Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A409:A226
Extra
PDB:
ATOM 1 O3' G A 408 -86.038 -44.104 78.636 1.00 0.01 O
ATOM 2 P G A 409 -87.569 -44.212 78.158 1.00 0.01 P
ATOM 3 OP1 G A 409 -87.547 -44.614 76.754 1.00 0.01 O
ATOM 4 OP2 G A 409 -88.241 -42.942 78.502 1.00 0.01 O
ATOM 5 O5' G A 409 -88.137 -45.408 79.045 1.00 0.01 O
ATOM 6 C5' G A 409 -87.764 -46.755 78.757 1.00 0.01 C
ATOM 7 C4' G A 409 -88.483 -47.772 79.618 1.00 0.01 C
ATOM 8 O4' G A 409 -88.173 -47.548 80.999 1.00 0.01 O
ATOM 9 C3' G A 409 -89.992 -47.762 79.525 1.00 0.01 C
ATOM 10 O3' G A 409 -90.461 -48.640 78.522 1.00 0.01 O
ATOM 11 C2' G A 409 -90.456 -48.154 80.922 1.00 0.01 C
ATOM 12 O2' G A 409 -90.568 -49.555 81.038 1.00 0.01 O
ATOM 13 C1' G A 409 -89.316 -47.687 81.802 1.00 0.01 C
ATOM 14 N9 G A 409 -89.590 -46.385 82.470 1.00 0.01 N
ATOM 15 C8 G A 409 -89.326 -45.107 81.981 1.00 0.01 C
ATOM 16 N7 G A 409 -89.624 -44.136 82.805 1.00 0.01 N
ATOM 17 C5 G A 409 -90.099 -44.813 83.924 1.00 0.01 C
ATOM 18 C6 G A 409 -90.593 -44.301 85.140 1.00 0.01 C
ATOM 19 O6 G A 409 -90.691 -43.113 85.470 1.00 0.01 O
ATOM 20 N1 G A 409 -90.991 -45.305 86.001 1.00 0.01 N
ATOM 21 C2 G A 409 -90.924 -46.619 85.732 1.00 0.01 C
ATOM 22 N2 G A 409 -91.350 -47.400 86.704 1.00 0.01 N
ATOM 23 N3 G A 409 -90.479 -47.135 84.620 1.00 0.01 N
ATOM 24 C4 G A 409 -90.078 -46.185 83.754 1.00 0.01 C
ATOM 25 P G A 410 -91.549 -48.154 77.456 1.00 2.12 P
ATOM 26 OP1 G A 410 -92.509 -47.305 78.158 1.00 2.12 O
ATOM 27 OP2 G A 410 -92.039 -49.362 76.774 1.00 2.12 O
ATOM 28 O5' G A 410 -90.699 -47.269 76.465 1.00 2.12 O
TER
ATOM 1 O3' A B 225 -90.091 -58.018 82.164 1.00 0.01 O
ATOM 2 P A B 226 -91.691 -58.001 82.184 1.00 0.01 P
ATOM 3 OP1 A B 226 -92.149 -59.397 81.987 1.00 0.01 O
ATOM 4 OP2 A B 226 -92.143 -56.951 81.241 1.00 0.01 O
ATOM 5 O5' A B 226 -91.988 -57.547 83.643 1.00 0.01 O
ATOM 6 C5' A B 226 -92.474 -58.445 84.609 1.00 0.01 C
ATOM 7 C4' A B 226 -92.889 -57.679 85.818 1.00 0.01 C
ATOM 8 O4' A B 226 -92.068 -56.462 85.902 1.00 0.01 O
ATOM 9 C3' A B 226 -94.308 -57.169 85.765 1.00 0.01 C
ATOM 10 O3' A B 226 -94.688 -56.855 87.079 1.00 0.01 O
ATOM 11 C2' A B 226 -94.107 -55.886 85.001 1.00 0.01 C
ATOM 12 O2' A B 226 -95.192 -54.997 84.995 1.00 0.01 O
ATOM 13 C1' A B 226 -92.923 -55.348 85.764 1.00 0.01 C
ATOM 14 N9 A B 226 -92.243 -54.265 85.087 1.00 0.01 N
ATOM 15 C8 A B 226 -91.867 -54.202 83.790 1.00 0.01 C
ATOM 16 N7 A B 226 -91.401 -53.024 83.460 1.00 0.01 N
ATOM 17 C5 A B 226 -91.505 -52.271 84.610 1.00 0.01 C
ATOM 18 C6 A B 226 -91.177 -50.951 84.892 1.00 0.01 C
ATOM 19 N6 A B 226 -90.627 -50.136 84.003 1.00 0.01 N
ATOM 20 N1 A B 226 -91.423 -50.507 86.132 1.00 0.01 N
ATOM 21 C2 A B 226 -91.946 -51.344 87.025 1.00 0.01 C
ATOM 22 N3 A B 226 -92.297 -52.608 86.873 1.00 0.01 N
ATOM 23 C4 A B 226 -92.047 -53.017 85.621 1.00 0.01 C
ATOM 24 P C B 227 -96.146 -57.190 87.603 1.00 12.33 P
ATOM 25 OP1 C B 227 -96.314 -58.683 87.503 1.00 12.33 O
ATOM 26 OP2 C B 227 -97.095 -56.285 86.858 1.00 12.33 O
ATOM 27 O5' C B 227 -96.060 -56.736 89.138 1.00 12.33 O
TER
ATOM 2 P G A 409 -87.569 -44.212 78.158 1.00 0.01 P
ATOM 3 OP1 G A 409 -87.547 -44.614 76.754 1.00 0.01 O
ATOM 4 OP2 G A 409 -88.241 -42.942 78.502 1.00 0.01 O
ATOM 5 O5' G A 409 -88.137 -45.408 79.045 1.00 0.01 O
ATOM 6 C5' G A 409 -87.764 -46.755 78.757 1.00 0.01 C
ATOM 7 C4' G A 409 -88.483 -47.772 79.618 1.00 0.01 C
ATOM 8 O4' G A 409 -88.173 -47.548 80.999 1.00 0.01 O
ATOM 9 C3' G A 409 -89.992 -47.762 79.525 1.00 0.01 C
ATOM 10 O3' G A 409 -90.461 -48.640 78.522 1.00 0.01 O
ATOM 11 C2' G A 409 -90.456 -48.154 80.922 1.00 0.01 C
ATOM 12 O2' G A 409 -90.568 -49.555 81.038 1.00 0.01 O
ATOM 13 C1' G A 409 -89.316 -47.687 81.802 1.00 0.01 C
ATOM 14 N9 G A 409 -89.590 -46.385 82.470 1.00 0.01 N
ATOM 15 C8 G A 409 -89.326 -45.107 81.981 1.00 0.01 C
ATOM 16 N7 G A 409 -89.624 -44.136 82.805 1.00 0.01 N
ATOM 17 C5 G A 409 -90.099 -44.813 83.924 1.00 0.01 C
ATOM 18 C6 G A 409 -90.593 -44.301 85.140 1.00 0.01 C
ATOM 19 O6 G A 409 -90.691 -43.113 85.470 1.00 0.01 O
ATOM 20 N1 G A 409 -90.991 -45.305 86.001 1.00 0.01 N
ATOM 21 C2 G A 409 -90.924 -46.619 85.732 1.00 0.01 C
ATOM 22 N2 G A 409 -91.350 -47.400 86.704 1.00 0.01 N
ATOM 23 N3 G A 409 -90.479 -47.135 84.620 1.00 0.01 N
ATOM 24 C4 G A 409 -90.078 -46.185 83.754 1.00 0.01 C
ATOM 25 P G A 410 -91.549 -48.154 77.456 1.00 2.12 P
ATOM 26 OP1 G A 410 -92.509 -47.305 78.158 1.00 2.12 O
ATOM 27 OP2 G A 410 -92.039 -49.362 76.774 1.00 2.12 O
ATOM 28 O5' G A 410 -90.699 -47.269 76.465 1.00 2.12 O
TER
ATOM 1 O3' A B 225 -90.091 -58.018 82.164 1.00 0.01 O
ATOM 2 P A B 226 -91.691 -58.001 82.184 1.00 0.01 P
ATOM 3 OP1 A B 226 -92.149 -59.397 81.987 1.00 0.01 O
ATOM 4 OP2 A B 226 -92.143 -56.951 81.241 1.00 0.01 O
ATOM 5 O5' A B 226 -91.988 -57.547 83.643 1.00 0.01 O
ATOM 6 C5' A B 226 -92.474 -58.445 84.609 1.00 0.01 C
ATOM 7 C4' A B 226 -92.889 -57.679 85.818 1.00 0.01 C
ATOM 8 O4' A B 226 -92.068 -56.462 85.902 1.00 0.01 O
ATOM 9 C3' A B 226 -94.308 -57.169 85.765 1.00 0.01 C
ATOM 10 O3' A B 226 -94.688 -56.855 87.079 1.00 0.01 O
ATOM 11 C2' A B 226 -94.107 -55.886 85.001 1.00 0.01 C
ATOM 12 O2' A B 226 -95.192 -54.997 84.995 1.00 0.01 O
ATOM 13 C1' A B 226 -92.923 -55.348 85.764 1.00 0.01 C
ATOM 14 N9 A B 226 -92.243 -54.265 85.087 1.00 0.01 N
ATOM 15 C8 A B 226 -91.867 -54.202 83.790 1.00 0.01 C
ATOM 16 N7 A B 226 -91.401 -53.024 83.460 1.00 0.01 N
ATOM 17 C5 A B 226 -91.505 -52.271 84.610 1.00 0.01 C
ATOM 18 C6 A B 226 -91.177 -50.951 84.892 1.00 0.01 C
ATOM 19 N6 A B 226 -90.627 -50.136 84.003 1.00 0.01 N
ATOM 20 N1 A B 226 -91.423 -50.507 86.132 1.00 0.01 N
ATOM 21 C2 A B 226 -91.946 -51.344 87.025 1.00 0.01 C
ATOM 22 N3 A B 226 -92.297 -52.608 86.873 1.00 0.01 N
ATOM 23 C4 A B 226 -92.047 -53.017 85.621 1.00 0.01 C
ATOM 24 P C B 227 -96.146 -57.190 87.603 1.00 12.33 P
ATOM 25 OP1 C B 227 -96.314 -58.683 87.503 1.00 12.33 O
ATOM 26 OP2 C B 227 -97.095 -56.285 86.858 1.00 12.33 O
ATOM 27 O5' C B 227 -96.060 -56.736 89.138 1.00 12.33 O
TER
Atoms:
OP1: (-87.547,-44.614,76.754)
OP2: (-88.241,-42.942,78.502)
C3': (-89.992,-47.762,79.525)
C1': (-89.316,-47.687,81.802)
C5': (-87.764,-46.755,78.757)
O6: (-90.691,-43.113,85.470)
O4': (-88.173,-47.548,80.999)
C8: (-89.326,-45.107,81.981)
C2: (-90.924,-46.619,85.732)
C6: (-90.593,-44.301,85.140)
C5: (-90.099,-44.813,83.924)
C4: (-90.078,-46.185,83.754)
P: (-87.569,-44.212,78.158)
C4': (-88.483,-47.772,79.618)
C2': (-90.456,-48.154,80.922)
O2': (-90.568,-49.555,81.038)
N1: (-90.991,-45.305,86.001)
N2: (-91.350,-47.400,86.704)
N3: (-90.479,-47.135,84.620)
N7: (-89.624,-44.136,82.805)
N9: (-89.590,-46.385,82.470)
O5': (-88.137,-45.408,79.045)
O3': (-90.461,-48.640,78.522)
OP2: (-88.241,-42.942,78.502)
C3': (-89.992,-47.762,79.525)
C1': (-89.316,-47.687,81.802)
C5': (-87.764,-46.755,78.757)
O6: (-90.691,-43.113,85.470)
O4': (-88.173,-47.548,80.999)
C8: (-89.326,-45.107,81.981)
C2: (-90.924,-46.619,85.732)
C6: (-90.593,-44.301,85.140)
C5: (-90.099,-44.813,83.924)
C4: (-90.078,-46.185,83.754)
P: (-87.569,-44.212,78.158)
C4': (-88.483,-47.772,79.618)
C2': (-90.456,-48.154,80.922)
O2': (-90.568,-49.555,81.038)
N1: (-90.991,-45.305,86.001)
N2: (-91.350,-47.400,86.704)
N3: (-90.479,-47.135,84.620)
N7: (-89.624,-44.136,82.805)
N9: (-89.590,-46.385,82.470)
O5': (-88.137,-45.408,79.045)
O3': (-90.461,-48.640,78.522)
OP1: (-92.149,-59.397,81.987)
OP2: (-92.143,-56.951,81.241)
C3': (-94.308,-57.169,85.765)
C1': (-92.923,-55.348,85.764)
C5': (-92.474,-58.445,84.609)
O4': (-92.068,-56.462,85.902)
C8: (-91.867,-54.202,83.790)
O2': (-95.192,-54.997,84.995)
C6: (-91.177,-50.951,84.892)
C5: (-91.505,-52.271,84.610)
C4: (-92.047,-53.017,85.621)
P: (-91.691,-58.001,82.184)
C4': (-92.889,-57.679,85.818)
C2': (-94.107,-55.886,85.001)
C2: (-91.946,-51.344,87.025)
N1: (-91.423,-50.507,86.132)
N3: (-92.297,-52.608,86.873)
N6: (-90.627,-50.136,84.003)
N7: (-91.401,-53.024,83.460)
N9: (-92.243,-54.265,85.087)
O5': (-91.988,-57.547,83.643)
O3': (-94.688,-56.855,87.079)
OP2: (-92.143,-56.951,81.241)
C3': (-94.308,-57.169,85.765)
C1': (-92.923,-55.348,85.764)
C5': (-92.474,-58.445,84.609)
O4': (-92.068,-56.462,85.902)
C8: (-91.867,-54.202,83.790)
O2': (-95.192,-54.997,84.995)
C6: (-91.177,-50.951,84.892)
C5: (-91.505,-52.271,84.610)
C4: (-92.047,-53.017,85.621)
P: (-91.691,-58.001,82.184)
C4': (-92.889,-57.679,85.818)
C2': (-94.107,-55.886,85.001)
C2: (-91.946,-51.344,87.025)
N1: (-91.423,-50.507,86.132)
N3: (-92.297,-52.608,86.873)
N6: (-90.627,-50.136,84.003)
N7: (-91.401,-53.024,83.460)
N9: (-92.243,-54.265,85.087)
O5': (-91.988,-57.547,83.643)
O3': (-94.688,-56.855,87.079)
Image (generated by PyMOL):