Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11246:12639
Extra
PDB:
ATOM 1 O3' A A1245 24.228 9.155 22.876 1.00 44.04 O
ATOM 2 P A A1246 23.804 10.497 23.669 1.00 44.44 P
ATOM 3 OP1 A A1246 22.856 11.233 22.807 1.00 44.88 O
ATOM 4 OP2 A A1246 25.071 11.179 24.084 1.00 44.26 O
ATOM 5 O5' A A1246 23.033 9.946 24.946 1.00 44.14 O
ATOM 6 C5' A A1246 23.700 9.737 26.169 1.00 43.71 C
ATOM 7 C4' A A1246 22.954 10.340 27.319 1.00 43.58 C
ATOM 8 O4' A A1246 21.679 9.688 27.504 1.00 43.62 O
ATOM 9 C3' A A1246 23.603 10.175 28.654 1.00 43.16 C
ATOM 10 O3' A A1246 24.714 11.043 28.821 1.00 43.08 O
ATOM 11 C2' A A1246 22.432 10.414 29.633 1.00 43.09 C
ATOM 12 O2' A A1246 22.195 11.794 29.838 1.00 43.24 O
ATOM 13 C1' A A1246 21.258 9.860 28.847 1.00 43.37 C
ATOM 14 N9 A A1246 20.781 8.576 29.362 1.00 43.17 N
ATOM 15 C8 A A1246 21.509 7.506 29.767 1.00 42.87 C
ATOM 16 N7 A A1246 20.808 6.466 30.133 1.00 42.78 N
ATOM 17 C5 A A1246 19.492 6.899 29.968 1.00 43.04 C
ATOM 18 C6 A A1246 18.245 6.255 30.166 1.00 43.10 C
ATOM 19 N6 A A1246 18.107 4.998 30.615 1.00 42.91 N
ATOM 20 N1 A A1246 17.150 6.960 29.881 1.00 43.40 N
ATOM 21 C2 A A1246 17.275 8.210 29.456 1.00 43.60 C
ATOM 22 N3 A A1246 18.331 8.936 29.216 1.00 43.58 N
ATOM 23 C4 A A1246 19.451 8.206 29.487 1.00 43.28 C
ATOM 24 P A A1247 26.109 10.511 29.423 1.00 49.15 P
ATOM 25 OP1 A A1247 27.153 10.884 28.468 1.00 49.31 O
ATOM 26 OP2 A A1247 25.946 9.080 29.794 1.00 48.93 O
ATOM 27 O5' A A1247 26.219 11.371 30.710 1.00 48.95 O
TER
ATOM 1 O3' U B2638 19.566 14.692 29.487 1.00 48.63 O
ATOM 2 P A B2639 19.619 14.293 27.940 1.00 53.26 P
ATOM 3 OP1 A B2639 20.948 13.755 27.712 1.00 53.06 O
ATOM 4 OP2 A B2639 19.129 15.504 27.135 1.00 53.70 O
ATOM 5 O5' A B2639 18.540 13.143 27.806 1.00 53.29 O
ATOM 6 C5' A B2639 18.067 12.472 28.951 1.00 52.99 C
ATOM 7 C4' A B2639 16.594 12.626 29.170 1.00 53.18 C
ATOM 8 O4' A B2639 16.167 11.414 29.801 1.00 52.94 O
ATOM 9 C3' A B2639 16.200 13.734 30.133 1.00 53.16 C
ATOM 10 O3' A B2639 14.804 14.022 30.011 1.00 53.45 O
ATOM 11 C2' A B2639 16.425 13.056 31.466 1.00 52.73 C
ATOM 12 O2' A B2639 15.720 13.640 32.535 1.00 52.67 O
ATOM 13 C1' A B2639 15.930 11.640 31.167 1.00 52.69 C
ATOM 14 N9 A B2639 16.628 10.581 31.904 1.00 52.28 N
ATOM 15 C8 A B2639 16.059 9.429 32.414 1.00 52.12 C
ATOM 16 N7 A B2639 16.899 8.604 33.007 1.00 51.78 N
ATOM 17 C5 A B2639 18.104 9.286 32.863 1.00 51.71 C
ATOM 18 C6 A B2639 19.372 8.973 33.271 1.00 51.41 C
ATOM 19 N6 A B2639 19.642 7.874 33.934 1.00 51.11 N
ATOM 20 N1 A B2639 20.359 9.822 32.989 1.00 51.43 N
ATOM 21 C2 A B2639 20.113 10.941 32.330 1.00 51.73 C
ATOM 22 N3 A B2639 18.961 11.353 31.887 1.00 52.04 N
ATOM 23 C4 A B2639 17.979 10.478 32.175 1.00 52.01 C
ATOM 24 P U B2640 14.252 15.171 29.010 1.00 45.35 P
ATOM 25 OP1 U B2640 12.843 14.827 28.686 1.00 45.62 O
ATOM 26 OP2 U B2640 15.227 15.295 27.879 1.00 45.49 O
ATOM 27 O5' U B2640 14.309 16.473 29.903 1.00 45.32 O
TER
ATOM 2 P A A1246 23.804 10.497 23.669 1.00 44.44 P
ATOM 3 OP1 A A1246 22.856 11.233 22.807 1.00 44.88 O
ATOM 4 OP2 A A1246 25.071 11.179 24.084 1.00 44.26 O
ATOM 5 O5' A A1246 23.033 9.946 24.946 1.00 44.14 O
ATOM 6 C5' A A1246 23.700 9.737 26.169 1.00 43.71 C
ATOM 7 C4' A A1246 22.954 10.340 27.319 1.00 43.58 C
ATOM 8 O4' A A1246 21.679 9.688 27.504 1.00 43.62 O
ATOM 9 C3' A A1246 23.603 10.175 28.654 1.00 43.16 C
ATOM 10 O3' A A1246 24.714 11.043 28.821 1.00 43.08 O
ATOM 11 C2' A A1246 22.432 10.414 29.633 1.00 43.09 C
ATOM 12 O2' A A1246 22.195 11.794 29.838 1.00 43.24 O
ATOM 13 C1' A A1246 21.258 9.860 28.847 1.00 43.37 C
ATOM 14 N9 A A1246 20.781 8.576 29.362 1.00 43.17 N
ATOM 15 C8 A A1246 21.509 7.506 29.767 1.00 42.87 C
ATOM 16 N7 A A1246 20.808 6.466 30.133 1.00 42.78 N
ATOM 17 C5 A A1246 19.492 6.899 29.968 1.00 43.04 C
ATOM 18 C6 A A1246 18.245 6.255 30.166 1.00 43.10 C
ATOM 19 N6 A A1246 18.107 4.998 30.615 1.00 42.91 N
ATOM 20 N1 A A1246 17.150 6.960 29.881 1.00 43.40 N
ATOM 21 C2 A A1246 17.275 8.210 29.456 1.00 43.60 C
ATOM 22 N3 A A1246 18.331 8.936 29.216 1.00 43.58 N
ATOM 23 C4 A A1246 19.451 8.206 29.487 1.00 43.28 C
ATOM 24 P A A1247 26.109 10.511 29.423 1.00 49.15 P
ATOM 25 OP1 A A1247 27.153 10.884 28.468 1.00 49.31 O
ATOM 26 OP2 A A1247 25.946 9.080 29.794 1.00 48.93 O
ATOM 27 O5' A A1247 26.219 11.371 30.710 1.00 48.95 O
TER
ATOM 1 O3' U B2638 19.566 14.692 29.487 1.00 48.63 O
ATOM 2 P A B2639 19.619 14.293 27.940 1.00 53.26 P
ATOM 3 OP1 A B2639 20.948 13.755 27.712 1.00 53.06 O
ATOM 4 OP2 A B2639 19.129 15.504 27.135 1.00 53.70 O
ATOM 5 O5' A B2639 18.540 13.143 27.806 1.00 53.29 O
ATOM 6 C5' A B2639 18.067 12.472 28.951 1.00 52.99 C
ATOM 7 C4' A B2639 16.594 12.626 29.170 1.00 53.18 C
ATOM 8 O4' A B2639 16.167 11.414 29.801 1.00 52.94 O
ATOM 9 C3' A B2639 16.200 13.734 30.133 1.00 53.16 C
ATOM 10 O3' A B2639 14.804 14.022 30.011 1.00 53.45 O
ATOM 11 C2' A B2639 16.425 13.056 31.466 1.00 52.73 C
ATOM 12 O2' A B2639 15.720 13.640 32.535 1.00 52.67 O
ATOM 13 C1' A B2639 15.930 11.640 31.167 1.00 52.69 C
ATOM 14 N9 A B2639 16.628 10.581 31.904 1.00 52.28 N
ATOM 15 C8 A B2639 16.059 9.429 32.414 1.00 52.12 C
ATOM 16 N7 A B2639 16.899 8.604 33.007 1.00 51.78 N
ATOM 17 C5 A B2639 18.104 9.286 32.863 1.00 51.71 C
ATOM 18 C6 A B2639 19.372 8.973 33.271 1.00 51.41 C
ATOM 19 N6 A B2639 19.642 7.874 33.934 1.00 51.11 N
ATOM 20 N1 A B2639 20.359 9.822 32.989 1.00 51.43 N
ATOM 21 C2 A B2639 20.113 10.941 32.330 1.00 51.73 C
ATOM 22 N3 A B2639 18.961 11.353 31.887 1.00 52.04 N
ATOM 23 C4 A B2639 17.979 10.478 32.175 1.00 52.01 C
ATOM 24 P U B2640 14.252 15.171 29.010 1.00 45.35 P
ATOM 25 OP1 U B2640 12.843 14.827 28.686 1.00 45.62 O
ATOM 26 OP2 U B2640 15.227 15.295 27.879 1.00 45.49 O
ATOM 27 O5' U B2640 14.309 16.473 29.903 1.00 45.32 O
TER
Atoms:
OP1: (22.856,11.233,22.807)
OP2: (25.071,11.179,24.084)
C3': (23.603,10.175,28.654)
C1': (21.258,9.860,28.847)
C5': (23.700,9.737,26.169)
O4': (21.679,9.688,27.504)
C8: (21.509,7.506,29.767)
O2': (22.195,11.794,29.838)
C6: (18.245,6.255,30.166)
C5: (19.492,6.899,29.968)
C4: (19.451,8.206,29.487)
P: (23.804,10.497,23.669)
C4': (22.954,10.340,27.319)
C2': (22.432,10.414,29.633)
C2: (17.275,8.210,29.456)
N1: (17.150,6.960,29.881)
N3: (18.331,8.936,29.216)
N6: (18.107,4.998,30.615)
N7: (20.808,6.466,30.133)
N9: (20.781,8.576,29.362)
O5': (23.033,9.946,24.946)
O3': (24.714,11.043,28.821)
OP2: (25.071,11.179,24.084)
C3': (23.603,10.175,28.654)
C1': (21.258,9.860,28.847)
C5': (23.700,9.737,26.169)
O4': (21.679,9.688,27.504)
C8: (21.509,7.506,29.767)
O2': (22.195,11.794,29.838)
C6: (18.245,6.255,30.166)
C5: (19.492,6.899,29.968)
C4: (19.451,8.206,29.487)
P: (23.804,10.497,23.669)
C4': (22.954,10.340,27.319)
C2': (22.432,10.414,29.633)
C2: (17.275,8.210,29.456)
N1: (17.150,6.960,29.881)
N3: (18.331,8.936,29.216)
N6: (18.107,4.998,30.615)
N7: (20.808,6.466,30.133)
N9: (20.781,8.576,29.362)
O5': (23.033,9.946,24.946)
O3': (24.714,11.043,28.821)
OP1: (20.948,13.755,27.712)
OP2: (19.129,15.504,27.135)
C3': (16.200,13.734,30.133)
C1': (15.930,11.640,31.167)
C5': (18.067,12.472,28.951)
O4': (16.167,11.414,29.801)
C8: (16.059,9.429,32.414)
O2': (15.720,13.640,32.535)
C6: (19.372,8.973,33.271)
C5: (18.104,9.286,32.863)
C4: (17.979,10.478,32.175)
P: (19.619,14.293,27.940)
C4': (16.594,12.626,29.170)
C2': (16.425,13.056,31.466)
C2: (20.113,10.941,32.330)
N1: (20.359,9.822,32.989)
N3: (18.961,11.353,31.887)
N6: (19.642,7.874,33.934)
N7: (16.899,8.604,33.007)
N9: (16.628,10.581,31.904)
O5': (18.540,13.143,27.806)
O3': (14.804,14.022,30.011)
OP2: (19.129,15.504,27.135)
C3': (16.200,13.734,30.133)
C1': (15.930,11.640,31.167)
C5': (18.067,12.472,28.951)
O4': (16.167,11.414,29.801)
C8: (16.059,9.429,32.414)
O2': (15.720,13.640,32.535)
C6: (19.372,8.973,33.271)
C5: (18.104,9.286,32.863)
C4: (17.979,10.478,32.175)
P: (19.619,14.293,27.940)
C4': (16.594,12.626,29.170)
C2': (16.425,13.056,31.466)
C2: (20.113,10.941,32.330)
N1: (20.359,9.822,32.989)
N3: (18.961,11.353,31.887)
N6: (19.642,7.874,33.934)
N7: (16.899,8.604,33.007)
N9: (16.628,10.581,31.904)
O5': (18.540,13.143,27.806)
O3': (14.804,14.022,30.011)
Image (generated by PyMOL):