ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q81:A173:A427

Extra

PDB:
ATOM 1 O3' G A 172 65.890 126.175 23.535 1.00 46.01 O
ATOM 2 P G A 173 64.840 127.381 23.363 1.00 49.02 P
ATOM 3 OP1 G A 173 64.859 127.765 21.943 1.00 48.76 O
ATOM 4 OP2 G A 173 65.094 128.414 24.390 1.00 50.80 O
ATOM 5 O5' G A 173 63.421 126.725 23.681 1.00 50.86 O
ATOM 6 C5' G A 173 62.928 125.621 22.889 1.00 53.29 C
ATOM 7 C4' G A 173 62.017 124.733 23.717 1.00 54.97 C
ATOM 8 O4' G A 173 62.398 124.837 25.121 1.00 55.63 O
ATOM 9 C3' G A 173 60.506 125.001 23.671 1.00 54.57 C
ATOM 10 O3' G A 173 59.813 123.777 23.856 1.00 55.58 O
ATOM 11 C2' G A 173 60.265 125.793 24.952 1.00 54.41 C
ATOM 12 O2' G A 173 58.966 125.645 25.497 1.00 52.76 O
ATOM 13 C1' G A 173 61.253 125.120 25.894 1.00 54.44 C
ATOM 14 N9 G A 173 61.637 125.962 27.017 1.00 54.98 N
ATOM 15 C8 G A 173 62.262 127.186 26.981 1.00 55.37 C
ATOM 16 N7 G A 173 62.444 127.700 28.166 1.00 55.65 N
ATOM 17 C5 G A 173 61.921 126.749 29.033 1.00 55.65 C
ATOM 18 C6 G A 173 61.825 126.750 30.439 1.00 55.29 C
ATOM 19 O6 G A 173 62.188 127.618 31.223 1.00 57.23 O
ATOM 20 N1 G A 173 61.218 125.598 30.918 1.00 53.97 N
ATOM 21 C2 G A 173 60.743 124.582 30.140 1.00 54.56 C
ATOM 22 N2 G A 173 60.153 123.561 30.782 1.00 54.25 N
ATOM 23 N3 G A 173 60.827 124.567 28.821 1.00 55.42 N
ATOM 24 C4 G A 173 61.422 125.675 28.339 1.00 55.12 C
ATOM 25 P A A 174 59.712 122.714 22.662 1.00 55.47 P
ATOM 26 OP1 A A 174 61.003 122.688 21.918 1.00 56.08 O
ATOM 27 OP2 A A 174 58.443 122.980 21.930 1.00 57.16 O
ATOM 28 O5' A A 174 59.597 121.335 23.452 1.00 54.33 O
TER

ATOM 1 O3' C B 426 55.856 112.429 30.781 1.00 46.81 O
ATOM 2 P A B 427 55.067 113.436 31.742 1.00 47.28 P
ATOM 3 OP1 A B 427 54.404 112.573 32.742 1.00 49.37 O
ATOM 4 OP2 A B 427 54.257 114.383 30.935 1.00 46.00 O
ATOM 5 O5' A B 427 56.217 114.260 32.467 1.00 46.99 O
ATOM 6 C5' A B 427 57.108 113.631 33.404 1.00 46.51 C
ATOM 7 C4' A B 427 58.102 114.642 33.921 1.00 48.18 C
ATOM 8 O4' A B 427 58.962 115.065 32.829 1.00 49.75 O
ATOM 9 C3' A B 427 57.481 115.941 34.407 1.00 48.65 C
ATOM 10 O3' A B 427 56.977 115.858 35.732 1.00 48.71 O
ATOM 11 C2' A B 427 58.628 116.926 34.265 1.00 48.41 C
ATOM 12 O2' A B 427 59.560 116.835 35.310 1.00 47.30 O
ATOM 13 C1' A B 427 59.272 116.444 32.967 1.00 49.25 C
ATOM 14 N9 A B 427 58.765 117.159 31.795 1.00 51.46 N
ATOM 15 C8 A B 427 57.846 116.753 30.851 1.00 53.09 C
ATOM 16 N7 A B 427 57.606 117.653 29.925 1.00 53.95 N
ATOM 17 C5 A B 427 58.419 118.718 30.282 1.00 54.00 C
ATOM 18 C6 A B 427 58.620 119.978 29.712 1.00 54.64 C
ATOM 19 N6 A B 427 57.962 120.415 28.641 1.00 56.21 N
ATOM 20 N1 A B 427 59.518 120.796 30.299 1.00 54.80 N
ATOM 21 C2 A B 427 60.142 120.375 31.405 1.00 53.58 C
ATOM 22 N3 A B 427 60.020 119.224 32.049 1.00 52.26 N
ATOM 23 C4 A B 427 59.138 118.427 31.427 1.00 52.64 C
ATOM 24 P C B 428 55.647 116.665 36.120 1.00 50.01 P
ATOM 25 OP1 C B 428 55.213 116.158 37.426 1.00 52.04 O
ATOM 26 OP2 C B 428 54.700 116.651 34.986 1.00 52.03 O
ATOM 27 O5' C B 428 56.138 118.164 36.309 1.00 51.29 O
TER

Atoms:
OP1: (64.859,127.765,21.943)
OP2: (65.094,128.414,24.390)
C3': (60.506,125.001,23.671)
C1': (61.253,125.120,25.894)
C5': (62.928,125.621,22.889)
O6: (62.188,127.618,31.223)
O4': (62.398,124.837,25.121)
C8: (62.262,127.186,26.981)
C2: (60.743,124.582,30.140)
C6: (61.825,126.750,30.439)
C5: (61.921,126.749,29.033)
C4: (61.422,125.675,28.339)
P: (64.840,127.381,23.363)
C4': (62.017,124.733,23.717)
C2': (60.265,125.793,24.952)
O2': (58.966,125.645,25.497)
N1: (61.218,125.598,30.918)
N2: (60.153,123.561,30.782)
N3: (60.827,124.567,28.821)
N7: (62.444,127.700,28.166)
N9: (61.637,125.962,27.017)
O5': (63.421,126.725,23.681)
O3': (59.813,123.777,23.856)
OP1: (54.404,112.573,32.742)
OP2: (54.257,114.383,30.935)
C3': (57.481,115.941,34.407)
C1': (59.272,116.444,32.967)
C5': (57.108,113.631,33.404)
O4': (58.962,115.065,32.829)
C8: (57.846,116.753,30.851)
O2': (59.560,116.835,35.310)
C6: (58.620,119.978,29.712)
C5: (58.419,118.718,30.282)
C4: (59.138,118.427,31.427)
P: (55.067,113.436,31.742)
C4': (58.102,114.642,33.921)
C2': (58.628,116.926,34.265)
C2: (60.142,120.375,31.405)
N1: (59.518,120.796,30.299)
N3: (60.020,119.224,32.049)
N6: (57.962,120.415,28.641)
N7: (57.606,117.653,29.925)
N9: (58.765,117.159,31.795)
O5': (56.217,114.260,32.467)
O3': (56.977,115.858,35.732)
Image (generated by PyMOL):
PyMOL image
show in jmol