Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A409:A226
Extra
PDB:
ATOM 1 O3' G A 408 -38.668 199.234 142.540 1.00 30.74 O
ATOM 2 P G A 409 -40.244 199.205 142.224 1.00 19.59 P
ATOM 3 OP1 G A 409 -40.709 197.829 142.510 1.00 19.59 O
ATOM 4 OP2 G A 409 -40.431 199.755 140.855 1.00 19.59 O
ATOM 5 O5' G A 409 -40.853 200.215 143.308 1.00 19.59 O
ATOM 6 C5' G A 409 -41.108 199.795 144.648 1.00 19.59 C
ATOM 7 C4' G A 409 -41.875 200.838 145.421 1.00 19.59 C
ATOM 8 O4' G A 409 -41.280 202.144 145.192 1.00 19.59 O
ATOM 9 C3' G A 409 -43.356 200.997 145.044 1.00 19.59 C
ATOM 10 O3' G A 409 -44.196 200.128 145.779 1.00 19.59 O
ATOM 11 C2' G A 409 -43.650 202.463 145.333 1.00 19.59 C
ATOM 12 O2' G A 409 -44.022 202.641 146.694 1.00 19.59 O
ATOM 13 C1' G A 409 -42.288 203.138 145.074 1.00 19.59 C
ATOM 14 N9 G A 409 -42.216 203.736 143.707 1.00 19.73 N
ATOM 15 C8 G A 409 -41.825 203.034 142.587 1.00 19.73 C
ATOM 16 N7 G A 409 -41.855 203.734 141.489 1.00 19.73 N
ATOM 17 C5 G A 409 -42.299 204.980 141.872 1.00 19.73 C
ATOM 18 C6 G A 409 -42.520 206.110 141.058 1.00 19.73 C
ATOM 19 O6 G A 409 -42.370 206.219 139.825 1.00 19.73 O
ATOM 20 N1 G A 409 -42.974 207.169 141.828 1.00 19.73 N
ATOM 21 C2 G A 409 -43.180 207.140 143.175 1.00 19.73 C
ATOM 22 N2 G A 409 -43.616 208.285 143.701 1.00 19.73 N
ATOM 23 N3 G A 409 -42.982 206.084 143.943 1.00 19.73 N
ATOM 24 C4 G A 409 -42.536 205.020 143.235 1.00 19.73 C
ATOM 25 P G A 410 -45.144 199.076 145.031 1.00 20.43 P
ATOM 26 OP1 G A 410 -45.703 199.753 143.860 1.00 20.43 O
ATOM 27 OP2 G A 410 -46.073 198.517 146.045 1.00 20.43 O
ATOM 28 O5' G A 410 -44.116 197.965 144.574 1.00 20.43 O
TER
ATOM 1 O3' A B 225 -45.357 205.356 154.836 1.00 22.06 O
ATOM 2 P A B 226 -46.740 204.733 154.363 1.00 26.66 P
ATOM 3 OP1 A B 226 -47.395 204.173 155.578 1.00 26.66 O
ATOM 4 OP2 A B 226 -46.434 203.825 153.211 1.00 26.66 O
ATOM 5 O5' A B 226 -47.547 206.010 153.846 1.00 26.66 O
ATOM 6 C5' A B 226 -47.305 207.313 154.383 1.00 26.66 C
ATOM 7 C4' A B 226 -47.311 208.371 153.305 1.00 26.66 C
ATOM 8 O4' A B 226 -46.166 208.156 152.421 1.00 26.66 O
ATOM 9 C3' A B 226 -48.548 208.359 152.392 1.00 26.66 C
ATOM 10 O3' A B 226 -48.760 209.669 151.860 1.00 26.66 O
ATOM 11 C2' A B 226 -48.073 207.465 151.267 1.00 26.66 C
ATOM 12 O2' A B 226 -48.820 207.569 150.080 1.00 26.66 O
ATOM 13 C1' A B 226 -46.647 207.995 151.104 1.00 26.66 C
ATOM 14 N9 A B 226 -45.743 207.120 150.362 1.00 26.51 N
ATOM 15 C8 A B 226 -45.185 205.903 150.662 1.00 26.51 C
ATOM 16 N7 A B 226 -44.422 205.424 149.707 1.00 26.51 N
ATOM 17 C5 A B 226 -44.485 206.396 148.723 1.00 26.51 C
ATOM 18 C6 A B 226 -43.899 206.509 147.450 1.00 26.51 C
ATOM 19 N6 A B 226 -43.086 205.594 146.907 1.00 26.51 N
ATOM 20 N1 A B 226 -44.186 207.622 146.741 1.00 26.51 N
ATOM 21 C2 A B 226 -44.989 208.547 147.271 1.00 26.51 C
ATOM 22 N3 A B 226 -45.596 208.549 148.445 1.00 26.51 N
ATOM 23 C4 A B 226 -45.295 207.437 149.120 1.00 26.51 C
ATOM 24 P C B 227 -50.016 210.576 152.293 1.00 45.76 P
ATOM 25 OP1 C B 227 -50.005 210.660 153.765 1.00 45.76 O
ATOM 26 OP2 C B 227 -51.217 210.030 151.620 1.00 45.76 O
ATOM 27 O5' C B 227 -49.626 212.000 151.670 1.00 45.76 O
TER
ATOM 2 P G A 409 -40.244 199.205 142.224 1.00 19.59 P
ATOM 3 OP1 G A 409 -40.709 197.829 142.510 1.00 19.59 O
ATOM 4 OP2 G A 409 -40.431 199.755 140.855 1.00 19.59 O
ATOM 5 O5' G A 409 -40.853 200.215 143.308 1.00 19.59 O
ATOM 6 C5' G A 409 -41.108 199.795 144.648 1.00 19.59 C
ATOM 7 C4' G A 409 -41.875 200.838 145.421 1.00 19.59 C
ATOM 8 O4' G A 409 -41.280 202.144 145.192 1.00 19.59 O
ATOM 9 C3' G A 409 -43.356 200.997 145.044 1.00 19.59 C
ATOM 10 O3' G A 409 -44.196 200.128 145.779 1.00 19.59 O
ATOM 11 C2' G A 409 -43.650 202.463 145.333 1.00 19.59 C
ATOM 12 O2' G A 409 -44.022 202.641 146.694 1.00 19.59 O
ATOM 13 C1' G A 409 -42.288 203.138 145.074 1.00 19.59 C
ATOM 14 N9 G A 409 -42.216 203.736 143.707 1.00 19.73 N
ATOM 15 C8 G A 409 -41.825 203.034 142.587 1.00 19.73 C
ATOM 16 N7 G A 409 -41.855 203.734 141.489 1.00 19.73 N
ATOM 17 C5 G A 409 -42.299 204.980 141.872 1.00 19.73 C
ATOM 18 C6 G A 409 -42.520 206.110 141.058 1.00 19.73 C
ATOM 19 O6 G A 409 -42.370 206.219 139.825 1.00 19.73 O
ATOM 20 N1 G A 409 -42.974 207.169 141.828 1.00 19.73 N
ATOM 21 C2 G A 409 -43.180 207.140 143.175 1.00 19.73 C
ATOM 22 N2 G A 409 -43.616 208.285 143.701 1.00 19.73 N
ATOM 23 N3 G A 409 -42.982 206.084 143.943 1.00 19.73 N
ATOM 24 C4 G A 409 -42.536 205.020 143.235 1.00 19.73 C
ATOM 25 P G A 410 -45.144 199.076 145.031 1.00 20.43 P
ATOM 26 OP1 G A 410 -45.703 199.753 143.860 1.00 20.43 O
ATOM 27 OP2 G A 410 -46.073 198.517 146.045 1.00 20.43 O
ATOM 28 O5' G A 410 -44.116 197.965 144.574 1.00 20.43 O
TER
ATOM 1 O3' A B 225 -45.357 205.356 154.836 1.00 22.06 O
ATOM 2 P A B 226 -46.740 204.733 154.363 1.00 26.66 P
ATOM 3 OP1 A B 226 -47.395 204.173 155.578 1.00 26.66 O
ATOM 4 OP2 A B 226 -46.434 203.825 153.211 1.00 26.66 O
ATOM 5 O5' A B 226 -47.547 206.010 153.846 1.00 26.66 O
ATOM 6 C5' A B 226 -47.305 207.313 154.383 1.00 26.66 C
ATOM 7 C4' A B 226 -47.311 208.371 153.305 1.00 26.66 C
ATOM 8 O4' A B 226 -46.166 208.156 152.421 1.00 26.66 O
ATOM 9 C3' A B 226 -48.548 208.359 152.392 1.00 26.66 C
ATOM 10 O3' A B 226 -48.760 209.669 151.860 1.00 26.66 O
ATOM 11 C2' A B 226 -48.073 207.465 151.267 1.00 26.66 C
ATOM 12 O2' A B 226 -48.820 207.569 150.080 1.00 26.66 O
ATOM 13 C1' A B 226 -46.647 207.995 151.104 1.00 26.66 C
ATOM 14 N9 A B 226 -45.743 207.120 150.362 1.00 26.51 N
ATOM 15 C8 A B 226 -45.185 205.903 150.662 1.00 26.51 C
ATOM 16 N7 A B 226 -44.422 205.424 149.707 1.00 26.51 N
ATOM 17 C5 A B 226 -44.485 206.396 148.723 1.00 26.51 C
ATOM 18 C6 A B 226 -43.899 206.509 147.450 1.00 26.51 C
ATOM 19 N6 A B 226 -43.086 205.594 146.907 1.00 26.51 N
ATOM 20 N1 A B 226 -44.186 207.622 146.741 1.00 26.51 N
ATOM 21 C2 A B 226 -44.989 208.547 147.271 1.00 26.51 C
ATOM 22 N3 A B 226 -45.596 208.549 148.445 1.00 26.51 N
ATOM 23 C4 A B 226 -45.295 207.437 149.120 1.00 26.51 C
ATOM 24 P C B 227 -50.016 210.576 152.293 1.00 45.76 P
ATOM 25 OP1 C B 227 -50.005 210.660 153.765 1.00 45.76 O
ATOM 26 OP2 C B 227 -51.217 210.030 151.620 1.00 45.76 O
ATOM 27 O5' C B 227 -49.626 212.000 151.670 1.00 45.76 O
TER
Atoms:
OP1: (-40.709,197.829,142.510)
OP2: (-40.431,199.755,140.855)
C3': (-43.356,200.997,145.044)
C1': (-42.288,203.138,145.074)
C5': (-41.108,199.795,144.648)
O6: (-42.370,206.219,139.825)
O4': (-41.280,202.144,145.192)
C8: (-41.825,203.034,142.587)
C2: (-43.180,207.140,143.175)
C6: (-42.520,206.110,141.058)
C5: (-42.299,204.980,141.872)
C4: (-42.536,205.020,143.235)
P: (-40.244,199.205,142.224)
C4': (-41.875,200.838,145.421)
C2': (-43.650,202.463,145.333)
O2': (-44.022,202.641,146.694)
N1: (-42.974,207.169,141.828)
N2: (-43.616,208.285,143.701)
N3: (-42.982,206.084,143.943)
N7: (-41.855,203.734,141.489)
N9: (-42.216,203.736,143.707)
O5': (-40.853,200.215,143.308)
O3': (-44.196,200.128,145.779)
OP2: (-40.431,199.755,140.855)
C3': (-43.356,200.997,145.044)
C1': (-42.288,203.138,145.074)
C5': (-41.108,199.795,144.648)
O6: (-42.370,206.219,139.825)
O4': (-41.280,202.144,145.192)
C8: (-41.825,203.034,142.587)
C2: (-43.180,207.140,143.175)
C6: (-42.520,206.110,141.058)
C5: (-42.299,204.980,141.872)
C4: (-42.536,205.020,143.235)
P: (-40.244,199.205,142.224)
C4': (-41.875,200.838,145.421)
C2': (-43.650,202.463,145.333)
O2': (-44.022,202.641,146.694)
N1: (-42.974,207.169,141.828)
N2: (-43.616,208.285,143.701)
N3: (-42.982,206.084,143.943)
N7: (-41.855,203.734,141.489)
N9: (-42.216,203.736,143.707)
O5': (-40.853,200.215,143.308)
O3': (-44.196,200.128,145.779)
OP1: (-47.395,204.173,155.578)
OP2: (-46.434,203.825,153.211)
C3': (-48.548,208.359,152.392)
C1': (-46.647,207.995,151.104)
C5': (-47.305,207.313,154.383)
O4': (-46.166,208.156,152.421)
C8: (-45.185,205.903,150.662)
O2': (-48.820,207.569,150.080)
C6: (-43.899,206.509,147.450)
C5: (-44.485,206.396,148.723)
C4: (-45.295,207.437,149.120)
P: (-46.740,204.733,154.363)
C4': (-47.311,208.371,153.305)
C2': (-48.073,207.465,151.267)
C2: (-44.989,208.547,147.271)
N1: (-44.186,207.622,146.741)
N3: (-45.596,208.549,148.445)
N6: (-43.086,205.594,146.907)
N7: (-44.422,205.424,149.707)
N9: (-45.743,207.120,150.362)
O5': (-47.547,206.010,153.846)
O3': (-48.760,209.669,151.860)
OP2: (-46.434,203.825,153.211)
C3': (-48.548,208.359,152.392)
C1': (-46.647,207.995,151.104)
C5': (-47.305,207.313,154.383)
O4': (-46.166,208.156,152.421)
C8: (-45.185,205.903,150.662)
O2': (-48.820,207.569,150.080)
C6: (-43.899,206.509,147.450)
C5: (-44.485,206.396,148.723)
C4: (-45.295,207.437,149.120)
P: (-46.740,204.733,154.363)
C4': (-47.311,208.371,153.305)
C2': (-48.073,207.465,151.267)
C2: (-44.989,208.547,147.271)
N1: (-44.186,207.622,146.741)
N3: (-45.596,208.549,148.445)
N6: (-43.086,205.594,146.907)
N7: (-44.422,205.424,149.707)
N9: (-45.743,207.120,150.362)
O5': (-47.547,206.010,153.846)
O3': (-48.760,209.669,151.860)
Image (generated by PyMOL):