Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A66:A22
Extra
PDB:
ATOM 1 O3' C A 65 10.742 8.424 10.997 1.00 24.51 O
ATOM 2 P G A 66 11.093 7.029 11.711 1.00 31.45 P
ATOM 3 OP1 G A 66 12.497 7.123 12.176 1.00 32.97 O
ATOM 4 OP2 G A 66 10.726 5.946 10.766 1.00 32.53 O
ATOM 5 O5' G A 66 10.107 7.010 12.958 1.00 28.74 O
ATOM 6 C5' G A 66 10.281 7.906 14.051 1.00 28.20 C
ATOM 7 C4' G A 66 9.478 7.468 15.250 1.00 29.42 C
ATOM 8 O4' G A 66 8.083 7.334 14.858 1.00 28.97 O
ATOM 9 C3' G A 66 9.881 6.116 15.835 1.00 30.89 C
ATOM 10 O3' G A 66 9.613 6.107 17.238 1.00 29.65 O
ATOM 11 C2' G A 66 8.925 5.159 15.132 1.00 29.36 C
ATOM 12 O2' G A 66 8.707 3.941 15.812 1.00 28.56 O
ATOM 13 C1' G A 66 7.654 6.001 15.058 1.00 26.99 C
ATOM 14 N9 G A 66 6.763 5.634 13.955 1.00 25.47 N
ATOM 15 C8 G A 66 7.034 5.674 12.606 1.00 24.11 C
ATOM 16 N7 G A 66 6.030 5.274 11.875 1.00 23.15 N
ATOM 17 C5 G A 66 5.043 4.945 12.796 1.00 22.30 C
ATOM 18 C6 G A 66 3.727 4.449 12.609 1.00 22.72 C
ATOM 19 O6 G A 66 3.147 4.186 11.550 1.00 23.53 O
ATOM 20 N1 G A 66 3.069 4.262 13.819 1.00 21.08 N
ATOM 21 C2 G A 66 3.607 4.511 15.055 1.00 24.81 C
ATOM 22 N2 G A 66 2.818 4.258 16.111 1.00 27.14 N
ATOM 23 N3 G A 66 4.832 4.965 15.246 1.00 25.79 N
ATOM 24 C4 G A 66 5.484 5.161 14.082 1.00 24.25 C
ATOM 25 P G A 67 10.770 6.471 18.295 1.00 29.82 P
ATOM 26 OP1 G A 67 10.166 6.380 19.647 1.00 28.11 O
ATOM 27 OP2 G A 67 11.369 7.760 17.867 1.00 31.45 O
ATOM 28 O5' G A 67 11.822 5.298 18.091 1.00 35.11 O
TER
ATOM 1 O3' A B 21 1.951 9.755 24.154 1.00 38.44 O
ATOM 2 P A B 22 2.295 9.530 25.710 1.00 46.27 P
ATOM 3 OP1 A B 22 1.308 10.315 26.492 1.00 45.74 O
ATOM 4 OP2 A B 22 3.740 9.818 25.889 1.00 43.98 O
ATOM 5 O5' A B 22 2.027 7.969 25.902 1.00 44.56 O
ATOM 6 C5' A B 22 0.751 7.495 26.297 1.00 43.07 C
ATOM 7 C4' A B 22 0.158 6.549 25.278 1.00 37.02 C
ATOM 8 O4' A B 22 0.148 7.169 23.963 1.00 35.11 O
ATOM 9 C3' A B 22 0.904 5.247 25.043 1.00 33.12 C
ATOM 10 O3' A B 22 0.695 4.286 26.061 1.00 31.52 O
ATOM 11 C2' A B 22 0.366 4.821 23.688 1.00 33.48 C
ATOM 12 O2' A B 22 -0.953 4.310 23.812 1.00 35.88 O
ATOM 13 C1' A B 22 0.294 6.168 22.971 1.00 33.90 C
ATOM 14 N9 A B 22 1.522 6.436 22.202 1.00 29.91 N
ATOM 15 C8 A B 22 2.537 7.317 22.475 1.00 30.97 C
ATOM 16 N7 A B 22 3.498 7.295 21.581 1.00 30.97 N
ATOM 17 C5 A B 22 3.089 6.335 20.666 1.00 28.77 C
ATOM 18 C6 A B 22 3.665 5.840 19.483 1.00 28.01 C
ATOM 19 N6 A B 22 4.831 6.267 18.990 1.00 28.94 N
ATOM 20 N1 A B 22 2.992 4.881 18.808 1.00 25.55 N
ATOM 21 C2 A B 22 1.821 4.457 19.298 1.00 25.13 C
ATOM 22 N3 A B 22 1.178 4.842 20.396 1.00 26.31 N
ATOM 23 C4 A B 22 1.874 5.797 21.040 1.00 29.02 C
ATOM 24 P G B 23 1.936 3.447 26.636 1.00 35.27 P
ATOM 25 OP1 G B 23 1.377 2.426 27.559 1.00 39.41 O
ATOM 26 OP2 G B 23 2.915 4.425 27.164 1.00 36.58 O
ATOM 27 O5' G B 23 2.525 2.740 25.336 1.00 32.53 O
TER
ATOM 2 P G A 66 11.093 7.029 11.711 1.00 31.45 P
ATOM 3 OP1 G A 66 12.497 7.123 12.176 1.00 32.97 O
ATOM 4 OP2 G A 66 10.726 5.946 10.766 1.00 32.53 O
ATOM 5 O5' G A 66 10.107 7.010 12.958 1.00 28.74 O
ATOM 6 C5' G A 66 10.281 7.906 14.051 1.00 28.20 C
ATOM 7 C4' G A 66 9.478 7.468 15.250 1.00 29.42 C
ATOM 8 O4' G A 66 8.083 7.334 14.858 1.00 28.97 O
ATOM 9 C3' G A 66 9.881 6.116 15.835 1.00 30.89 C
ATOM 10 O3' G A 66 9.613 6.107 17.238 1.00 29.65 O
ATOM 11 C2' G A 66 8.925 5.159 15.132 1.00 29.36 C
ATOM 12 O2' G A 66 8.707 3.941 15.812 1.00 28.56 O
ATOM 13 C1' G A 66 7.654 6.001 15.058 1.00 26.99 C
ATOM 14 N9 G A 66 6.763 5.634 13.955 1.00 25.47 N
ATOM 15 C8 G A 66 7.034 5.674 12.606 1.00 24.11 C
ATOM 16 N7 G A 66 6.030 5.274 11.875 1.00 23.15 N
ATOM 17 C5 G A 66 5.043 4.945 12.796 1.00 22.30 C
ATOM 18 C6 G A 66 3.727 4.449 12.609 1.00 22.72 C
ATOM 19 O6 G A 66 3.147 4.186 11.550 1.00 23.53 O
ATOM 20 N1 G A 66 3.069 4.262 13.819 1.00 21.08 N
ATOM 21 C2 G A 66 3.607 4.511 15.055 1.00 24.81 C
ATOM 22 N2 G A 66 2.818 4.258 16.111 1.00 27.14 N
ATOM 23 N3 G A 66 4.832 4.965 15.246 1.00 25.79 N
ATOM 24 C4 G A 66 5.484 5.161 14.082 1.00 24.25 C
ATOM 25 P G A 67 10.770 6.471 18.295 1.00 29.82 P
ATOM 26 OP1 G A 67 10.166 6.380 19.647 1.00 28.11 O
ATOM 27 OP2 G A 67 11.369 7.760 17.867 1.00 31.45 O
ATOM 28 O5' G A 67 11.822 5.298 18.091 1.00 35.11 O
TER
ATOM 1 O3' A B 21 1.951 9.755 24.154 1.00 38.44 O
ATOM 2 P A B 22 2.295 9.530 25.710 1.00 46.27 P
ATOM 3 OP1 A B 22 1.308 10.315 26.492 1.00 45.74 O
ATOM 4 OP2 A B 22 3.740 9.818 25.889 1.00 43.98 O
ATOM 5 O5' A B 22 2.027 7.969 25.902 1.00 44.56 O
ATOM 6 C5' A B 22 0.751 7.495 26.297 1.00 43.07 C
ATOM 7 C4' A B 22 0.158 6.549 25.278 1.00 37.02 C
ATOM 8 O4' A B 22 0.148 7.169 23.963 1.00 35.11 O
ATOM 9 C3' A B 22 0.904 5.247 25.043 1.00 33.12 C
ATOM 10 O3' A B 22 0.695 4.286 26.061 1.00 31.52 O
ATOM 11 C2' A B 22 0.366 4.821 23.688 1.00 33.48 C
ATOM 12 O2' A B 22 -0.953 4.310 23.812 1.00 35.88 O
ATOM 13 C1' A B 22 0.294 6.168 22.971 1.00 33.90 C
ATOM 14 N9 A B 22 1.522 6.436 22.202 1.00 29.91 N
ATOM 15 C8 A B 22 2.537 7.317 22.475 1.00 30.97 C
ATOM 16 N7 A B 22 3.498 7.295 21.581 1.00 30.97 N
ATOM 17 C5 A B 22 3.089 6.335 20.666 1.00 28.77 C
ATOM 18 C6 A B 22 3.665 5.840 19.483 1.00 28.01 C
ATOM 19 N6 A B 22 4.831 6.267 18.990 1.00 28.94 N
ATOM 20 N1 A B 22 2.992 4.881 18.808 1.00 25.55 N
ATOM 21 C2 A B 22 1.821 4.457 19.298 1.00 25.13 C
ATOM 22 N3 A B 22 1.178 4.842 20.396 1.00 26.31 N
ATOM 23 C4 A B 22 1.874 5.797 21.040 1.00 29.02 C
ATOM 24 P G B 23 1.936 3.447 26.636 1.00 35.27 P
ATOM 25 OP1 G B 23 1.377 2.426 27.559 1.00 39.41 O
ATOM 26 OP2 G B 23 2.915 4.425 27.164 1.00 36.58 O
ATOM 27 O5' G B 23 2.525 2.740 25.336 1.00 32.53 O
TER
Atoms:
OP1: (12.497,7.123,12.176)
OP2: (10.726,5.946,10.766)
C3': (9.881,6.116,15.835)
C1': (7.654,6.001,15.058)
C5': (10.281,7.906,14.051)
O6: (3.147,4.186,11.550)
O4': (8.083,7.334,14.858)
C8: (7.034,5.674,12.606)
C2: (3.607,4.511,15.055)
C6: (3.727,4.449,12.609)
C5: (5.043,4.945,12.796)
C4: (5.484,5.161,14.082)
P: (11.093,7.029,11.711)
C4': (9.478,7.468,15.250)
C2': (8.925,5.159,15.132)
O2': (8.707,3.941,15.812)
N1: (3.069,4.262,13.819)
N2: (2.818,4.258,16.111)
N3: (4.832,4.965,15.246)
N7: (6.030,5.274,11.875)
N9: (6.763,5.634,13.955)
O5': (10.107,7.010,12.958)
O3': (9.613,6.107,17.238)
OP2: (10.726,5.946,10.766)
C3': (9.881,6.116,15.835)
C1': (7.654,6.001,15.058)
C5': (10.281,7.906,14.051)
O6: (3.147,4.186,11.550)
O4': (8.083,7.334,14.858)
C8: (7.034,5.674,12.606)
C2: (3.607,4.511,15.055)
C6: (3.727,4.449,12.609)
C5: (5.043,4.945,12.796)
C4: (5.484,5.161,14.082)
P: (11.093,7.029,11.711)
C4': (9.478,7.468,15.250)
C2': (8.925,5.159,15.132)
O2': (8.707,3.941,15.812)
N1: (3.069,4.262,13.819)
N2: (2.818,4.258,16.111)
N3: (4.832,4.965,15.246)
N7: (6.030,5.274,11.875)
N9: (6.763,5.634,13.955)
O5': (10.107,7.010,12.958)
O3': (9.613,6.107,17.238)
OP1: (1.308,10.315,26.492)
OP2: (3.740,9.818,25.889)
C3': (0.904,5.247,25.043)
C1': (0.294,6.168,22.971)
C5': (0.751,7.495,26.297)
O4': (0.148,7.169,23.963)
C8: (2.537,7.317,22.475)
O2': (-0.953,4.310,23.812)
C6: (3.665,5.840,19.483)
C5: (3.089,6.335,20.666)
C4: (1.874,5.797,21.040)
P: (2.295,9.530,25.710)
C4': (0.158,6.549,25.278)
C2': (0.366,4.821,23.688)
C2: (1.821,4.457,19.298)
N1: (2.992,4.881,18.808)
N3: (1.178,4.842,20.396)
N6: (4.831,6.267,18.990)
N7: (3.498,7.295,21.581)
N9: (1.522,6.436,22.202)
O5': (2.027,7.969,25.902)
O3': (0.695,4.286,26.061)
OP2: (3.740,9.818,25.889)
C3': (0.904,5.247,25.043)
C1': (0.294,6.168,22.971)
C5': (0.751,7.495,26.297)
O4': (0.148,7.169,23.963)
C8: (2.537,7.317,22.475)
O2': (-0.953,4.310,23.812)
C6: (3.665,5.840,19.483)
C5: (3.089,6.335,20.666)
C4: (1.874,5.797,21.040)
P: (2.295,9.530,25.710)
C4': (0.158,6.549,25.278)
C2': (0.366,4.821,23.688)
C2: (1.821,4.457,19.298)
N1: (2.992,4.881,18.808)
N3: (1.178,4.842,20.396)
N6: (4.831,6.267,18.990)
N7: (3.498,7.295,21.581)
N9: (1.522,6.436,22.202)
O5': (2.027,7.969,25.902)
O3': (0.695,4.286,26.061)
Image (generated by PyMOL):