ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1951:A1924

Extra

PDB:
ATOM 1 O3' U A1950 106.720 109.784 111.568 1.00 82.80 O
ATOM 2 P G A1951 105.122 109.653 111.580 1.00 80.96 P
ATOM 3 OP1 G A1951 104.683 108.970 112.820 1.00 81.26 O
ATOM 4 OP2 G A1951 104.723 109.106 110.257 1.00 81.14 O
ATOM 5 O5' G A1951 104.625 111.155 111.748 1.00 77.93 O
ATOM 6 C5' G A1951 105.442 112.248 111.310 1.00 70.67 C
ATOM 7 C4' G A1951 104.804 112.938 110.125 1.00 65.81 C
ATOM 8 O4' G A1951 105.738 113.917 109.631 1.00 63.38 O
ATOM 9 C3' G A1951 104.510 112.005 108.955 1.00 63.46 C
ATOM 10 O3' G A1951 103.463 112.575 108.176 1.00 60.05 O
ATOM 11 C2' G A1951 105.795 112.074 108.142 1.00 63.16 C
ATOM 12 O2' G A1951 105.649 111.837 106.762 1.00 64.06 O
ATOM 13 C1' G A1951 106.265 113.496 108.404 1.00 62.94 C
ATOM 14 N9 G A1951 107.708 113.564 108.518 1.00 62.84 N
ATOM 15 C8 G A1951 108.562 112.631 109.054 1.00 64.01 C
ATOM 16 N7 G A1951 109.810 112.996 109.000 1.00 63.49 N
ATOM 17 C5 G A1951 109.764 114.242 108.398 1.00 62.25 C
ATOM 18 C6 G A1951 110.789 115.130 108.077 1.00 62.49 C
ATOM 19 O6 G A1951 111.993 115.004 108.282 1.00 63.68 O
ATOM 20 N1 G A1951 110.301 116.273 107.451 1.00 61.85 N
ATOM 21 C2 G A1951 108.982 116.521 107.182 1.00 61.60 C
ATOM 22 N2 G A1951 108.700 117.647 106.525 1.00 61.25 N
ATOM 23 N3 G A1951 108.011 115.709 107.516 1.00 62.17 N
ATOM 24 C4 G A1951 108.471 114.594 108.101 1.00 62.26 C
ATOM 25 P C A1952 101.934 112.384 108.600 1.00 60.37 P
ATOM 26 OP1 C A1952 101.284 113.431 107.771 1.00 59.16 O
ATOM 27 OP2 C A1952 101.786 112.429 110.080 1.00 59.95 O
ATOM 28 O5' C A1952 101.516 110.926 108.076 1.00 61.94 O
TER

ATOM 1 O3' U B1923 100.291 121.573 112.204 1.00 52.77 O
ATOM 2 P A B1924 99.897 123.031 111.614 1.00 52.19 P
ATOM 3 OP1 A B1924 100.195 124.077 112.638 1.00 52.69 O
ATOM 4 OP2 A B1924 98.506 122.846 111.158 1.00 52.89 O
ATOM 5 O5' A B1924 100.807 123.219 110.318 1.00 49.69 O
ATOM 6 C5' A B1924 101.928 124.122 110.308 1.00 50.54 C
ATOM 7 C4' A B1924 102.453 124.312 108.890 1.00 52.24 C
ATOM 8 O4' A B1924 103.252 123.167 108.484 1.00 51.54 O
ATOM 9 C3' A B1924 101.404 124.556 107.796 1.00 52.82 C
ATOM 10 O3' A B1924 101.860 125.537 106.834 1.00 52.85 O
ATOM 11 C2' A B1924 101.328 123.191 107.115 1.00 53.11 C
ATOM 12 O2' A B1924 101.011 123.292 105.742 1.00 53.93 O
ATOM 13 C1' A B1924 102.765 122.680 107.268 1.00 51.67 C
ATOM 14 N9 A B1924 102.941 121.226 107.229 1.00 50.53 N
ATOM 15 C8 A B1924 102.027 120.234 107.513 1.00 50.27 C
ATOM 16 N7 A B1924 102.465 119.023 107.266 1.00 50.60 N
ATOM 17 C5 A B1924 103.766 119.224 106.813 1.00 50.89 C
ATOM 18 C6 A B1924 104.770 118.335 106.364 1.00 49.83 C
ATOM 19 N6 A B1924 104.604 117.009 106.267 1.00 49.09 N
ATOM 20 N1 A B1924 105.959 118.866 106.006 1.00 49.33 N
ATOM 21 C2 A B1924 106.124 120.193 106.090 1.00 48.96 C
ATOM 22 N3 A B1924 105.263 121.130 106.478 1.00 49.69 N
ATOM 23 C4 A B1924 104.085 120.576 106.824 1.00 50.81 C
ATOM 24 P G B1925 101.186 127.005 106.770 1.00 51.78 P
ATOM 25 OP1 G B1925 102.217 127.881 106.171 1.00 52.87 O
ATOM 26 OP2 G B1925 100.557 127.388 108.058 1.00 51.36 O
ATOM 27 O5' G B1925 100.009 126.871 105.720 1.00 52.03 O
TER

Atoms:
OP1: (104.683,108.970,112.820)
OP2: (104.723,109.106,110.257)
C3': (104.510,112.005,108.955)
C1': (106.265,113.496,108.404)
C5': (105.442,112.248,111.310)
O6: (111.993,115.004,108.282)
O4': (105.738,113.917,109.631)
C8: (108.562,112.631,109.054)
C2: (108.982,116.521,107.182)
C6: (110.789,115.130,108.077)
C5: (109.764,114.242,108.398)
C4: (108.471,114.594,108.101)
P: (105.122,109.653,111.580)
C4': (104.804,112.938,110.125)
C2': (105.795,112.074,108.142)
O2': (105.649,111.837,106.762)
N1: (110.301,116.273,107.451)
N2: (108.700,117.647,106.525)
N3: (108.011,115.709,107.516)
N7: (109.810,112.996,109.000)
N9: (107.708,113.564,108.518)
O5': (104.625,111.155,111.748)
O3': (103.463,112.575,108.176)
OP1: (100.195,124.077,112.638)
OP2: (98.506,122.846,111.158)
C3': (101.404,124.556,107.796)
C1': (102.765,122.680,107.268)
C5': (101.928,124.122,110.308)
O4': (103.252,123.167,108.484)
C8: (102.027,120.234,107.513)
O2': (101.011,123.292,105.742)
C6: (104.770,118.335,106.364)
C5: (103.766,119.224,106.813)
C4: (104.085,120.576,106.824)
P: (99.897,123.031,111.614)
C4': (102.453,124.312,108.890)
C2': (101.328,123.191,107.115)
C2: (106.124,120.193,106.090)
N1: (105.959,118.866,106.006)
N3: (105.263,121.130,106.478)
N6: (104.604,117.009,106.267)
N7: (102.465,119.023,107.266)
N9: (102.941,121.226,107.229)
O5': (100.807,123.219,110.318)
O3': (101.860,125.537,106.834)
Image (generated by PyMOL):
PyMOL image
show in jmol