Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2687:A1748
Extra
PDB:
ATOM 1 O3' G A2686 -18.626 -47.177 -36.386 1.00 0.01 O
ATOM 2 P G A2687 -17.964 -46.307 -35.233 1.00 0.01 P
ATOM 3 OP1 G A2687 -16.720 -45.735 -35.781 1.00 0.01 O
ATOM 4 OP2 G A2687 -17.882 -47.160 -34.046 1.00 0.01 O
ATOM 5 O5' G A2687 -19.040 -45.174 -35.002 1.00 0.01 O
ATOM 6 C5' G A2687 -19.045 -44.005 -35.782 1.00 0.01 C
ATOM 7 C4' G A2687 -20.182 -43.134 -35.387 1.00 0.01 C
ATOM 8 O4' G A2687 -21.340 -43.967 -35.176 1.00 0.01 O
ATOM 9 C3' G A2687 -20.042 -42.427 -34.058 1.00 0.01 C
ATOM 10 O3' G A2687 -19.211 -41.297 -34.104 1.00 0.01 O
ATOM 11 C2' G A2687 -21.490 -42.128 -33.723 1.00 0.01 C
ATOM 12 O2' G A2687 -22.010 -41.140 -34.592 1.00 0.01 O
ATOM 13 C1' G A2687 -22.123 -43.437 -34.125 1.00 0.01 C
ATOM 14 N9 G A2687 -22.174 -44.412 -33.019 1.00 0.01 N
ATOM 15 C8 G A2687 -21.500 -45.585 -32.936 1.00 0.01 C
ATOM 16 N7 G A2687 -21.794 -46.258 -31.866 1.00 0.01 N
ATOM 17 C5 G A2687 -22.726 -45.489 -31.225 1.00 0.01 C
ATOM 18 C6 G A2687 -23.387 -45.708 -30.008 1.00 0.01 C
ATOM 19 O6 G A2687 -23.291 -46.668 -29.221 1.00 0.01 O
ATOM 20 N1 G A2687 -24.234 -44.659 -29.734 1.00 0.01 N
ATOM 21 C2 G A2687 -24.417 -43.574 -30.506 1.00 0.01 C
ATOM 22 N2 G A2687 -25.284 -42.691 -30.049 1.00 0.01 N
ATOM 23 N3 G A2687 -23.814 -43.366 -31.635 1.00 0.01 N
ATOM 24 C4 G A2687 -22.982 -44.357 -31.929 1.00 0.01 C
ATOM 25 P U A2688 -17.953 -41.195 -33.125 1.00 0.01 P
ATOM 26 OP1 U A2688 -16.940 -40.388 -33.800 1.00 0.01 O
ATOM 27 OP2 U A2688 -17.586 -42.545 -32.717 1.00 0.01 O
ATOM 28 O5' U A2688 -18.558 -40.405 -31.899 1.00 0.01 O
TER
ATOM 1 O3' A B1747 -27.128 -34.607 -38.128 1.00 0.01 O
ATOM 2 P A B1748 -25.811 -33.795 -37.747 1.00 0.01 P
ATOM 3 OP1 A B1748 -25.856 -32.526 -38.489 1.00 0.01 O
ATOM 4 OP2 A B1748 -24.674 -34.701 -37.959 1.00 0.01 O
ATOM 5 O5' A B1748 -26.008 -33.514 -36.215 1.00 0.01 O
ATOM 6 C5' A B1748 -27.139 -32.822 -35.761 1.00 0.01 C
ATOM 7 C4' A B1748 -27.732 -33.494 -34.567 1.00 0.01 C
ATOM 8 O4' A B1748 -27.796 -34.913 -34.790 1.00 0.01 O
ATOM 9 C3' A B1748 -26.958 -33.360 -33.279 1.00 0.01 C
ATOM 10 O3' A B1748 -27.233 -32.134 -32.637 1.00 0.01 O
ATOM 11 C2' A B1748 -27.424 -34.570 -32.474 1.00 0.01 C
ATOM 12 O2' A B1748 -28.626 -34.270 -31.782 1.00 0.01 O
ATOM 13 C1' A B1748 -27.750 -35.589 -33.561 1.00 0.01 C
ATOM 14 N9 A B1748 -26.763 -36.674 -33.645 1.00 0.01 N
ATOM 15 C8 A B1748 -25.804 -36.844 -34.600 1.00 0.01 C
ATOM 16 N7 A B1748 -25.085 -37.918 -34.438 1.00 0.01 N
ATOM 17 C5 A B1748 -25.621 -38.510 -33.311 1.00 0.01 C
ATOM 18 C6 A B1748 -25.286 -39.670 -32.631 1.00 0.01 C
ATOM 19 N6 A B1748 -24.306 -40.456 -33.013 1.00 0.01 N
ATOM 20 N1 A B1748 -25.979 -40.000 -31.561 1.00 0.01 N
ATOM 21 C2 A B1748 -26.958 -39.190 -31.209 1.00 0.01 C
ATOM 22 N3 A B1748 -27.389 -38.063 -31.748 1.00 0.01 N
ATOM 23 C4 A B1748 -26.660 -37.764 -32.819 1.00 0.01 C
ATOM 24 P G B1749 -26.059 -31.097 -32.302 1.00 0.01 P
ATOM 25 OP1 G B1749 -26.702 -29.927 -31.656 1.00 0.01 O
ATOM 26 OP2 G B1749 -25.279 -30.887 -33.534 1.00 0.01 O
ATOM 27 O5' G B1749 -25.198 -31.875 -31.239 1.00 0.01 O
TER
ATOM 2 P G A2687 -17.964 -46.307 -35.233 1.00 0.01 P
ATOM 3 OP1 G A2687 -16.720 -45.735 -35.781 1.00 0.01 O
ATOM 4 OP2 G A2687 -17.882 -47.160 -34.046 1.00 0.01 O
ATOM 5 O5' G A2687 -19.040 -45.174 -35.002 1.00 0.01 O
ATOM 6 C5' G A2687 -19.045 -44.005 -35.782 1.00 0.01 C
ATOM 7 C4' G A2687 -20.182 -43.134 -35.387 1.00 0.01 C
ATOM 8 O4' G A2687 -21.340 -43.967 -35.176 1.00 0.01 O
ATOM 9 C3' G A2687 -20.042 -42.427 -34.058 1.00 0.01 C
ATOM 10 O3' G A2687 -19.211 -41.297 -34.104 1.00 0.01 O
ATOM 11 C2' G A2687 -21.490 -42.128 -33.723 1.00 0.01 C
ATOM 12 O2' G A2687 -22.010 -41.140 -34.592 1.00 0.01 O
ATOM 13 C1' G A2687 -22.123 -43.437 -34.125 1.00 0.01 C
ATOM 14 N9 G A2687 -22.174 -44.412 -33.019 1.00 0.01 N
ATOM 15 C8 G A2687 -21.500 -45.585 -32.936 1.00 0.01 C
ATOM 16 N7 G A2687 -21.794 -46.258 -31.866 1.00 0.01 N
ATOM 17 C5 G A2687 -22.726 -45.489 -31.225 1.00 0.01 C
ATOM 18 C6 G A2687 -23.387 -45.708 -30.008 1.00 0.01 C
ATOM 19 O6 G A2687 -23.291 -46.668 -29.221 1.00 0.01 O
ATOM 20 N1 G A2687 -24.234 -44.659 -29.734 1.00 0.01 N
ATOM 21 C2 G A2687 -24.417 -43.574 -30.506 1.00 0.01 C
ATOM 22 N2 G A2687 -25.284 -42.691 -30.049 1.00 0.01 N
ATOM 23 N3 G A2687 -23.814 -43.366 -31.635 1.00 0.01 N
ATOM 24 C4 G A2687 -22.982 -44.357 -31.929 1.00 0.01 C
ATOM 25 P U A2688 -17.953 -41.195 -33.125 1.00 0.01 P
ATOM 26 OP1 U A2688 -16.940 -40.388 -33.800 1.00 0.01 O
ATOM 27 OP2 U A2688 -17.586 -42.545 -32.717 1.00 0.01 O
ATOM 28 O5' U A2688 -18.558 -40.405 -31.899 1.00 0.01 O
TER
ATOM 1 O3' A B1747 -27.128 -34.607 -38.128 1.00 0.01 O
ATOM 2 P A B1748 -25.811 -33.795 -37.747 1.00 0.01 P
ATOM 3 OP1 A B1748 -25.856 -32.526 -38.489 1.00 0.01 O
ATOM 4 OP2 A B1748 -24.674 -34.701 -37.959 1.00 0.01 O
ATOM 5 O5' A B1748 -26.008 -33.514 -36.215 1.00 0.01 O
ATOM 6 C5' A B1748 -27.139 -32.822 -35.761 1.00 0.01 C
ATOM 7 C4' A B1748 -27.732 -33.494 -34.567 1.00 0.01 C
ATOM 8 O4' A B1748 -27.796 -34.913 -34.790 1.00 0.01 O
ATOM 9 C3' A B1748 -26.958 -33.360 -33.279 1.00 0.01 C
ATOM 10 O3' A B1748 -27.233 -32.134 -32.637 1.00 0.01 O
ATOM 11 C2' A B1748 -27.424 -34.570 -32.474 1.00 0.01 C
ATOM 12 O2' A B1748 -28.626 -34.270 -31.782 1.00 0.01 O
ATOM 13 C1' A B1748 -27.750 -35.589 -33.561 1.00 0.01 C
ATOM 14 N9 A B1748 -26.763 -36.674 -33.645 1.00 0.01 N
ATOM 15 C8 A B1748 -25.804 -36.844 -34.600 1.00 0.01 C
ATOM 16 N7 A B1748 -25.085 -37.918 -34.438 1.00 0.01 N
ATOM 17 C5 A B1748 -25.621 -38.510 -33.311 1.00 0.01 C
ATOM 18 C6 A B1748 -25.286 -39.670 -32.631 1.00 0.01 C
ATOM 19 N6 A B1748 -24.306 -40.456 -33.013 1.00 0.01 N
ATOM 20 N1 A B1748 -25.979 -40.000 -31.561 1.00 0.01 N
ATOM 21 C2 A B1748 -26.958 -39.190 -31.209 1.00 0.01 C
ATOM 22 N3 A B1748 -27.389 -38.063 -31.748 1.00 0.01 N
ATOM 23 C4 A B1748 -26.660 -37.764 -32.819 1.00 0.01 C
ATOM 24 P G B1749 -26.059 -31.097 -32.302 1.00 0.01 P
ATOM 25 OP1 G B1749 -26.702 -29.927 -31.656 1.00 0.01 O
ATOM 26 OP2 G B1749 -25.279 -30.887 -33.534 1.00 0.01 O
ATOM 27 O5' G B1749 -25.198 -31.875 -31.239 1.00 0.01 O
TER
Atoms:
OP1: (-16.720,-45.735,-35.781)
OP2: (-17.882,-47.160,-34.046)
C3': (-20.042,-42.427,-34.058)
C1': (-22.123,-43.437,-34.125)
C5': (-19.045,-44.005,-35.782)
O6: (-23.291,-46.668,-29.221)
O4': (-21.340,-43.967,-35.176)
C8: (-21.500,-45.585,-32.936)
C2: (-24.417,-43.574,-30.506)
C6: (-23.387,-45.708,-30.008)
C5: (-22.726,-45.489,-31.225)
C4: (-22.982,-44.357,-31.929)
P: (-17.964,-46.307,-35.233)
C4': (-20.182,-43.134,-35.387)
C2': (-21.490,-42.128,-33.723)
O2': (-22.010,-41.140,-34.592)
N1: (-24.234,-44.659,-29.734)
N2: (-25.284,-42.691,-30.049)
N3: (-23.814,-43.366,-31.635)
N7: (-21.794,-46.258,-31.866)
N9: (-22.174,-44.412,-33.019)
O5': (-19.040,-45.174,-35.002)
O3': (-19.211,-41.297,-34.104)
OP2: (-17.882,-47.160,-34.046)
C3': (-20.042,-42.427,-34.058)
C1': (-22.123,-43.437,-34.125)
C5': (-19.045,-44.005,-35.782)
O6: (-23.291,-46.668,-29.221)
O4': (-21.340,-43.967,-35.176)
C8: (-21.500,-45.585,-32.936)
C2: (-24.417,-43.574,-30.506)
C6: (-23.387,-45.708,-30.008)
C5: (-22.726,-45.489,-31.225)
C4: (-22.982,-44.357,-31.929)
P: (-17.964,-46.307,-35.233)
C4': (-20.182,-43.134,-35.387)
C2': (-21.490,-42.128,-33.723)
O2': (-22.010,-41.140,-34.592)
N1: (-24.234,-44.659,-29.734)
N2: (-25.284,-42.691,-30.049)
N3: (-23.814,-43.366,-31.635)
N7: (-21.794,-46.258,-31.866)
N9: (-22.174,-44.412,-33.019)
O5': (-19.040,-45.174,-35.002)
O3': (-19.211,-41.297,-34.104)
OP1: (-25.856,-32.526,-38.489)
OP2: (-24.674,-34.701,-37.959)
C3': (-26.958,-33.360,-33.279)
C1': (-27.750,-35.589,-33.561)
C5': (-27.139,-32.822,-35.761)
O4': (-27.796,-34.913,-34.790)
C8: (-25.804,-36.844,-34.600)
O2': (-28.626,-34.270,-31.782)
C6: (-25.286,-39.670,-32.631)
C5: (-25.621,-38.510,-33.311)
C4: (-26.660,-37.764,-32.819)
P: (-25.811,-33.795,-37.747)
C4': (-27.732,-33.494,-34.567)
C2': (-27.424,-34.570,-32.474)
C2: (-26.958,-39.190,-31.209)
N1: (-25.979,-40.000,-31.561)
N3: (-27.389,-38.063,-31.748)
N6: (-24.306,-40.456,-33.013)
N7: (-25.085,-37.918,-34.438)
N9: (-26.763,-36.674,-33.645)
O5': (-26.008,-33.514,-36.215)
O3': (-27.233,-32.134,-32.637)
OP2: (-24.674,-34.701,-37.959)
C3': (-26.958,-33.360,-33.279)
C1': (-27.750,-35.589,-33.561)
C5': (-27.139,-32.822,-35.761)
O4': (-27.796,-34.913,-34.790)
C8: (-25.804,-36.844,-34.600)
O2': (-28.626,-34.270,-31.782)
C6: (-25.286,-39.670,-32.631)
C5: (-25.621,-38.510,-33.311)
C4: (-26.660,-37.764,-32.819)
P: (-25.811,-33.795,-37.747)
C4': (-27.732,-33.494,-34.567)
C2': (-27.424,-34.570,-32.474)
C2: (-26.958,-39.190,-31.209)
N1: (-25.979,-40.000,-31.561)
N3: (-27.389,-38.063,-31.748)
N6: (-24.306,-40.456,-33.013)
N7: (-25.085,-37.918,-34.438)
N9: (-26.763,-36.674,-33.645)
O5': (-26.008,-33.514,-36.215)
O3': (-27.233,-32.134,-32.637)
Image (generated by PyMOL):