Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02498:02680
Extra
PDB:
ATOM 1 O3' G A2497 44.734 150.964 119.920 1.00 38.40 O
ATOM 2 P G A2498 43.180 151.341 119.858 1.00 40.56 P
ATOM 3 OP1 G A2498 42.938 152.357 120.901 1.00 37.03 O
ATOM 4 OP2 G A2498 42.394 150.072 119.863 1.00 36.28 O
ATOM 5 O5' G A2498 43.055 152.066 118.447 1.00 39.00 O
ATOM 6 C5' G A2498 43.892 153.188 118.153 1.00 41.99 C
ATOM 7 C4' G A2498 43.519 153.801 116.833 1.00 42.88 C
ATOM 8 O4' G A2498 43.888 152.917 115.742 1.00 42.67 O
ATOM 9 C3' G A2498 42.043 154.044 116.592 1.00 44.20 C
ATOM 10 O3' G A2498 41.529 155.158 117.327 1.00 47.76 O
ATOM 11 C2' G A2498 42.035 154.229 115.081 1.00 43.31 C
ATOM 12 O2' G A2498 42.566 155.480 114.688 1.00 39.88 O
ATOM 13 C1' G A2498 42.991 153.109 114.654 1.00 42.14 C
ATOM 14 N9 G A2498 42.270 151.857 114.422 1.00 41.37 N
ATOM 15 C8 G A2498 42.232 150.764 115.248 1.00 42.11 C
ATOM 16 N7 G A2498 41.459 149.812 114.805 1.00 41.34 N
ATOM 17 C5 G A2498 40.963 150.301 113.608 1.00 41.26 C
ATOM 18 C6 G A2498 40.064 149.718 112.687 1.00 41.78 C
ATOM 19 O6 G A2498 39.493 148.623 112.755 1.00 43.84 O
ATOM 20 N1 G A2498 39.837 150.549 111.599 1.00 39.91 N
ATOM 21 C2 G A2498 40.392 151.782 111.426 1.00 41.99 C
ATOM 22 N2 G A2498 40.054 152.424 110.310 1.00 42.78 N
ATOM 23 N3 G A2498 41.222 152.347 112.285 1.00 43.50 N
ATOM 24 C4 G A2498 41.464 151.554 113.347 1.00 41.56 C
ATOM 25 P G A2499 39.934 155.352 117.486 1.00 46.61 P
ATOM 26 OP1 G A2499 39.754 156.499 118.414 1.00 45.66 O
ATOM 27 OP2 G A2499 39.283 154.048 117.792 1.00 44.06 O
ATOM 28 O5' G A2499 39.492 155.824 116.028 1.00 47.26 O
TER
ATOM 1 O3' A B2679 47.551 161.980 111.264 1.00 43.73 O
ATOM 2 P A B2680 45.976 162.183 111.526 1.00 45.55 P
ATOM 3 OP1 A B2680 45.730 163.650 111.530 1.00 45.41 O
ATOM 4 OP2 A B2680 45.598 161.379 112.714 1.00 43.45 O
ATOM 5 O5' A B2680 45.265 161.512 110.261 1.00 45.47 O
ATOM 6 C5' A B2680 45.317 162.113 108.948 1.00 43.94 C
ATOM 7 C4' A B2680 44.223 161.539 108.066 1.00 44.66 C
ATOM 8 O4' A B2680 44.429 160.114 107.888 1.00 45.17 O
ATOM 9 C3' A B2680 42.812 161.644 108.618 1.00 44.65 C
ATOM 10 O3' A B2680 42.256 162.906 108.295 1.00 45.78 O
ATOM 11 C2' A B2680 42.095 160.514 107.891 1.00 44.65 C
ATOM 12 O2' A B2680 41.792 160.831 106.550 1.00 45.15 O
ATOM 13 C1' A B2680 43.181 159.444 107.860 1.00 43.93 C
ATOM 14 N9 A B2680 43.145 158.513 108.986 1.00 43.73 N
ATOM 15 C8 A B2680 43.873 158.579 110.146 1.00 44.16 C
ATOM 16 N7 A B2680 43.686 157.559 110.944 1.00 44.87 N
ATOM 17 C5 A B2680 42.763 156.777 110.273 1.00 42.74 C
ATOM 18 C6 A B2680 42.173 155.552 110.585 1.00 43.77 C
ATOM 19 N6 A B2680 42.441 154.866 111.698 1.00 42.63 N
ATOM 20 N1 A B2680 41.288 155.042 109.704 1.00 44.42 N
ATOM 21 C2 A B2680 41.025 155.730 108.591 1.00 42.87 C
ATOM 22 N3 A B2680 41.521 156.889 108.185 1.00 43.00 N
ATOM 23 C4 A B2680 42.400 157.364 109.079 1.00 42.74 C
ATOM 24 P G B2681 41.468 163.748 109.408 1.00 47.87 P
ATOM 25 OP1 G B2681 40.672 164.695 108.601 1.00 50.05 O
ATOM 26 OP2 G B2681 42.425 164.273 110.420 1.00 46.28 O
ATOM 27 O5' G B2681 40.483 162.701 110.117 1.00 46.85 O
TER
ATOM 2 P G A2498 43.180 151.341 119.858 1.00 40.56 P
ATOM 3 OP1 G A2498 42.938 152.357 120.901 1.00 37.03 O
ATOM 4 OP2 G A2498 42.394 150.072 119.863 1.00 36.28 O
ATOM 5 O5' G A2498 43.055 152.066 118.447 1.00 39.00 O
ATOM 6 C5' G A2498 43.892 153.188 118.153 1.00 41.99 C
ATOM 7 C4' G A2498 43.519 153.801 116.833 1.00 42.88 C
ATOM 8 O4' G A2498 43.888 152.917 115.742 1.00 42.67 O
ATOM 9 C3' G A2498 42.043 154.044 116.592 1.00 44.20 C
ATOM 10 O3' G A2498 41.529 155.158 117.327 1.00 47.76 O
ATOM 11 C2' G A2498 42.035 154.229 115.081 1.00 43.31 C
ATOM 12 O2' G A2498 42.566 155.480 114.688 1.00 39.88 O
ATOM 13 C1' G A2498 42.991 153.109 114.654 1.00 42.14 C
ATOM 14 N9 G A2498 42.270 151.857 114.422 1.00 41.37 N
ATOM 15 C8 G A2498 42.232 150.764 115.248 1.00 42.11 C
ATOM 16 N7 G A2498 41.459 149.812 114.805 1.00 41.34 N
ATOM 17 C5 G A2498 40.963 150.301 113.608 1.00 41.26 C
ATOM 18 C6 G A2498 40.064 149.718 112.687 1.00 41.78 C
ATOM 19 O6 G A2498 39.493 148.623 112.755 1.00 43.84 O
ATOM 20 N1 G A2498 39.837 150.549 111.599 1.00 39.91 N
ATOM 21 C2 G A2498 40.392 151.782 111.426 1.00 41.99 C
ATOM 22 N2 G A2498 40.054 152.424 110.310 1.00 42.78 N
ATOM 23 N3 G A2498 41.222 152.347 112.285 1.00 43.50 N
ATOM 24 C4 G A2498 41.464 151.554 113.347 1.00 41.56 C
ATOM 25 P G A2499 39.934 155.352 117.486 1.00 46.61 P
ATOM 26 OP1 G A2499 39.754 156.499 118.414 1.00 45.66 O
ATOM 27 OP2 G A2499 39.283 154.048 117.792 1.00 44.06 O
ATOM 28 O5' G A2499 39.492 155.824 116.028 1.00 47.26 O
TER
ATOM 1 O3' A B2679 47.551 161.980 111.264 1.00 43.73 O
ATOM 2 P A B2680 45.976 162.183 111.526 1.00 45.55 P
ATOM 3 OP1 A B2680 45.730 163.650 111.530 1.00 45.41 O
ATOM 4 OP2 A B2680 45.598 161.379 112.714 1.00 43.45 O
ATOM 5 O5' A B2680 45.265 161.512 110.261 1.00 45.47 O
ATOM 6 C5' A B2680 45.317 162.113 108.948 1.00 43.94 C
ATOM 7 C4' A B2680 44.223 161.539 108.066 1.00 44.66 C
ATOM 8 O4' A B2680 44.429 160.114 107.888 1.00 45.17 O
ATOM 9 C3' A B2680 42.812 161.644 108.618 1.00 44.65 C
ATOM 10 O3' A B2680 42.256 162.906 108.295 1.00 45.78 O
ATOM 11 C2' A B2680 42.095 160.514 107.891 1.00 44.65 C
ATOM 12 O2' A B2680 41.792 160.831 106.550 1.00 45.15 O
ATOM 13 C1' A B2680 43.181 159.444 107.860 1.00 43.93 C
ATOM 14 N9 A B2680 43.145 158.513 108.986 1.00 43.73 N
ATOM 15 C8 A B2680 43.873 158.579 110.146 1.00 44.16 C
ATOM 16 N7 A B2680 43.686 157.559 110.944 1.00 44.87 N
ATOM 17 C5 A B2680 42.763 156.777 110.273 1.00 42.74 C
ATOM 18 C6 A B2680 42.173 155.552 110.585 1.00 43.77 C
ATOM 19 N6 A B2680 42.441 154.866 111.698 1.00 42.63 N
ATOM 20 N1 A B2680 41.288 155.042 109.704 1.00 44.42 N
ATOM 21 C2 A B2680 41.025 155.730 108.591 1.00 42.87 C
ATOM 22 N3 A B2680 41.521 156.889 108.185 1.00 43.00 N
ATOM 23 C4 A B2680 42.400 157.364 109.079 1.00 42.74 C
ATOM 24 P G B2681 41.468 163.748 109.408 1.00 47.87 P
ATOM 25 OP1 G B2681 40.672 164.695 108.601 1.00 50.05 O
ATOM 26 OP2 G B2681 42.425 164.273 110.420 1.00 46.28 O
ATOM 27 O5' G B2681 40.483 162.701 110.117 1.00 46.85 O
TER
Atoms:
OP1: (42.938,152.357,120.901)
OP2: (42.394,150.072,119.863)
C3': (42.043,154.044,116.592)
C1': (42.991,153.109,114.654)
C5': (43.892,153.188,118.153)
O6: (39.493,148.623,112.755)
O4': (43.888,152.917,115.742)
C8: (42.232,150.764,115.248)
C2: (40.392,151.782,111.426)
C6: (40.064,149.718,112.687)
C5: (40.963,150.301,113.608)
C4: (41.464,151.554,113.347)
P: (43.180,151.341,119.858)
C4': (43.519,153.801,116.833)
C2': (42.035,154.229,115.081)
O2': (42.566,155.480,114.688)
N1: (39.837,150.549,111.599)
N2: (40.054,152.424,110.310)
N3: (41.222,152.347,112.285)
N7: (41.459,149.812,114.805)
N9: (42.270,151.857,114.422)
O5': (43.055,152.066,118.447)
O3': (41.529,155.158,117.327)
OP2: (42.394,150.072,119.863)
C3': (42.043,154.044,116.592)
C1': (42.991,153.109,114.654)
C5': (43.892,153.188,118.153)
O6: (39.493,148.623,112.755)
O4': (43.888,152.917,115.742)
C8: (42.232,150.764,115.248)
C2: (40.392,151.782,111.426)
C6: (40.064,149.718,112.687)
C5: (40.963,150.301,113.608)
C4: (41.464,151.554,113.347)
P: (43.180,151.341,119.858)
C4': (43.519,153.801,116.833)
C2': (42.035,154.229,115.081)
O2': (42.566,155.480,114.688)
N1: (39.837,150.549,111.599)
N2: (40.054,152.424,110.310)
N3: (41.222,152.347,112.285)
N7: (41.459,149.812,114.805)
N9: (42.270,151.857,114.422)
O5': (43.055,152.066,118.447)
O3': (41.529,155.158,117.327)
OP1: (45.730,163.650,111.530)
OP2: (45.598,161.379,112.714)
C3': (42.812,161.644,108.618)
C1': (43.181,159.444,107.860)
C5': (45.317,162.113,108.948)
O4': (44.429,160.114,107.888)
C8: (43.873,158.579,110.146)
O2': (41.792,160.831,106.550)
C6: (42.173,155.552,110.585)
C5: (42.763,156.777,110.273)
C4: (42.400,157.364,109.079)
P: (45.976,162.183,111.526)
C4': (44.223,161.539,108.066)
C2': (42.095,160.514,107.891)
C2: (41.025,155.730,108.591)
N1: (41.288,155.042,109.704)
N3: (41.521,156.889,108.185)
N6: (42.441,154.866,111.698)
N7: (43.686,157.559,110.944)
N9: (43.145,158.513,108.986)
O5': (45.265,161.512,110.261)
O3': (42.256,162.906,108.295)
OP2: (45.598,161.379,112.714)
C3': (42.812,161.644,108.618)
C1': (43.181,159.444,107.860)
C5': (45.317,162.113,108.948)
O4': (44.429,160.114,107.888)
C8: (43.873,158.579,110.146)
O2': (41.792,160.831,106.550)
C6: (42.173,155.552,110.585)
C5: (42.763,156.777,110.273)
C4: (42.400,157.364,109.079)
P: (45.976,162.183,111.526)
C4': (44.223,161.539,108.066)
C2': (42.095,160.514,107.891)
C2: (41.025,155.730,108.591)
N1: (41.288,155.042,109.704)
N3: (41.521,156.889,108.185)
N6: (42.441,154.866,111.698)
N7: (43.686,157.559,110.944)
N9: (43.145,158.513,108.986)
O5': (45.265,161.512,110.261)
O3': (42.256,162.906,108.295)
Image (generated by PyMOL):