Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0945:0948
Extra
PDB:
ATOM 1 O3' A A 944 54.384 63.483 121.227 1.00 51.35 O
ATOM 2 P G A 945 55.678 63.577 122.182 1.00 50.87 P
ATOM 3 OP1 G A 945 55.258 63.168 123.545 1.00 49.84 O
ATOM 4 OP2 G A 945 56.326 64.896 121.985 1.00 51.28 O
ATOM 5 O5' G A 945 56.659 62.474 121.600 1.00 48.75 O
ATOM 6 C5' G A 945 56.218 61.127 121.422 1.00 49.71 C
ATOM 7 C4' G A 945 57.120 60.421 120.448 1.00 50.90 C
ATOM 8 O4' G A 945 57.053 61.099 119.169 1.00 50.64 O
ATOM 9 C3' G A 945 58.598 60.447 120.789 1.00 52.28 C
ATOM 10 O3' G A 945 58.939 59.448 121.744 1.00 55.53 O
ATOM 11 C2' G A 945 59.240 60.218 119.430 1.00 50.57 C
ATOM 12 O2' G A 945 59.197 58.866 119.037 1.00 48.19 O
ATOM 13 C1' G A 945 58.314 61.033 118.528 1.00 50.37 C
ATOM 14 N9 G A 945 58.784 62.395 118.298 1.00 51.26 N
ATOM 15 C8 G A 945 58.418 63.531 118.981 1.00 51.62 C
ATOM 16 N7 G A 945 59.015 64.605 118.544 1.00 51.24 N
ATOM 17 C5 G A 945 59.823 64.150 117.512 1.00 51.13 C
ATOM 18 C6 G A 945 60.700 64.854 116.665 1.00 51.72 C
ATOM 19 O6 G A 945 60.948 66.061 116.652 1.00 54.41 O
ATOM 20 N1 G A 945 61.323 64.009 115.755 1.00 51.38 N
ATOM 21 C2 G A 945 61.123 62.660 115.666 1.00 50.89 C
ATOM 22 N2 G A 945 61.814 62.022 114.715 1.00 49.49 N
ATOM 23 N3 G A 945 60.304 61.988 116.450 1.00 51.57 N
ATOM 24 C4 G A 945 59.691 62.792 117.346 1.00 51.36 C
ATOM 25 P C A 946 60.264 59.619 122.642 1.00 58.07 P
ATOM 26 OP1 C A 946 60.129 58.638 123.744 1.00 58.30 O
ATOM 27 OP2 C A 946 60.509 61.051 122.957 1.00 56.67 O
ATOM 28 O5' C A 946 61.438 59.156 121.678 1.00 59.39 O
TER
ATOM 1 O3' G B 947 64.691 53.069 120.207 1.00 85.78 O
ATOM 2 P A B 948 63.222 52.517 119.821 1.00 82.89 P
ATOM 3 OP1 A B 948 62.205 53.397 120.450 1.00 83.26 O
ATOM 4 OP2 A B 948 63.179 51.059 120.085 1.00 83.92 O
ATOM 5 O5' A B 948 63.139 52.699 118.242 1.00 78.02 O
ATOM 6 C5' A B 948 63.737 51.737 117.353 1.00 69.50 C
ATOM 7 C4' A B 948 64.066 52.381 116.027 1.00 64.24 C
ATOM 8 O4' A B 948 62.847 52.874 115.409 1.00 62.69 O
ATOM 9 C3' A B 948 64.970 53.598 116.102 1.00 60.42 C
ATOM 10 O3' A B 948 66.335 53.211 116.180 1.00 57.61 O
ATOM 11 C2' A B 948 64.622 54.331 114.816 1.00 60.83 C
ATOM 12 O2' A B 948 65.240 53.758 113.683 1.00 59.43 O
ATOM 13 C1' A B 948 63.109 54.097 114.742 1.00 62.00 C
ATOM 14 N9 A B 948 62.314 55.148 115.390 1.00 63.40 N
ATOM 15 C8 A B 948 61.479 55.023 116.478 1.00 62.97 C
ATOM 16 N7 A B 948 60.913 56.147 116.843 1.00 62.54 N
ATOM 17 C5 A B 948 61.402 57.078 115.936 1.00 62.04 C
ATOM 18 C6 A B 948 61.182 58.456 115.786 1.00 61.18 C
ATOM 19 N6 A B 948 60.388 59.173 116.578 1.00 60.93 N
ATOM 20 N1 A B 948 61.816 59.084 114.779 1.00 62.28 N
ATOM 21 C2 A B 948 62.613 58.370 113.979 1.00 62.94 C
ATOM 22 N3 A B 948 62.903 57.075 114.016 1.00 62.65 N
ATOM 23 C4 A B 948 62.259 56.476 115.032 1.00 62.89 C
ATOM 24 P C B 949 67.457 54.302 116.538 1.00 55.82 P
ATOM 25 OP1 C B 949 68.610 53.619 117.169 1.00 56.01 O
ATOM 26 OP2 C B 949 66.802 55.429 117.240 1.00 56.81 O
ATOM 27 O5' C B 949 67.951 54.791 115.111 1.00 56.27 O
TER
ATOM 2 P G A 945 55.678 63.577 122.182 1.00 50.87 P
ATOM 3 OP1 G A 945 55.258 63.168 123.545 1.00 49.84 O
ATOM 4 OP2 G A 945 56.326 64.896 121.985 1.00 51.28 O
ATOM 5 O5' G A 945 56.659 62.474 121.600 1.00 48.75 O
ATOM 6 C5' G A 945 56.218 61.127 121.422 1.00 49.71 C
ATOM 7 C4' G A 945 57.120 60.421 120.448 1.00 50.90 C
ATOM 8 O4' G A 945 57.053 61.099 119.169 1.00 50.64 O
ATOM 9 C3' G A 945 58.598 60.447 120.789 1.00 52.28 C
ATOM 10 O3' G A 945 58.939 59.448 121.744 1.00 55.53 O
ATOM 11 C2' G A 945 59.240 60.218 119.430 1.00 50.57 C
ATOM 12 O2' G A 945 59.197 58.866 119.037 1.00 48.19 O
ATOM 13 C1' G A 945 58.314 61.033 118.528 1.00 50.37 C
ATOM 14 N9 G A 945 58.784 62.395 118.298 1.00 51.26 N
ATOM 15 C8 G A 945 58.418 63.531 118.981 1.00 51.62 C
ATOM 16 N7 G A 945 59.015 64.605 118.544 1.00 51.24 N
ATOM 17 C5 G A 945 59.823 64.150 117.512 1.00 51.13 C
ATOM 18 C6 G A 945 60.700 64.854 116.665 1.00 51.72 C
ATOM 19 O6 G A 945 60.948 66.061 116.652 1.00 54.41 O
ATOM 20 N1 G A 945 61.323 64.009 115.755 1.00 51.38 N
ATOM 21 C2 G A 945 61.123 62.660 115.666 1.00 50.89 C
ATOM 22 N2 G A 945 61.814 62.022 114.715 1.00 49.49 N
ATOM 23 N3 G A 945 60.304 61.988 116.450 1.00 51.57 N
ATOM 24 C4 G A 945 59.691 62.792 117.346 1.00 51.36 C
ATOM 25 P C A 946 60.264 59.619 122.642 1.00 58.07 P
ATOM 26 OP1 C A 946 60.129 58.638 123.744 1.00 58.30 O
ATOM 27 OP2 C A 946 60.509 61.051 122.957 1.00 56.67 O
ATOM 28 O5' C A 946 61.438 59.156 121.678 1.00 59.39 O
TER
ATOM 1 O3' G B 947 64.691 53.069 120.207 1.00 85.78 O
ATOM 2 P A B 948 63.222 52.517 119.821 1.00 82.89 P
ATOM 3 OP1 A B 948 62.205 53.397 120.450 1.00 83.26 O
ATOM 4 OP2 A B 948 63.179 51.059 120.085 1.00 83.92 O
ATOM 5 O5' A B 948 63.139 52.699 118.242 1.00 78.02 O
ATOM 6 C5' A B 948 63.737 51.737 117.353 1.00 69.50 C
ATOM 7 C4' A B 948 64.066 52.381 116.027 1.00 64.24 C
ATOM 8 O4' A B 948 62.847 52.874 115.409 1.00 62.69 O
ATOM 9 C3' A B 948 64.970 53.598 116.102 1.00 60.42 C
ATOM 10 O3' A B 948 66.335 53.211 116.180 1.00 57.61 O
ATOM 11 C2' A B 948 64.622 54.331 114.816 1.00 60.83 C
ATOM 12 O2' A B 948 65.240 53.758 113.683 1.00 59.43 O
ATOM 13 C1' A B 948 63.109 54.097 114.742 1.00 62.00 C
ATOM 14 N9 A B 948 62.314 55.148 115.390 1.00 63.40 N
ATOM 15 C8 A B 948 61.479 55.023 116.478 1.00 62.97 C
ATOM 16 N7 A B 948 60.913 56.147 116.843 1.00 62.54 N
ATOM 17 C5 A B 948 61.402 57.078 115.936 1.00 62.04 C
ATOM 18 C6 A B 948 61.182 58.456 115.786 1.00 61.18 C
ATOM 19 N6 A B 948 60.388 59.173 116.578 1.00 60.93 N
ATOM 20 N1 A B 948 61.816 59.084 114.779 1.00 62.28 N
ATOM 21 C2 A B 948 62.613 58.370 113.979 1.00 62.94 C
ATOM 22 N3 A B 948 62.903 57.075 114.016 1.00 62.65 N
ATOM 23 C4 A B 948 62.259 56.476 115.032 1.00 62.89 C
ATOM 24 P C B 949 67.457 54.302 116.538 1.00 55.82 P
ATOM 25 OP1 C B 949 68.610 53.619 117.169 1.00 56.01 O
ATOM 26 OP2 C B 949 66.802 55.429 117.240 1.00 56.81 O
ATOM 27 O5' C B 949 67.951 54.791 115.111 1.00 56.27 O
TER
Atoms:
OP1: (55.258,63.168,123.545)
OP2: (56.326,64.896,121.985)
C3': (58.598,60.447,120.789)
C1': (58.314,61.033,118.528)
C5': (56.218,61.127,121.422)
O6: (60.948,66.061,116.652)
O4': (57.053,61.099,119.169)
C8: (58.418,63.531,118.981)
C2: (61.123,62.660,115.666)
C6: (60.700,64.854,116.665)
C5: (59.823,64.150,117.512)
C4: (59.691,62.792,117.346)
P: (55.678,63.577,122.182)
C4': (57.120,60.421,120.448)
C2': (59.240,60.218,119.430)
O2': (59.197,58.866,119.037)
N1: (61.323,64.009,115.755)
N2: (61.814,62.022,114.715)
N3: (60.304,61.988,116.450)
N7: (59.015,64.605,118.544)
N9: (58.784,62.395,118.298)
O5': (56.659,62.474,121.600)
O3': (58.939,59.448,121.744)
OP2: (56.326,64.896,121.985)
C3': (58.598,60.447,120.789)
C1': (58.314,61.033,118.528)
C5': (56.218,61.127,121.422)
O6: (60.948,66.061,116.652)
O4': (57.053,61.099,119.169)
C8: (58.418,63.531,118.981)
C2: (61.123,62.660,115.666)
C6: (60.700,64.854,116.665)
C5: (59.823,64.150,117.512)
C4: (59.691,62.792,117.346)
P: (55.678,63.577,122.182)
C4': (57.120,60.421,120.448)
C2': (59.240,60.218,119.430)
O2': (59.197,58.866,119.037)
N1: (61.323,64.009,115.755)
N2: (61.814,62.022,114.715)
N3: (60.304,61.988,116.450)
N7: (59.015,64.605,118.544)
N9: (58.784,62.395,118.298)
O5': (56.659,62.474,121.600)
O3': (58.939,59.448,121.744)
OP1: (62.205,53.397,120.450)
OP2: (63.179,51.059,120.085)
C3': (64.970,53.598,116.102)
C1': (63.109,54.097,114.742)
C5': (63.737,51.737,117.353)
O4': (62.847,52.874,115.409)
C8: (61.479,55.023,116.478)
O2': (65.240,53.758,113.683)
C6: (61.182,58.456,115.786)
C5: (61.402,57.078,115.936)
C4: (62.259,56.476,115.032)
P: (63.222,52.517,119.821)
C4': (64.066,52.381,116.027)
C2': (64.622,54.331,114.816)
C2: (62.613,58.370,113.979)
N1: (61.816,59.084,114.779)
N3: (62.903,57.075,114.016)
N6: (60.388,59.173,116.578)
N7: (60.913,56.147,116.843)
N9: (62.314,55.148,115.390)
O5': (63.139,52.699,118.242)
O3': (66.335,53.211,116.180)
OP2: (63.179,51.059,120.085)
C3': (64.970,53.598,116.102)
C1': (63.109,54.097,114.742)
C5': (63.737,51.737,117.353)
O4': (62.847,52.874,115.409)
C8: (61.479,55.023,116.478)
O2': (65.240,53.758,113.683)
C6: (61.182,58.456,115.786)
C5: (61.402,57.078,115.936)
C4: (62.259,56.476,115.032)
P: (63.222,52.517,119.821)
C4': (64.066,52.381,116.027)
C2': (64.622,54.331,114.816)
C2: (62.613,58.370,113.979)
N1: (61.816,59.084,114.779)
N3: (62.903,57.075,114.016)
N6: (60.388,59.173,116.578)
N7: (60.913,56.147,116.843)
N9: (62.314,55.148,115.390)
O5': (63.139,52.699,118.242)
O3': (66.335,53.211,116.180)
Image (generated by PyMOL):