Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0302:0325
Extra
PDB:
ATOM 1 O3' U A 301 0.873 144.817 52.843 1.00 55.68 O
ATOM 2 P G A 302 1.307 146.363 52.953 1.00 58.72 P
ATOM 3 OP1 G A 302 1.206 146.749 54.385 1.00 56.64 O
ATOM 4 OP2 G A 302 0.571 147.156 51.923 1.00 56.42 O
ATOM 5 O5' G A 302 2.845 146.348 52.544 1.00 55.52 O
ATOM 6 C5' G A 302 3.792 145.572 53.296 1.00 53.01 C
ATOM 7 C4' G A 302 5.126 145.540 52.591 1.00 50.44 C
ATOM 8 O4' G A 302 5.020 144.788 51.352 1.00 49.79 O
ATOM 9 C3' G A 302 5.674 146.883 52.147 1.00 49.05 C
ATOM 10 O3' G A 302 6.273 147.596 53.217 1.00 46.61 O
ATOM 11 C2' G A 302 6.679 146.467 51.084 1.00 49.34 C
ATOM 12 O2' G A 302 7.881 145.972 51.640 1.00 50.83 O
ATOM 13 C1' G A 302 5.922 145.325 50.397 1.00 49.54 C
ATOM 14 N9 G A 302 5.156 145.812 49.254 1.00 48.93 N
ATOM 15 C8 G A 302 3.899 146.369 49.271 1.00 48.20 C
ATOM 16 N7 G A 302 3.507 146.782 48.099 1.00 47.96 N
ATOM 17 C5 G A 302 4.560 146.465 47.253 1.00 48.23 C
ATOM 18 C6 G A 302 4.718 146.688 45.864 1.00 48.55 C
ATOM 19 O6 G A 302 3.938 147.237 45.079 1.00 51.33 O
ATOM 20 N1 G A 302 5.937 146.202 45.405 1.00 46.58 N
ATOM 21 C2 G A 302 6.885 145.589 46.181 1.00 45.39 C
ATOM 22 N2 G A 302 7.995 145.191 45.550 1.00 44.93 N
ATOM 23 N3 G A 302 6.755 145.382 47.478 1.00 45.69 N
ATOM 24 C4 G A 302 5.576 145.845 47.946 1.00 47.72 C
ATOM 25 P G A 303 6.087 149.186 53.307 1.00 46.26 P
ATOM 26 OP1 G A 303 6.808 149.678 54.505 1.00 45.70 O
ATOM 27 OP2 G A 303 4.637 149.461 53.160 1.00 45.69 O
ATOM 28 O5' G A 303 6.841 149.725 52.010 1.00 45.06 O
TER
ATOM 1 O3' G B 324 16.116 144.828 46.950 1.00 39.38 O
ATOM 2 P A B 325 16.990 143.624 47.551 1.00 41.56 P
ATOM 3 OP1 A B 325 17.332 144.019 48.941 1.00 40.94 O
ATOM 4 OP2 A B 325 18.072 143.262 46.595 1.00 37.35 O
ATOM 5 O5' A B 325 15.968 142.412 47.665 1.00 42.03 O
ATOM 6 C5' A B 325 15.701 141.544 46.554 1.00 41.19 C
ATOM 7 C4' A B 325 15.286 140.193 47.070 1.00 41.14 C
ATOM 8 O4' A B 325 14.244 140.362 48.073 1.00 40.19 O
ATOM 9 C3' A B 325 14.736 139.204 46.052 1.00 41.05 C
ATOM 10 O3' A B 325 15.076 137.902 46.522 1.00 43.03 O
ATOM 11 C2' A B 325 13.229 139.408 46.195 1.00 40.82 C
ATOM 12 O2' A B 325 12.444 138.306 45.774 1.00 42.88 O
ATOM 13 C1' A B 325 13.115 139.597 47.707 1.00 38.71 C
ATOM 14 N9 A B 325 11.920 140.285 48.183 1.00 35.89 N
ATOM 15 C8 A B 325 11.130 139.911 49.240 1.00 34.15 C
ATOM 16 N7 A B 325 10.132 140.727 49.469 1.00 34.49 N
ATOM 17 C5 A B 325 10.266 141.700 48.490 1.00 33.66 C
ATOM 18 C6 A B 325 9.505 142.837 48.180 1.00 33.15 C
ATOM 19 N6 A B 325 8.416 143.206 48.855 1.00 32.41 N
ATOM 20 N1 A B 325 9.905 143.591 47.134 1.00 34.16 N
ATOM 21 C2 A B 325 10.995 143.218 46.453 1.00 34.30 C
ATOM 22 N3 A B 325 11.791 142.168 46.645 1.00 35.33 N
ATOM 23 C4 A B 325 11.364 141.439 47.689 1.00 34.58 C
ATOM 24 P C B 326 16.295 137.096 45.862 1.00 43.97 P
ATOM 25 OP1 C B 326 16.930 136.311 46.946 1.00 45.16 O
ATOM 26 OP2 C B 326 17.124 138.036 45.069 1.00 44.86 O
ATOM 27 O5' C B 326 15.567 136.088 44.867 1.00 44.31 O
TER
ATOM 2 P G A 302 1.307 146.363 52.953 1.00 58.72 P
ATOM 3 OP1 G A 302 1.206 146.749 54.385 1.00 56.64 O
ATOM 4 OP2 G A 302 0.571 147.156 51.923 1.00 56.42 O
ATOM 5 O5' G A 302 2.845 146.348 52.544 1.00 55.52 O
ATOM 6 C5' G A 302 3.792 145.572 53.296 1.00 53.01 C
ATOM 7 C4' G A 302 5.126 145.540 52.591 1.00 50.44 C
ATOM 8 O4' G A 302 5.020 144.788 51.352 1.00 49.79 O
ATOM 9 C3' G A 302 5.674 146.883 52.147 1.00 49.05 C
ATOM 10 O3' G A 302 6.273 147.596 53.217 1.00 46.61 O
ATOM 11 C2' G A 302 6.679 146.467 51.084 1.00 49.34 C
ATOM 12 O2' G A 302 7.881 145.972 51.640 1.00 50.83 O
ATOM 13 C1' G A 302 5.922 145.325 50.397 1.00 49.54 C
ATOM 14 N9 G A 302 5.156 145.812 49.254 1.00 48.93 N
ATOM 15 C8 G A 302 3.899 146.369 49.271 1.00 48.20 C
ATOM 16 N7 G A 302 3.507 146.782 48.099 1.00 47.96 N
ATOM 17 C5 G A 302 4.560 146.465 47.253 1.00 48.23 C
ATOM 18 C6 G A 302 4.718 146.688 45.864 1.00 48.55 C
ATOM 19 O6 G A 302 3.938 147.237 45.079 1.00 51.33 O
ATOM 20 N1 G A 302 5.937 146.202 45.405 1.00 46.58 N
ATOM 21 C2 G A 302 6.885 145.589 46.181 1.00 45.39 C
ATOM 22 N2 G A 302 7.995 145.191 45.550 1.00 44.93 N
ATOM 23 N3 G A 302 6.755 145.382 47.478 1.00 45.69 N
ATOM 24 C4 G A 302 5.576 145.845 47.946 1.00 47.72 C
ATOM 25 P G A 303 6.087 149.186 53.307 1.00 46.26 P
ATOM 26 OP1 G A 303 6.808 149.678 54.505 1.00 45.70 O
ATOM 27 OP2 G A 303 4.637 149.461 53.160 1.00 45.69 O
ATOM 28 O5' G A 303 6.841 149.725 52.010 1.00 45.06 O
TER
ATOM 1 O3' G B 324 16.116 144.828 46.950 1.00 39.38 O
ATOM 2 P A B 325 16.990 143.624 47.551 1.00 41.56 P
ATOM 3 OP1 A B 325 17.332 144.019 48.941 1.00 40.94 O
ATOM 4 OP2 A B 325 18.072 143.262 46.595 1.00 37.35 O
ATOM 5 O5' A B 325 15.968 142.412 47.665 1.00 42.03 O
ATOM 6 C5' A B 325 15.701 141.544 46.554 1.00 41.19 C
ATOM 7 C4' A B 325 15.286 140.193 47.070 1.00 41.14 C
ATOM 8 O4' A B 325 14.244 140.362 48.073 1.00 40.19 O
ATOM 9 C3' A B 325 14.736 139.204 46.052 1.00 41.05 C
ATOM 10 O3' A B 325 15.076 137.902 46.522 1.00 43.03 O
ATOM 11 C2' A B 325 13.229 139.408 46.195 1.00 40.82 C
ATOM 12 O2' A B 325 12.444 138.306 45.774 1.00 42.88 O
ATOM 13 C1' A B 325 13.115 139.597 47.707 1.00 38.71 C
ATOM 14 N9 A B 325 11.920 140.285 48.183 1.00 35.89 N
ATOM 15 C8 A B 325 11.130 139.911 49.240 1.00 34.15 C
ATOM 16 N7 A B 325 10.132 140.727 49.469 1.00 34.49 N
ATOM 17 C5 A B 325 10.266 141.700 48.490 1.00 33.66 C
ATOM 18 C6 A B 325 9.505 142.837 48.180 1.00 33.15 C
ATOM 19 N6 A B 325 8.416 143.206 48.855 1.00 32.41 N
ATOM 20 N1 A B 325 9.905 143.591 47.134 1.00 34.16 N
ATOM 21 C2 A B 325 10.995 143.218 46.453 1.00 34.30 C
ATOM 22 N3 A B 325 11.791 142.168 46.645 1.00 35.33 N
ATOM 23 C4 A B 325 11.364 141.439 47.689 1.00 34.58 C
ATOM 24 P C B 326 16.295 137.096 45.862 1.00 43.97 P
ATOM 25 OP1 C B 326 16.930 136.311 46.946 1.00 45.16 O
ATOM 26 OP2 C B 326 17.124 138.036 45.069 1.00 44.86 O
ATOM 27 O5' C B 326 15.567 136.088 44.867 1.00 44.31 O
TER
Atoms:
OP1: (1.206,146.749,54.385)
OP2: (0.571,147.156,51.923)
C3': (5.674,146.883,52.147)
C1': (5.922,145.325,50.397)
C5': (3.792,145.572,53.296)
O6: (3.938,147.237,45.079)
O4': (5.020,144.788,51.352)
C8: (3.899,146.369,49.271)
C2: (6.885,145.589,46.181)
C6: (4.718,146.688,45.864)
C5: (4.560,146.465,47.253)
C4: (5.576,145.845,47.946)
P: (1.307,146.363,52.953)
C4': (5.126,145.540,52.591)
C2': (6.679,146.467,51.084)
O2': (7.881,145.972,51.640)
N1: (5.937,146.202,45.405)
N2: (7.995,145.191,45.550)
N3: (6.755,145.382,47.478)
N7: (3.507,146.782,48.099)
N9: (5.156,145.812,49.254)
O5': (2.845,146.348,52.544)
O3': (6.273,147.596,53.217)
OP2: (0.571,147.156,51.923)
C3': (5.674,146.883,52.147)
C1': (5.922,145.325,50.397)
C5': (3.792,145.572,53.296)
O6: (3.938,147.237,45.079)
O4': (5.020,144.788,51.352)
C8: (3.899,146.369,49.271)
C2: (6.885,145.589,46.181)
C6: (4.718,146.688,45.864)
C5: (4.560,146.465,47.253)
C4: (5.576,145.845,47.946)
P: (1.307,146.363,52.953)
C4': (5.126,145.540,52.591)
C2': (6.679,146.467,51.084)
O2': (7.881,145.972,51.640)
N1: (5.937,146.202,45.405)
N2: (7.995,145.191,45.550)
N3: (6.755,145.382,47.478)
N7: (3.507,146.782,48.099)
N9: (5.156,145.812,49.254)
O5': (2.845,146.348,52.544)
O3': (6.273,147.596,53.217)
OP1: (17.332,144.019,48.941)
OP2: (18.072,143.262,46.595)
C3': (14.736,139.204,46.052)
C1': (13.115,139.597,47.707)
C5': (15.701,141.544,46.554)
O4': (14.244,140.362,48.073)
C8: (11.130,139.911,49.240)
O2': (12.444,138.306,45.774)
C6: (9.505,142.837,48.180)
C5: (10.266,141.700,48.490)
C4: (11.364,141.439,47.689)
P: (16.990,143.624,47.551)
C4': (15.286,140.193,47.070)
C2': (13.229,139.408,46.195)
C2: (10.995,143.218,46.453)
N1: (9.905,143.591,47.134)
N3: (11.791,142.168,46.645)
N6: (8.416,143.206,48.855)
N7: (10.132,140.727,49.469)
N9: (11.920,140.285,48.183)
O5': (15.968,142.412,47.665)
O3': (15.076,137.902,46.522)
OP2: (18.072,143.262,46.595)
C3': (14.736,139.204,46.052)
C1': (13.115,139.597,47.707)
C5': (15.701,141.544,46.554)
O4': (14.244,140.362,48.073)
C8: (11.130,139.911,49.240)
O2': (12.444,138.306,45.774)
C6: (9.505,142.837,48.180)
C5: (10.266,141.700,48.490)
C4: (11.364,141.439,47.689)
P: (16.990,143.624,47.551)
C4': (15.286,140.193,47.070)
C2': (13.229,139.408,46.195)
C2: (10.995,143.218,46.453)
N1: (9.905,143.591,47.134)
N3: (11.791,142.168,46.645)
N6: (8.416,143.206,48.855)
N7: (10.132,140.727,49.469)
N9: (11.920,140.285,48.183)
O5': (15.968,142.412,47.665)
O3': (15.076,137.902,46.522)
Image (generated by PyMOL):