ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0440:0448

Extra

PDB:
ATOM 1 O3' C A 439 36.680 126.600 55.663 1.00 36.50 O
ATOM 2 P G A 440 35.239 127.106 56.145 1.00 37.55 P
ATOM 3 OP1 G A 440 35.159 127.003 57.623 1.00 38.06 O
ATOM 4 OP2 G A 440 34.254 126.394 55.300 1.00 37.58 O
ATOM 5 O5' G A 440 35.231 128.647 55.765 1.00 37.45 O
ATOM 6 C5' G A 440 36.233 129.533 56.292 1.00 40.29 C
ATOM 7 C4' G A 440 35.966 130.946 55.847 1.00 41.55 C
ATOM 8 O4' G A 440 36.094 131.013 54.398 1.00 43.30 O
ATOM 9 C3' G A 440 34.577 131.476 56.179 1.00 41.65 C
ATOM 10 O3' G A 440 34.669 132.861 56.443 1.00 40.71 O
ATOM 11 C2' G A 440 33.800 131.219 54.890 1.00 43.02 C
ATOM 12 O2' G A 440 32.700 132.091 54.692 1.00 44.40 O
ATOM 13 C1' G A 440 34.874 131.449 53.828 1.00 42.42 C
ATOM 14 N9 G A 440 34.642 130.675 52.611 1.00 42.73 N
ATOM 15 C8 G A 440 34.356 129.334 52.524 1.00 43.61 C
ATOM 16 N7 G A 440 34.167 128.929 51.298 1.00 43.47 N
ATOM 17 C5 G A 440 34.340 130.070 50.529 1.00 43.40 C
ATOM 18 C6 G A 440 34.244 130.253 49.132 1.00 42.85 C
ATOM 19 O6 G A 440 33.952 129.428 48.272 1.00 44.07 O
ATOM 20 N1 G A 440 34.519 131.563 48.766 1.00 42.81 N
ATOM 21 C2 G A 440 34.827 132.575 49.636 1.00 43.27 C
ATOM 22 N2 G A 440 35.057 133.770 49.093 1.00 43.57 N
ATOM 23 N3 G A 440 34.903 132.424 50.946 1.00 44.53 N
ATOM 24 C4 G A 440 34.650 131.152 51.322 1.00 43.72 C
ATOM 25 P A A 441 34.521 133.394 57.947 1.00 41.43 P
ATOM 26 OP1 A A 441 34.554 132.230 58.874 1.00 42.02 O
ATOM 27 OP2 A A 441 33.363 134.315 57.968 1.00 44.51 O
ATOM 28 O5' A A 441 35.824 134.277 58.169 1.00 40.72 O
TER

ATOM 1 O3' A B 447 45.968 139.162 53.296 1.00 40.13 O
ATOM 2 P A B 448 44.521 138.483 53.246 1.00 43.16 P
ATOM 3 OP1 A B 448 43.898 138.686 54.567 1.00 43.27 O
ATOM 4 OP2 A B 448 44.630 137.110 52.687 1.00 41.84 O
ATOM 5 O5' A B 448 43.714 139.398 52.224 1.00 42.92 O
ATOM 6 C5' A B 448 44.065 139.441 50.828 1.00 42.24 C
ATOM 7 C4' A B 448 42.891 139.932 50.014 1.00 43.35 C
ATOM 8 O4' A B 448 41.865 138.908 49.955 1.00 42.64 O
ATOM 9 C3' A B 448 42.198 141.189 50.529 1.00 43.57 C
ATOM 10 O3' A B 448 41.713 141.921 49.415 1.00 44.45 O
ATOM 11 C2' A B 448 41.026 140.618 51.318 1.00 43.10 C
ATOM 12 O2' A B 448 39.938 141.507 51.435 1.00 42.65 O
ATOM 13 C1' A B 448 40.645 139.425 50.450 1.00 43.07 C
ATOM 14 N9 A B 448 39.968 138.349 51.162 1.00 44.83 N
ATOM 15 C8 A B 448 40.235 137.860 52.412 1.00 46.71 C
ATOM 16 N7 A B 448 39.490 136.841 52.748 1.00 48.91 N
ATOM 17 C5 A B 448 38.669 136.652 51.647 1.00 48.60 C
ATOM 18 C6 A B 448 37.664 135.710 51.366 1.00 49.67 C
ATOM 19 N6 A B 448 37.298 134.742 52.207 1.00 50.19 N
ATOM 20 N1 A B 448 37.042 135.797 50.176 1.00 49.56 N
ATOM 21 C2 A B 448 37.408 136.767 49.334 1.00 49.30 C
ATOM 22 N3 A B 448 38.335 137.706 49.482 1.00 48.98 N
ATOM 23 C4 A B 448 38.940 137.588 50.673 1.00 47.08 C
ATOM 24 P C B 449 42.546 143.172 48.868 1.00 46.49 P
ATOM 25 OP1 C B 449 41.758 143.731 47.739 1.00 48.14 O
ATOM 26 OP2 C B 449 43.953 142.749 48.646 1.00 45.40 O
ATOM 27 O5' C B 449 42.477 144.207 50.070 1.00 46.71 O
TER

Atoms:
OP1: (35.159,127.003,57.623)
OP2: (34.254,126.394,55.300)
C3': (34.577,131.476,56.179)
C1': (34.874,131.449,53.828)
C5': (36.233,129.533,56.292)
O6: (33.952,129.428,48.272)
O4': (36.094,131.013,54.398)
C8: (34.356,129.334,52.524)
C2: (34.827,132.575,49.636)
C6: (34.244,130.253,49.132)
C5: (34.340,130.070,50.529)
C4: (34.650,131.152,51.322)
P: (35.239,127.106,56.145)
C4': (35.966,130.946,55.847)
C2': (33.800,131.219,54.890)
O2': (32.700,132.091,54.692)
N1: (34.519,131.563,48.766)
N2: (35.057,133.770,49.093)
N3: (34.903,132.424,50.946)
N7: (34.167,128.929,51.298)
N9: (34.642,130.675,52.611)
O5': (35.231,128.647,55.765)
O3': (34.669,132.861,56.443)
OP1: (43.898,138.686,54.567)
OP2: (44.630,137.110,52.687)
C3': (42.198,141.189,50.529)
C1': (40.645,139.425,50.450)
C5': (44.065,139.441,50.828)
O4': (41.865,138.908,49.955)
C8: (40.235,137.860,52.412)
O2': (39.938,141.507,51.435)
C6: (37.664,135.710,51.366)
C5: (38.669,136.652,51.647)
C4: (38.940,137.588,50.673)
P: (44.521,138.483,53.246)
C4': (42.891,139.932,50.014)
C2': (41.026,140.618,51.318)
C2: (37.408,136.767,49.334)
N1: (37.042,135.797,50.176)
N3: (38.335,137.706,49.482)
N6: (37.298,134.742,52.207)
N7: (39.490,136.841,52.748)
N9: (39.968,138.349,51.162)
O5': (43.714,139.398,52.224)
O3': (41.713,141.921,49.415)
Image (generated by PyMOL):
PyMOL image
show in jmol