Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D23:D51
Extra
PDB:
ATOM 1 O3' A A 22 7.072 3.541 -61.014 1.00 47.30 O
ATOM 2 P G A 23 7.988 3.211 -62.293 1.00 43.02 P
ATOM 3 OP1 G A 23 9.182 4.087 -62.214 1.00 57.79 O
ATOM 4 OP2 G A 23 7.116 3.303 -63.488 1.00 44.20 O
ATOM 5 O5' G A 23 8.411 1.695 -62.048 1.00 48.58 O
ATOM 6 C5' G A 23 9.362 1.352 -61.051 1.00 48.29 C
ATOM 7 C4' G A 23 9.639 -0.130 -61.042 1.00 43.70 C
ATOM 8 O4' G A 23 8.425 -0.854 -60.713 1.00 43.09 O
ATOM 9 C3' G A 23 10.078 -0.728 -62.369 1.00 44.97 C
ATOM 10 O3' G A 23 11.457 -0.536 -62.633 1.00 47.31 O
ATOM 11 C2' G A 23 9.676 -2.191 -62.224 1.00 41.41 C
ATOM 12 O2' G A 23 10.613 -2.892 -61.422 1.00 38.15 O
ATOM 13 C1' G A 23 8.372 -2.066 -61.438 1.00 38.54 C
ATOM 14 N9 G A 23 7.190 -2.035 -62.321 1.00 37.52 N
ATOM 15 C8 G A 23 6.716 -0.966 -63.041 1.00 40.03 C
ATOM 16 N7 G A 23 5.642 -1.243 -63.728 1.00 39.89 N
ATOM 17 C5 G A 23 5.386 -2.576 -63.444 1.00 37.86 C
ATOM 18 C6 G A 23 4.349 -3.429 -63.899 1.00 38.52 C
ATOM 19 O6 G A 23 3.419 -3.169 -64.672 1.00 41.68 O
ATOM 20 N1 G A 23 4.467 -4.706 -63.362 1.00 38.14 N
ATOM 21 C2 G A 23 5.452 -5.115 -62.499 1.00 40.84 C
ATOM 22 N2 G A 23 5.394 -6.391 -62.090 1.00 39.98 N
ATOM 23 N3 G A 23 6.421 -4.325 -62.067 1.00 42.54 N
ATOM 24 C4 G A 23 6.330 -3.078 -62.575 1.00 38.13 C
ATOM 25 P C A 24 11.939 -0.036 -64.083 1.00 52.06 P
ATOM 26 OP1 C A 24 10.729 0.410 -64.814 1.00 49.02 O
ATOM 27 OP2 C A 24 12.765 -1.122 -64.667 1.00 53.57 O
ATOM 28 O5' C A 24 12.859 1.218 -63.739 1.00 47.03 O
TER
ATOM 1 O3' A B 50 12.600 -9.881 -53.076 1.00 47.09 O
ATOM 2 P A B 51 14.197 -10.023 -53.082 1.00 39.44 P
ATOM 3 OP1 A B 51 14.519 -11.344 -52.495 1.00 44.66 O
ATOM 4 OP2 A B 51 14.747 -8.804 -52.439 1.00 48.91 O
ATOM 5 O5' A B 51 14.544 -10.020 -54.636 1.00 41.44 O
ATOM 6 C5' A B 51 13.844 -9.176 -55.539 1.00 40.34 C
ATOM 7 C4' A B 51 13.172 -9.971 -56.630 1.00 41.32 C
ATOM 8 O4' A B 51 11.733 -9.981 -56.423 1.00 43.69 O
ATOM 9 C3' A B 51 13.320 -9.428 -58.041 1.00 40.21 C
ATOM 10 O3' A B 51 14.574 -9.713 -58.627 1.00 41.45 O
ATOM 11 C2' A B 51 12.145 -10.074 -58.756 1.00 42.05 C
ATOM 12 O2' A B 51 12.405 -11.447 -59.012 1.00 45.10 O
ATOM 13 C1' A B 51 11.072 -9.980 -57.675 1.00 39.60 C
ATOM 14 N9 A B 51 10.296 -8.733 -57.797 1.00 34.52 N
ATOM 15 C8 A B 51 10.475 -7.547 -57.131 1.00 35.53 C
ATOM 16 N7 A B 51 9.621 -6.616 -57.481 1.00 38.35 N
ATOM 17 C5 A B 51 8.833 -7.229 -58.447 1.00 37.46 C
ATOM 18 C6 A B 51 7.743 -6.776 -59.214 1.00 33.27 C
ATOM 19 N6 A B 51 7.234 -5.545 -59.128 1.00 33.38 N
ATOM 20 N1 A B 51 7.185 -7.642 -60.087 1.00 31.62 N
ATOM 21 C2 A B 51 7.694 -8.877 -60.177 1.00 32.17 C
ATOM 22 N3 A B 51 8.711 -9.421 -59.514 1.00 34.62 N
ATOM 23 C4 A B 51 9.242 -8.534 -58.654 1.00 37.40 C
ATOM 24 P U B 52 15.138 -8.771 -59.798 1.00 42.42 P
ATOM 25 OP1 U B 52 15.821 -9.651 -60.777 1.00 48.85 O
ATOM 26 OP2 U B 52 15.914 -7.686 -59.150 1.00 41.97 O
ATOM 27 O5' U B 52 13.807 -8.176 -60.439 1.00 34.64 O
TER
ATOM 2 P G A 23 7.988 3.211 -62.293 1.00 43.02 P
ATOM 3 OP1 G A 23 9.182 4.087 -62.214 1.00 57.79 O
ATOM 4 OP2 G A 23 7.116 3.303 -63.488 1.00 44.20 O
ATOM 5 O5' G A 23 8.411 1.695 -62.048 1.00 48.58 O
ATOM 6 C5' G A 23 9.362 1.352 -61.051 1.00 48.29 C
ATOM 7 C4' G A 23 9.639 -0.130 -61.042 1.00 43.70 C
ATOM 8 O4' G A 23 8.425 -0.854 -60.713 1.00 43.09 O
ATOM 9 C3' G A 23 10.078 -0.728 -62.369 1.00 44.97 C
ATOM 10 O3' G A 23 11.457 -0.536 -62.633 1.00 47.31 O
ATOM 11 C2' G A 23 9.676 -2.191 -62.224 1.00 41.41 C
ATOM 12 O2' G A 23 10.613 -2.892 -61.422 1.00 38.15 O
ATOM 13 C1' G A 23 8.372 -2.066 -61.438 1.00 38.54 C
ATOM 14 N9 G A 23 7.190 -2.035 -62.321 1.00 37.52 N
ATOM 15 C8 G A 23 6.716 -0.966 -63.041 1.00 40.03 C
ATOM 16 N7 G A 23 5.642 -1.243 -63.728 1.00 39.89 N
ATOM 17 C5 G A 23 5.386 -2.576 -63.444 1.00 37.86 C
ATOM 18 C6 G A 23 4.349 -3.429 -63.899 1.00 38.52 C
ATOM 19 O6 G A 23 3.419 -3.169 -64.672 1.00 41.68 O
ATOM 20 N1 G A 23 4.467 -4.706 -63.362 1.00 38.14 N
ATOM 21 C2 G A 23 5.452 -5.115 -62.499 1.00 40.84 C
ATOM 22 N2 G A 23 5.394 -6.391 -62.090 1.00 39.98 N
ATOM 23 N3 G A 23 6.421 -4.325 -62.067 1.00 42.54 N
ATOM 24 C4 G A 23 6.330 -3.078 -62.575 1.00 38.13 C
ATOM 25 P C A 24 11.939 -0.036 -64.083 1.00 52.06 P
ATOM 26 OP1 C A 24 10.729 0.410 -64.814 1.00 49.02 O
ATOM 27 OP2 C A 24 12.765 -1.122 -64.667 1.00 53.57 O
ATOM 28 O5' C A 24 12.859 1.218 -63.739 1.00 47.03 O
TER
ATOM 1 O3' A B 50 12.600 -9.881 -53.076 1.00 47.09 O
ATOM 2 P A B 51 14.197 -10.023 -53.082 1.00 39.44 P
ATOM 3 OP1 A B 51 14.519 -11.344 -52.495 1.00 44.66 O
ATOM 4 OP2 A B 51 14.747 -8.804 -52.439 1.00 48.91 O
ATOM 5 O5' A B 51 14.544 -10.020 -54.636 1.00 41.44 O
ATOM 6 C5' A B 51 13.844 -9.176 -55.539 1.00 40.34 C
ATOM 7 C4' A B 51 13.172 -9.971 -56.630 1.00 41.32 C
ATOM 8 O4' A B 51 11.733 -9.981 -56.423 1.00 43.69 O
ATOM 9 C3' A B 51 13.320 -9.428 -58.041 1.00 40.21 C
ATOM 10 O3' A B 51 14.574 -9.713 -58.627 1.00 41.45 O
ATOM 11 C2' A B 51 12.145 -10.074 -58.756 1.00 42.05 C
ATOM 12 O2' A B 51 12.405 -11.447 -59.012 1.00 45.10 O
ATOM 13 C1' A B 51 11.072 -9.980 -57.675 1.00 39.60 C
ATOM 14 N9 A B 51 10.296 -8.733 -57.797 1.00 34.52 N
ATOM 15 C8 A B 51 10.475 -7.547 -57.131 1.00 35.53 C
ATOM 16 N7 A B 51 9.621 -6.616 -57.481 1.00 38.35 N
ATOM 17 C5 A B 51 8.833 -7.229 -58.447 1.00 37.46 C
ATOM 18 C6 A B 51 7.743 -6.776 -59.214 1.00 33.27 C
ATOM 19 N6 A B 51 7.234 -5.545 -59.128 1.00 33.38 N
ATOM 20 N1 A B 51 7.185 -7.642 -60.087 1.00 31.62 N
ATOM 21 C2 A B 51 7.694 -8.877 -60.177 1.00 32.17 C
ATOM 22 N3 A B 51 8.711 -9.421 -59.514 1.00 34.62 N
ATOM 23 C4 A B 51 9.242 -8.534 -58.654 1.00 37.40 C
ATOM 24 P U B 52 15.138 -8.771 -59.798 1.00 42.42 P
ATOM 25 OP1 U B 52 15.821 -9.651 -60.777 1.00 48.85 O
ATOM 26 OP2 U B 52 15.914 -7.686 -59.150 1.00 41.97 O
ATOM 27 O5' U B 52 13.807 -8.176 -60.439 1.00 34.64 O
TER
Atoms:
OP1: (9.182,4.087,-62.214)
OP2: (7.116,3.303,-63.488)
C3': (10.078,-0.728,-62.369)
C1': (8.372,-2.066,-61.438)
C5': (9.362,1.352,-61.051)
O6: (3.419,-3.169,-64.672)
O4': (8.425,-0.854,-60.713)
C8: (6.716,-0.966,-63.041)
C2: (5.452,-5.115,-62.499)
C6: (4.349,-3.429,-63.899)
C5: (5.386,-2.576,-63.444)
C4: (6.330,-3.078,-62.575)
P: (7.988,3.211,-62.293)
C4': (9.639,-0.130,-61.042)
C2': (9.676,-2.191,-62.224)
O2': (10.613,-2.892,-61.422)
N1: (4.467,-4.706,-63.362)
N2: (5.394,-6.391,-62.090)
N3: (6.421,-4.325,-62.067)
N7: (5.642,-1.243,-63.728)
N9: (7.190,-2.035,-62.321)
O5': (8.411,1.695,-62.048)
O3': (11.457,-0.536,-62.633)
OP2: (7.116,3.303,-63.488)
C3': (10.078,-0.728,-62.369)
C1': (8.372,-2.066,-61.438)
C5': (9.362,1.352,-61.051)
O6: (3.419,-3.169,-64.672)
O4': (8.425,-0.854,-60.713)
C8: (6.716,-0.966,-63.041)
C2: (5.452,-5.115,-62.499)
C6: (4.349,-3.429,-63.899)
C5: (5.386,-2.576,-63.444)
C4: (6.330,-3.078,-62.575)
P: (7.988,3.211,-62.293)
C4': (9.639,-0.130,-61.042)
C2': (9.676,-2.191,-62.224)
O2': (10.613,-2.892,-61.422)
N1: (4.467,-4.706,-63.362)
N2: (5.394,-6.391,-62.090)
N3: (6.421,-4.325,-62.067)
N7: (5.642,-1.243,-63.728)
N9: (7.190,-2.035,-62.321)
O5': (8.411,1.695,-62.048)
O3': (11.457,-0.536,-62.633)
OP1: (14.519,-11.344,-52.495)
OP2: (14.747,-8.804,-52.439)
C3': (13.320,-9.428,-58.041)
C1': (11.072,-9.980,-57.675)
C5': (13.844,-9.176,-55.539)
O4': (11.733,-9.981,-56.423)
C8: (10.475,-7.547,-57.131)
O2': (12.405,-11.447,-59.012)
C6: (7.743,-6.776,-59.214)
C5: (8.833,-7.229,-58.447)
C4: (9.242,-8.534,-58.654)
P: (14.197,-10.023,-53.082)
C4': (13.172,-9.971,-56.630)
C2': (12.145,-10.074,-58.756)
C2: (7.694,-8.877,-60.177)
N1: (7.185,-7.642,-60.087)
N3: (8.711,-9.421,-59.514)
N6: (7.234,-5.545,-59.128)
N7: (9.621,-6.616,-57.481)
N9: (10.296,-8.733,-57.797)
O5': (14.544,-10.020,-54.636)
O3': (14.574,-9.713,-58.627)
OP2: (14.747,-8.804,-52.439)
C3': (13.320,-9.428,-58.041)
C1': (11.072,-9.980,-57.675)
C5': (13.844,-9.176,-55.539)
O4': (11.733,-9.981,-56.423)
C8: (10.475,-7.547,-57.131)
O2': (12.405,-11.447,-59.012)
C6: (7.743,-6.776,-59.214)
C5: (8.833,-7.229,-58.447)
C4: (9.242,-8.534,-58.654)
P: (14.197,-10.023,-53.082)
C4': (13.172,-9.971,-56.630)
C2': (12.145,-10.074,-58.756)
C2: (7.694,-8.877,-60.177)
N1: (7.185,-7.642,-60.087)
N3: (8.711,-9.421,-59.514)
N6: (7.234,-5.545,-59.128)
N7: (9.621,-6.616,-57.481)
N9: (10.296,-8.733,-57.797)
O5': (14.544,-10.020,-54.636)
O3': (14.574,-9.713,-58.627)
Image (generated by PyMOL):