Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:02016:0617
Extra
PDB:
ATOM 1 O3' U A2015 42.258 107.559 109.897 1.00 40.86 O
ATOM 2 P G A2016 43.485 106.838 109.158 1.00 42.28 P
ATOM 3 OP1 G A2016 43.100 105.414 108.974 1.00 40.56 O
ATOM 4 OP2 G A2016 44.741 107.167 109.879 1.00 45.88 O
ATOM 5 O5' G A2016 43.529 107.546 107.724 1.00 44.37 O
ATOM 6 C5' G A2016 42.438 107.407 106.790 1.00 41.11 C
ATOM 7 C4' G A2016 42.573 108.414 105.667 1.00 42.87 C
ATOM 8 O4' G A2016 42.466 109.764 106.190 1.00 41.54 O
ATOM 9 C3' G A2016 43.902 108.398 104.936 1.00 42.26 C
ATOM 10 O3' G A2016 43.892 107.372 103.951 1.00 44.85 O
ATOM 11 C2' G A2016 43.971 109.804 104.345 1.00 41.12 C
ATOM 12 O2' G A2016 43.214 109.992 103.174 1.00 42.27 O
ATOM 13 C1' G A2016 43.306 110.632 105.444 1.00 41.48 C
ATOM 14 N9 G A2016 44.283 111.244 106.340 1.00 41.20 N
ATOM 15 C8 G A2016 44.818 110.707 107.485 1.00 39.65 C
ATOM 16 N7 G A2016 45.708 111.479 108.044 1.00 40.23 N
ATOM 17 C5 G A2016 45.759 112.596 107.225 1.00 40.15 C
ATOM 18 C6 G A2016 46.551 113.761 107.318 1.00 40.58 C
ATOM 19 O6 G A2016 47.397 114.046 108.167 1.00 42.74 O
ATOM 20 N1 G A2016 46.280 114.647 106.281 1.00 40.03 N
ATOM 21 C2 G A2016 45.366 114.435 105.282 1.00 39.52 C
ATOM 22 N2 G A2016 45.229 115.415 104.388 1.00 36.78 N
ATOM 23 N3 G A2016 44.634 113.344 105.175 1.00 39.46 N
ATOM 24 C4 G A2016 44.878 112.473 106.176 1.00 40.31 C
ATOM 25 P C A2017 45.172 106.413 103.771 1.00 48.59 P
ATOM 26 OP1 C A2017 44.744 105.389 102.800 1.00 44.77 O
ATOM 27 OP2 C A2017 45.677 105.983 105.111 1.00 47.29 O
ATOM 28 O5' C A2017 46.264 107.365 103.098 1.00 47.92 O
TER
ATOM 1 P A B 617 39.261 111.785 95.453 1.00 37.66 P
ATOM 2 OP1 A B 617 39.120 110.601 96.332 1.00 37.87 O
ATOM 3 OP2 A B 617 38.530 111.827 94.164 1.00 39.14 O
ATOM 4 O5' A B 617 38.919 113.096 96.296 1.00 36.79 O
ATOM 5 C5' A B 617 38.405 114.293 95.662 1.00 36.43 C
ATOM 6 C4' A B 617 38.997 115.537 96.308 1.00 37.49 C
ATOM 7 O4' A B 617 38.671 115.542 97.727 1.00 39.14 O
ATOM 8 C3' A B 617 40.517 115.680 96.267 1.00 38.81 C
ATOM 9 O3' A B 617 40.979 116.307 95.068 1.00 36.78 O
ATOM 10 C2' A B 617 40.795 116.581 97.462 1.00 37.90 C
ATOM 11 O2' A B 617 40.552 117.940 97.166 1.00 37.80 O
ATOM 12 C1' A B 617 39.756 116.085 98.471 1.00 39.37 C
ATOM 13 N9 A B 617 40.273 115.051 99.378 1.00 40.17 N
ATOM 14 C8 A B 617 39.877 113.736 99.458 1.00 41.01 C
ATOM 15 N7 A B 617 40.520 113.044 100.364 1.00 42.36 N
ATOM 16 C5 A B 617 41.398 113.959 100.924 1.00 41.64 C
ATOM 17 C6 A B 617 42.357 113.841 101.947 1.00 42.75 C
ATOM 18 N6 A B 617 42.580 112.712 102.625 1.00 42.55 N
ATOM 19 N1 A B 617 43.081 114.937 102.256 1.00 39.11 N
ATOM 20 C2 A B 617 42.835 116.073 101.591 1.00 39.64 C
ATOM 21 N3 A B 617 41.953 116.313 100.623 1.00 39.13 N
ATOM 22 C4 A B 617 41.260 115.200 100.327 1.00 40.21 C
ATOM 23 P A B 618 42.309 115.777 94.341 1.00 40.24 P
ATOM 24 OP1 A B 618 42.418 116.573 93.105 1.00 45.60 O
ATOM 25 OP2 A B 618 42.294 114.296 94.254 1.00 43.65 O
ATOM 26 O5' A B 618 43.537 116.113 95.306 1.00 43.90 O
TER
ATOM 2 P G A2016 43.485 106.838 109.158 1.00 42.28 P
ATOM 3 OP1 G A2016 43.100 105.414 108.974 1.00 40.56 O
ATOM 4 OP2 G A2016 44.741 107.167 109.879 1.00 45.88 O
ATOM 5 O5' G A2016 43.529 107.546 107.724 1.00 44.37 O
ATOM 6 C5' G A2016 42.438 107.407 106.790 1.00 41.11 C
ATOM 7 C4' G A2016 42.573 108.414 105.667 1.00 42.87 C
ATOM 8 O4' G A2016 42.466 109.764 106.190 1.00 41.54 O
ATOM 9 C3' G A2016 43.902 108.398 104.936 1.00 42.26 C
ATOM 10 O3' G A2016 43.892 107.372 103.951 1.00 44.85 O
ATOM 11 C2' G A2016 43.971 109.804 104.345 1.00 41.12 C
ATOM 12 O2' G A2016 43.214 109.992 103.174 1.00 42.27 O
ATOM 13 C1' G A2016 43.306 110.632 105.444 1.00 41.48 C
ATOM 14 N9 G A2016 44.283 111.244 106.340 1.00 41.20 N
ATOM 15 C8 G A2016 44.818 110.707 107.485 1.00 39.65 C
ATOM 16 N7 G A2016 45.708 111.479 108.044 1.00 40.23 N
ATOM 17 C5 G A2016 45.759 112.596 107.225 1.00 40.15 C
ATOM 18 C6 G A2016 46.551 113.761 107.318 1.00 40.58 C
ATOM 19 O6 G A2016 47.397 114.046 108.167 1.00 42.74 O
ATOM 20 N1 G A2016 46.280 114.647 106.281 1.00 40.03 N
ATOM 21 C2 G A2016 45.366 114.435 105.282 1.00 39.52 C
ATOM 22 N2 G A2016 45.229 115.415 104.388 1.00 36.78 N
ATOM 23 N3 G A2016 44.634 113.344 105.175 1.00 39.46 N
ATOM 24 C4 G A2016 44.878 112.473 106.176 1.00 40.31 C
ATOM 25 P C A2017 45.172 106.413 103.771 1.00 48.59 P
ATOM 26 OP1 C A2017 44.744 105.389 102.800 1.00 44.77 O
ATOM 27 OP2 C A2017 45.677 105.983 105.111 1.00 47.29 O
ATOM 28 O5' C A2017 46.264 107.365 103.098 1.00 47.92 O
TER
ATOM 1 P A B 617 39.261 111.785 95.453 1.00 37.66 P
ATOM 2 OP1 A B 617 39.120 110.601 96.332 1.00 37.87 O
ATOM 3 OP2 A B 617 38.530 111.827 94.164 1.00 39.14 O
ATOM 4 O5' A B 617 38.919 113.096 96.296 1.00 36.79 O
ATOM 5 C5' A B 617 38.405 114.293 95.662 1.00 36.43 C
ATOM 6 C4' A B 617 38.997 115.537 96.308 1.00 37.49 C
ATOM 7 O4' A B 617 38.671 115.542 97.727 1.00 39.14 O
ATOM 8 C3' A B 617 40.517 115.680 96.267 1.00 38.81 C
ATOM 9 O3' A B 617 40.979 116.307 95.068 1.00 36.78 O
ATOM 10 C2' A B 617 40.795 116.581 97.462 1.00 37.90 C
ATOM 11 O2' A B 617 40.552 117.940 97.166 1.00 37.80 O
ATOM 12 C1' A B 617 39.756 116.085 98.471 1.00 39.37 C
ATOM 13 N9 A B 617 40.273 115.051 99.378 1.00 40.17 N
ATOM 14 C8 A B 617 39.877 113.736 99.458 1.00 41.01 C
ATOM 15 N7 A B 617 40.520 113.044 100.364 1.00 42.36 N
ATOM 16 C5 A B 617 41.398 113.959 100.924 1.00 41.64 C
ATOM 17 C6 A B 617 42.357 113.841 101.947 1.00 42.75 C
ATOM 18 N6 A B 617 42.580 112.712 102.625 1.00 42.55 N
ATOM 19 N1 A B 617 43.081 114.937 102.256 1.00 39.11 N
ATOM 20 C2 A B 617 42.835 116.073 101.591 1.00 39.64 C
ATOM 21 N3 A B 617 41.953 116.313 100.623 1.00 39.13 N
ATOM 22 C4 A B 617 41.260 115.200 100.327 1.00 40.21 C
ATOM 23 P A B 618 42.309 115.777 94.341 1.00 40.24 P
ATOM 24 OP1 A B 618 42.418 116.573 93.105 1.00 45.60 O
ATOM 25 OP2 A B 618 42.294 114.296 94.254 1.00 43.65 O
ATOM 26 O5' A B 618 43.537 116.113 95.306 1.00 43.90 O
TER
Atoms:
OP1: (43.100,105.414,108.974)
OP2: (44.741,107.167,109.879)
C3': (43.902,108.398,104.936)
C1': (43.306,110.632,105.444)
C5': (42.438,107.407,106.790)
O6: (47.397,114.046,108.167)
O4': (42.466,109.764,106.190)
C8: (44.818,110.707,107.485)
C2: (45.366,114.435,105.282)
C6: (46.551,113.761,107.318)
C5: (45.759,112.596,107.225)
C4: (44.878,112.473,106.176)
P: (43.485,106.838,109.158)
C4': (42.573,108.414,105.667)
C2': (43.971,109.804,104.345)
O2': (43.214,109.992,103.174)
N1: (46.280,114.647,106.281)
N2: (45.229,115.415,104.388)
N3: (44.634,113.344,105.175)
N7: (45.708,111.479,108.044)
N9: (44.283,111.244,106.340)
O5': (43.529,107.546,107.724)
O3': (43.892,107.372,103.951)
OP2: (44.741,107.167,109.879)
C3': (43.902,108.398,104.936)
C1': (43.306,110.632,105.444)
C5': (42.438,107.407,106.790)
O6: (47.397,114.046,108.167)
O4': (42.466,109.764,106.190)
C8: (44.818,110.707,107.485)
C2: (45.366,114.435,105.282)
C6: (46.551,113.761,107.318)
C5: (45.759,112.596,107.225)
C4: (44.878,112.473,106.176)
P: (43.485,106.838,109.158)
C4': (42.573,108.414,105.667)
C2': (43.971,109.804,104.345)
O2': (43.214,109.992,103.174)
N1: (46.280,114.647,106.281)
N2: (45.229,115.415,104.388)
N3: (44.634,113.344,105.175)
N7: (45.708,111.479,108.044)
N9: (44.283,111.244,106.340)
O5': (43.529,107.546,107.724)
O3': (43.892,107.372,103.951)
OP1: (39.120,110.601,96.332)
OP2: (38.530,111.827,94.164)
C3': (40.517,115.680,96.267)
C1': (39.756,116.085,98.471)
C5': (38.405,114.293,95.662)
O4': (38.671,115.542,97.727)
C8: (39.877,113.736,99.458)
O2': (40.552,117.940,97.166)
C6: (42.357,113.841,101.947)
C5: (41.398,113.959,100.924)
C4: (41.260,115.200,100.327)
P: (39.261,111.785,95.453)
C4': (38.997,115.537,96.308)
C2': (40.795,116.581,97.462)
C2: (42.835,116.073,101.591)
N1: (43.081,114.937,102.256)
N3: (41.953,116.313,100.623)
N6: (42.580,112.712,102.625)
N7: (40.520,113.044,100.364)
N9: (40.273,115.051,99.378)
O5': (38.919,113.096,96.296)
O3': (40.979,116.307,95.068)
OP2: (38.530,111.827,94.164)
C3': (40.517,115.680,96.267)
C1': (39.756,116.085,98.471)
C5': (38.405,114.293,95.662)
O4': (38.671,115.542,97.727)
C8: (39.877,113.736,99.458)
O2': (40.552,117.940,97.166)
C6: (42.357,113.841,101.947)
C5: (41.398,113.959,100.924)
C4: (41.260,115.200,100.327)
P: (39.261,111.785,95.453)
C4': (38.997,115.537,96.308)
C2': (40.795,116.581,97.462)
C2: (42.835,116.073,101.591)
N1: (43.081,114.937,102.256)
N3: (41.953,116.313,100.623)
N6: (42.580,112.712,102.625)
N7: (40.520,113.044,100.364)
N9: (40.273,115.051,99.378)
O5': (38.919,113.096,96.296)
O3': (40.979,116.307,95.068)
Image (generated by PyMOL):