ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:C4:C32

Extra

PDB:
ATOM 1 O3' A A 3 -30.442 36.545 -8.810 1.00 84.59 O
ATOM 2 P G A 4 -30.433 36.450 -7.213 1.00105.65 P
ATOM 3 OP1 G A 4 -31.834 36.322 -6.753 1.00 95.61 O
ATOM 4 OP2 G A 4 -29.581 37.547 -6.700 1.00 90.43 O
ATOM 5 O5' G A 4 -29.696 35.056 -6.942 1.00 89.12 O
ATOM 6 C5' G A 4 -30.268 33.842 -7.408 1.00 81.26 C
ATOM 7 C4' G A 4 -29.321 32.683 -7.158 1.00 90.61 C
ATOM 8 O4' G A 4 -28.174 32.767 -8.042 1.00 87.36 O
ATOM 9 C3' G A 4 -28.715 32.651 -5.764 1.00 87.50 C
ATOM 10 O3' G A 4 -29.611 32.039 -4.852 1.00 84.66 O
ATOM 11 C2' G A 4 -27.477 31.795 -6.001 1.00 90.94 C
ATOM 12 O2' G A 4 -27.776 30.414 -6.077 1.00 96.05 O
ATOM 13 C1' G A 4 -27.018 32.311 -7.361 1.00 87.07 C
ATOM 14 N9 G A 4 -26.069 33.415 -7.254 1.00 90.86 N
ATOM 15 C8 G A 4 -26.346 34.759 -7.332 1.00 90.76 C
ATOM 16 N7 G A 4 -25.292 35.517 -7.198 1.00 86.27 N
ATOM 17 C5 G A 4 -24.248 34.618 -7.018 1.00 89.74 C
ATOM 18 C6 G A 4 -22.866 34.854 -6.820 1.00 88.74 C
ATOM 19 O6 G A 4 -22.273 35.942 -6.764 1.00 80.32 O
ATOM 20 N1 G A 4 -22.156 33.662 -6.681 1.00 84.98 N
ATOM 21 C2 G A 4 -22.712 32.405 -6.727 1.00 86.70 C
ATOM 22 N2 G A 4 -21.866 31.377 -6.572 1.00 92.38 N
ATOM 23 N3 G A 4 -24.006 32.170 -6.911 1.00 84.43 N
ATOM 24 C4 G A 4 -24.711 33.319 -7.048 1.00 89.19 C
ATOM 25 P U A 5 -29.710 32.603 -3.360 1.00100.26 P
ATOM 26 OP1 U A 5 -30.766 31.842 -2.654 1.00 85.62 O
ATOM 27 OP2 U A 5 -29.781 34.080 -3.434 1.00 93.17 O
ATOM 28 O5' U A 5 -28.297 32.184 -2.741 1.00 84.79 O
TER

ATOM 1 O3' A B 31 -28.120 22.216 -9.688 1.00145.39 O
ATOM 2 P A B 32 -28.031 22.187 -8.091 1.00154.42 P
ATOM 3 OP1 A B 32 -28.678 20.942 -7.620 1.00141.93 O
ATOM 4 OP2 A B 32 -28.500 23.497 -7.584 1.00131.99 O
ATOM 5 O5' A B 32 -26.455 22.061 -7.833 1.00141.47 O
ATOM 6 C5' A B 32 -25.699 21.051 -8.496 1.00129.44 C
ATOM 7 C4' A B 32 -24.220 21.395 -8.498 1.00131.17 C
ATOM 8 O4' A B 32 -24.009 22.616 -9.251 1.00132.60 O
ATOM 9 C3' A B 32 -23.620 21.669 -7.125 1.00132.18 C
ATOM 10 O3' A B 32 -23.143 20.461 -6.551 1.00136.27 O
ATOM 11 C2' A B 32 -22.466 22.608 -7.457 1.00127.94 C
ATOM 12 O2' A B 32 -21.310 21.910 -7.876 1.00126.61 O
ATOM 13 C1' A B 32 -23.036 23.422 -8.613 1.00123.78 C
ATOM 14 N9 A B 32 -23.663 24.674 -8.197 1.00120.80 N
ATOM 15 C8 A B 32 -24.992 24.897 -7.961 1.00122.22 C
ATOM 16 N7 A B 32 -25.268 26.128 -7.598 1.00115.63 N
ATOM 17 C5 A B 32 -24.033 26.757 -7.597 1.00114.93 C
ATOM 18 C6 A B 32 -23.640 28.077 -7.301 1.00106.09 C
ATOM 19 N6 A B 32 -24.499 29.034 -6.934 1.00 99.98 N
ATOM 20 N1 A B 32 -22.327 28.374 -7.397 1.00100.10 N
ATOM 21 C2 A B 32 -21.472 27.413 -7.765 1.00100.99 C
ATOM 22 N3 A B 32 -21.721 26.140 -8.068 1.00108.67 N
ATOM 23 C4 A B 32 -23.033 25.875 -7.963 1.00116.61 C
ATOM 24 P A B 33 -23.387 20.167 -4.998 1.00144.80 P
ATOM 25 OP1 A B 33 -22.844 18.823 -4.699 1.00148.19 O
ATOM 26 OP2 A B 33 -24.803 20.478 -4.697 1.00134.83 O
ATOM 27 O5' A B 33 -22.478 21.265 -4.273 1.00134.38 O
TER

Atoms:
OP1: (-31.834,36.322,-6.753)
OP2: (-29.581,37.547,-6.700)
C3': (-28.715,32.651,-5.764)
C1': (-27.018,32.311,-7.361)
C5': (-30.268,33.842,-7.408)
O6: (-22.273,35.942,-6.764)
O4': (-28.174,32.767,-8.042)
C8: (-26.346,34.759,-7.332)
C2: (-22.712,32.405,-6.727)
C6: (-22.866,34.854,-6.820)
C5: (-24.248,34.618,-7.018)
C4: (-24.711,33.319,-7.048)
P: (-30.433,36.450,-7.213)
C4': (-29.321,32.683,-7.158)
C2': (-27.477,31.795,-6.001)
O2': (-27.776,30.414,-6.077)
N1: (-22.156,33.662,-6.681)
N2: (-21.866,31.377,-6.572)
N3: (-24.006,32.170,-6.911)
N7: (-25.292,35.517,-7.198)
N9: (-26.069,33.415,-7.254)
O5': (-29.696,35.056,-6.942)
O3': (-29.611,32.039,-4.852)
OP1: (-28.678,20.942,-7.620)
OP2: (-28.500,23.497,-7.584)
C3': (-23.620,21.669,-7.125)
C1': (-23.036,23.422,-8.613)
C5': (-25.699,21.051,-8.496)
O4': (-24.009,22.616,-9.251)
C8: (-24.992,24.897,-7.961)
O2': (-21.310,21.910,-7.876)
C6: (-23.640,28.077,-7.301)
C5: (-24.033,26.757,-7.597)
C4: (-23.033,25.875,-7.963)
P: (-28.031,22.187,-8.091)
C4': (-24.220,21.395,-8.498)
C2': (-22.466,22.608,-7.457)
C2: (-21.472,27.413,-7.765)
N1: (-22.327,28.374,-7.397)
N3: (-21.721,26.140,-8.068)
N6: (-24.499,29.034,-6.934)
N7: (-25.268,26.128,-7.598)
N9: (-23.663,24.674,-8.197)
O5': (-26.455,22.061,-7.833)
O3': (-23.143,20.461,-6.551)
Image (generated by PyMOL):
PyMOL image
show in jmol