766,113.398,135.185)
O4': (62.003,112.859,134.490)
C8: (63.464,112.469,131.538)
O2': (63.039,116.132,133.546)
C6: (60.716,112.241,129.357)
C5: (61.718,112.414,130.328)
C4: (61.381,113.133,131.457)
P: (57.710,114.914,135.755)
C4': (61.229,113.637,135.437)
C2': (62.080,115.121,133.806)
C2: (59.335,113.478,130.734)
N1: (59.506,112.798,129.596)
N3: (60.196,113.699,131.720)
N6: (60.904,111.564,128.220)
N7: (63.042,112.009,130.384)
N9: (62.508,113.145,132.247)
O5': (58.961,114.030,136.180)
O3': (62.893,115.198,136.044)
Image (generated by PyMOL):