Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0302:0325
Extra
PDB:
ATOM 1 O3' U A 301 1.057 145.228 52.776 1.00 60.06 O
ATOM 2 P G A 302 1.468 146.775 52.837 1.00 58.75 P
ATOM 3 OP1 G A 302 1.407 147.233 54.240 1.00 58.79 O
ATOM 4 OP2 G A 302 0.688 147.491 51.801 1.00 59.07 O
ATOM 5 O5' G A 302 2.997 146.768 52.400 1.00 59.37 O
ATOM 6 C5' G A 302 3.975 146.065 53.184 1.00 58.97 C
ATOM 7 C4' G A 302 5.315 146.041 52.484 1.00 58.15 C
ATOM 8 O4' G A 302 5.242 145.234 51.279 1.00 59.79 O
ATOM 9 C3' G A 302 5.847 147.370 51.987 1.00 56.98 C
ATOM 10 O3' G A 302 6.435 148.134 53.021 1.00 55.65 O
ATOM 11 C2' G A 302 6.875 146.917 50.967 1.00 58.69 C
ATOM 12 O2' G A 302 8.047 146.421 51.576 1.00 59.56 O
ATOM 13 C1' G A 302 6.130 145.760 50.304 1.00 59.35 C
ATOM 14 N9 G A 302 5.342 146.244 49.176 1.00 60.19 N
ATOM 15 C8 G A 302 4.053 146.713 49.207 1.00 61.11 C
ATOM 16 N7 G A 302 3.625 147.113 48.044 1.00 62.03 N
ATOM 17 C5 G A 302 4.692 146.888 47.191 1.00 61.96 C
ATOM 18 C6 G A 302 4.814 147.123 45.809 1.00 63.49 C
ATOM 19 O6 G A 302 3.974 147.596 45.035 1.00 66.63 O
ATOM 20 N1 G A 302 6.068 146.745 45.335 1.00 64.06 N
ATOM 21 C2 G A 302 7.073 146.206 46.099 1.00 62.94 C
ATOM 22 N2 G A 302 8.209 145.896 45.456 1.00 62.13 N
ATOM 23 N3 G A 302 6.968 145.984 47.397 1.00 62.31 N
ATOM 24 C4 G A 302 5.758 146.345 47.873 1.00 61.22 C
ATOM 25 P G A 303 6.271 149.727 53.012 1.00 54.94 P
ATOM 26 OP1 G A 303 6.975 150.285 54.189 1.00 55.24 O
ATOM 27 OP2 G A 303 4.837 150.008 52.824 1.00 57.95 O
ATOM 28 O5' G A 303 7.032 150.191 51.695 1.00 54.68 O
TER
ATOM 1 O3' G B 324 16.425 145.479 46.809 1.00 47.65 O
ATOM 2 P A B 325 17.129 144.126 47.317 1.00 48.08 P
ATOM 3 OP1 A B 325 17.511 144.363 48.723 1.00 49.51 O
ATOM 4 OP2 A B 325 18.162 143.694 46.341 1.00 47.09 O
ATOM 5 O5' A B 325 15.954 143.055 47.328 1.00 49.39 O
ATOM 6 C5' A B 325 15.807 142.073 46.283 1.00 49.53 C
ATOM 7 C4' A B 325 15.514 140.728 46.896 1.00 50.68 C
ATOM 8 O4' A B 325 14.532 140.892 47.953 1.00 50.93 O
ATOM 9 C3' A B 325 14.970 139.646 45.973 1.00 52.09 C
ATOM 10 O3' A B 325 15.427 138.395 46.472 1.00 54.02 O
ATOM 11 C2' A B 325 13.461 139.757 46.199 1.00 52.62 C
ATOM 12 O2' A B 325 12.754 138.557 45.939 1.00 53.17 O
ATOM 13 C1' A B 325 13.409 140.076 47.692 1.00 50.77 C
ATOM 14 N9 A B 325 12.214 140.799 48.125 1.00 49.48 N
ATOM 15 C8 A B 325 11.348 140.438 49.126 1.00 49.69 C
ATOM 16 N7 A B 325 10.371 141.289 49.314 1.00 48.36 N
ATOM 17 C5 A B 325 10.603 142.276 48.369 1.00 48.45 C
ATOM 18 C6 A B 325 9.918 143.455 48.053 1.00 47.94 C
ATOM 19 N6 A B 325 8.813 143.860 48.681 1.00 48.30 N
ATOM 20 N1 A B 325 10.412 144.217 47.057 1.00 48.27 N
ATOM 21 C2 A B 325 11.520 143.809 46.427 1.00 47.39 C
ATOM 22 N3 A B 325 12.250 142.721 46.629 1.00 46.77 N
ATOM 23 C4 A B 325 11.733 141.987 47.626 1.00 48.61 C
ATOM 24 P C B 326 16.574 137.589 45.695 1.00 54.87 P
ATOM 25 OP1 C B 326 17.420 136.946 46.730 1.00 55.45 O
ATOM 26 OP2 C B 326 17.205 138.475 44.682 1.00 57.03 O
ATOM 27 O5' C B 326 15.778 136.448 44.923 1.00 55.24 O
TER
ATOM 2 P G A 302 1.468 146.775 52.837 1.00 58.75 P
ATOM 3 OP1 G A 302 1.407 147.233 54.240 1.00 58.79 O
ATOM 4 OP2 G A 302 0.688 147.491 51.801 1.00 59.07 O
ATOM 5 O5' G A 302 2.997 146.768 52.400 1.00 59.37 O
ATOM 6 C5' G A 302 3.975 146.065 53.184 1.00 58.97 C
ATOM 7 C4' G A 302 5.315 146.041 52.484 1.00 58.15 C
ATOM 8 O4' G A 302 5.242 145.234 51.279 1.00 59.79 O
ATOM 9 C3' G A 302 5.847 147.370 51.987 1.00 56.98 C
ATOM 10 O3' G A 302 6.435 148.134 53.021 1.00 55.65 O
ATOM 11 C2' G A 302 6.875 146.917 50.967 1.00 58.69 C
ATOM 12 O2' G A 302 8.047 146.421 51.576 1.00 59.56 O
ATOM 13 C1' G A 302 6.130 145.760 50.304 1.00 59.35 C
ATOM 14 N9 G A 302 5.342 146.244 49.176 1.00 60.19 N
ATOM 15 C8 G A 302 4.053 146.713 49.207 1.00 61.11 C
ATOM 16 N7 G A 302 3.625 147.113 48.044 1.00 62.03 N
ATOM 17 C5 G A 302 4.692 146.888 47.191 1.00 61.96 C
ATOM 18 C6 G A 302 4.814 147.123 45.809 1.00 63.49 C
ATOM 19 O6 G A 302 3.974 147.596 45.035 1.00 66.63 O
ATOM 20 N1 G A 302 6.068 146.745 45.335 1.00 64.06 N
ATOM 21 C2 G A 302 7.073 146.206 46.099 1.00 62.94 C
ATOM 22 N2 G A 302 8.209 145.896 45.456 1.00 62.13 N
ATOM 23 N3 G A 302 6.968 145.984 47.397 1.00 62.31 N
ATOM 24 C4 G A 302 5.758 146.345 47.873 1.00 61.22 C
ATOM 25 P G A 303 6.271 149.727 53.012 1.00 54.94 P
ATOM 26 OP1 G A 303 6.975 150.285 54.189 1.00 55.24 O
ATOM 27 OP2 G A 303 4.837 150.008 52.824 1.00 57.95 O
ATOM 28 O5' G A 303 7.032 150.191 51.695 1.00 54.68 O
TER
ATOM 1 O3' G B 324 16.425 145.479 46.809 1.00 47.65 O
ATOM 2 P A B 325 17.129 144.126 47.317 1.00 48.08 P
ATOM 3 OP1 A B 325 17.511 144.363 48.723 1.00 49.51 O
ATOM 4 OP2 A B 325 18.162 143.694 46.341 1.00 47.09 O
ATOM 5 O5' A B 325 15.954 143.055 47.328 1.00 49.39 O
ATOM 6 C5' A B 325 15.807 142.073 46.283 1.00 49.53 C
ATOM 7 C4' A B 325 15.514 140.728 46.896 1.00 50.68 C
ATOM 8 O4' A B 325 14.532 140.892 47.953 1.00 50.93 O
ATOM 9 C3' A B 325 14.970 139.646 45.973 1.00 52.09 C
ATOM 10 O3' A B 325 15.427 138.395 46.472 1.00 54.02 O
ATOM 11 C2' A B 325 13.461 139.757 46.199 1.00 52.62 C
ATOM 12 O2' A B 325 12.754 138.557 45.939 1.00 53.17 O
ATOM 13 C1' A B 325 13.409 140.076 47.692 1.00 50.77 C
ATOM 14 N9 A B 325 12.214 140.799 48.125 1.00 49.48 N
ATOM 15 C8 A B 325 11.348 140.438 49.126 1.00 49.69 C
ATOM 16 N7 A B 325 10.371 141.289 49.314 1.00 48.36 N
ATOM 17 C5 A B 325 10.603 142.276 48.369 1.00 48.45 C
ATOM 18 C6 A B 325 9.918 143.455 48.053 1.00 47.94 C
ATOM 19 N6 A B 325 8.813 143.860 48.681 1.00 48.30 N
ATOM 20 N1 A B 325 10.412 144.217 47.057 1.00 48.27 N
ATOM 21 C2 A B 325 11.520 143.809 46.427 1.00 47.39 C
ATOM 22 N3 A B 325 12.250 142.721 46.629 1.00 46.77 N
ATOM 23 C4 A B 325 11.733 141.987 47.626 1.00 48.61 C
ATOM 24 P C B 326 16.574 137.589 45.695 1.00 54.87 P
ATOM 25 OP1 C B 326 17.420 136.946 46.730 1.00 55.45 O
ATOM 26 OP2 C B 326 17.205 138.475 44.682 1.00 57.03 O
ATOM 27 O5' C B 326 15.778 136.448 44.923 1.00 55.24 O
TER
Atoms:
OP1: (1.407,147.233,54.240)
OP2: (0.688,147.491,51.801)
C3': (5.847,147.370,51.987)
C1': (6.130,145.760,50.304)
C5': (3.975,146.065,53.184)
O6: (3.974,147.596,45.035)
O4': (5.242,145.234,51.279)
C8: (4.053,146.713,49.207)
C2: (7.073,146.206,46.099)
C6: (4.814,147.123,45.809)
C5: (4.692,146.888,47.191)
C4: (5.758,146.345,47.873)
P: (1.468,146.775,52.837)
C4': (5.315,146.041,52.484)
C2': (6.875,146.917,50.967)
O2': (8.047,146.421,51.576)
N1: (6.068,146.745,45.335)
N2: (8.209,145.896,45.456)
N3: (6.968,145.984,47.397)
N7: (3.625,147.113,48.044)
N9: (5.342,146.244,49.176)
O5': (2.997,146.768,52.400)
O3': (6.435,148.134,53.021)
OP2: (0.688,147.491,51.801)
C3': (5.847,147.370,51.987)
C1': (6.130,145.760,50.304)
C5': (3.975,146.065,53.184)
O6: (3.974,147.596,45.035)
O4': (5.242,145.234,51.279)
C8: (4.053,146.713,49.207)
C2: (7.073,146.206,46.099)
C6: (4.814,147.123,45.809)
C5: (4.692,146.888,47.191)
C4: (5.758,146.345,47.873)
P: (1.468,146.775,52.837)
C4': (5.315,146.041,52.484)
C2': (6.875,146.917,50.967)
O2': (8.047,146.421,51.576)
N1: (6.068,146.745,45.335)
N2: (8.209,145.896,45.456)
N3: (6.968,145.984,47.397)
N7: (3.625,147.113,48.044)
N9: (5.342,146.244,49.176)
O5': (2.997,146.768,52.400)
O3': (6.435,148.134,53.021)
OP1: (17.511,144.363,48.723)
OP2: (18.162,143.694,46.341)
C3': (14.970,139.646,45.973)
C1': (13.409,140.076,47.692)
C5': (15.807,142.073,46.283)
O4': (14.532,140.892,47.953)
C8: (11.348,140.438,49.126)
O2': (12.754,138.557,45.939)
C6: (9.918,143.455,48.053)
C5: (10.603,142.276,48.369)
C4: (11.733,141.987,47.626)
P: (17.129,144.126,47.317)
C4': (15.514,140.728,46.896)
C2': (13.461,139.757,46.199)
C2: (11.520,143.809,46.427)
N1: (10.412,144.217,47.057)
N3: (12.250,142.721,46.629)
N6: (8.813,143.860,48.681)
N7: (10.371,141.289,49.314)
N9: (12.214,140.799,48.125)
O5': (15.954,143.055,47.328)
O3': (15.427,138.395,46.472)
OP2: (18.162,143.694,46.341)
C3': (14.970,139.646,45.973)
C1': (13.409,140.076,47.692)
C5': (15.807,142.073,46.283)
O4': (14.532,140.892,47.953)
C8: (11.348,140.438,49.126)
O2': (12.754,138.557,45.939)
C6: (9.918,143.455,48.053)
C5: (10.603,142.276,48.369)
C4: (11.733,141.987,47.626)
P: (17.129,144.126,47.317)
C4': (15.514,140.728,46.896)
C2': (13.461,139.757,46.199)
C2: (11.520,143.809,46.427)
N1: (10.412,144.217,47.057)
N3: (12.250,142.721,46.629)
N6: (8.813,143.860,48.681)
N7: (10.371,141.289,49.314)
N9: (12.214,140.799,48.125)
O5': (15.954,143.055,47.328)
O3': (15.427,138.395,46.472)
Image (generated by PyMOL):