ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A1951:A1924

Extra

PDB:
ATOM 1 O3' U A1950 106.655 109.595 111.658 1.00 80.33 O
ATOM 2 P G A1951 105.046 109.509 111.673 1.00 78.96 P
ATOM 3 OP1 G A1951 104.581 108.792 112.884 1.00 79.83 O
ATOM 4 OP2 G A1951 104.628 109.030 110.327 1.00 78.73 O
ATOM 5 O5' G A1951 104.564 111.009 111.878 1.00 74.12 O
ATOM 6 C5' G A1951 105.348 112.101 111.399 1.00 65.67 C
ATOM 7 C4' G A1951 104.672 112.765 110.211 1.00 59.88 C
ATOM 8 O4' G A1951 105.606 113.729 109.689 1.00 56.95 O
ATOM 9 C3' G A1951 104.367 111.822 109.054 1.00 57.26 C
ATOM 10 O3' G A1951 103.305 112.402 108.280 1.00 54.06 O
ATOM 11 C2' G A1951 105.676 111.838 108.267 1.00 56.56 C
ATOM 12 O2' G A1951 105.597 111.559 106.890 1.00 57.48 O
ATOM 13 C1' G A1951 106.187 113.250 108.513 1.00 55.61 C
ATOM 14 N9 G A1951 107.632 113.345 108.662 1.00 53.80 N
ATOM 15 C8 G A1951 108.489 112.445 109.246 1.00 54.43 C
ATOM 16 N7 G A1951 109.736 112.822 109.203 1.00 53.20 N
ATOM 17 C5 G A1951 109.689 114.046 108.557 1.00 52.70 C
ATOM 18 C6 G A1951 110.721 114.937 108.214 1.00 53.10 C
ATOM 19 O6 G A1951 111.928 114.816 108.419 1.00 53.37 O
ATOM 20 N1 G A1951 110.229 116.064 107.555 1.00 52.23 N
ATOM 21 C2 G A1951 108.910 116.288 107.264 1.00 52.11 C
ATOM 22 N2 G A1951 108.623 117.408 106.604 1.00 52.54 N
ATOM 23 N3 G A1951 107.939 115.465 107.590 1.00 52.55 N
ATOM 24 C4 G A1951 108.396 114.374 108.223 1.00 52.70 C
ATOM 25 P C A1952 101.767 112.168 108.689 1.00 54.40 P
ATOM 26 OP1 C A1952 101.114 113.223 107.882 1.00 52.88 O
ATOM 27 OP2 C A1952 101.569 112.147 110.160 1.00 53.63 O
ATOM 28 O5' C A1952 101.379 110.709 108.144 1.00 57.14 O
TER

ATOM 1 O3' U B1923 100.256 121.299 112.346 1.00 45.73 O
ATOM 2 P A B1924 99.845 122.746 111.744 1.00 47.30 P
ATOM 3 OP1 A B1924 100.161 123.815 112.732 1.00 47.56 O
ATOM 4 OP2 A B1924 98.450 122.575 111.287 1.00 47.38 O
ATOM 5 O5' A B1924 100.764 122.922 110.458 1.00 45.06 O
ATOM 6 C5' A B1924 101.823 123.886 110.442 1.00 45.84 C
ATOM 7 C4' A B1924 102.362 124.066 109.033 1.00 47.53 C
ATOM 8 O4' A B1924 103.166 122.917 108.637 1.00 46.75 O
ATOM 9 C3' A B1924 101.328 124.292 107.923 1.00 48.29 C
ATOM 10 O3' A B1924 101.816 125.264 106.981 1.00 49.17 O
ATOM 11 C2' A B1924 101.273 122.925 107.246 1.00 48.30 C
ATOM 12 O2' A B1924 100.958 122.934 105.871 1.00 50.12 O
ATOM 13 C1' A B1924 102.715 122.452 107.398 1.00 46.69 C
ATOM 14 N9 A B1924 102.892 121.008 107.333 1.00 45.10 N
ATOM 15 C8 A B1924 101.978 120.020 107.615 1.00 44.76 C
ATOM 16 N7 A B1924 102.411 118.811 107.361 1.00 44.91 N
ATOM 17 C5 A B1924 103.707 119.014 106.897 1.00 45.15 C
ATOM 18 C6 A B1924 104.706 118.127 106.442 1.00 44.91 C
ATOM 19 N6 A B1924 104.533 116.802 106.329 1.00 44.12 N
ATOM 20 N1 A B1924 105.899 118.660 106.089 1.00 44.45 N
ATOM 21 C2 A B1924 106.060 119.984 106.165 1.00 43.18 C
ATOM 22 N3 A B1924 105.196 120.919 106.547 1.00 43.30 N
ATOM 23 C4 A B1924 104.025 120.363 106.906 1.00 44.80 C
ATOM 24 P G B1925 101.198 126.757 106.946 1.00 48.79 P
ATOM 25 OP1 G B1925 102.258 127.588 106.343 1.00 50.46 O
ATOM 26 OP2 G B1925 100.615 127.157 108.253 1.00 47.00 O
ATOM 27 O5' G B1925 100.008 126.673 105.899 1.00 49.12 O
TER

Atoms:
OP1: (104.581,108.792,112.884)
OP2: (104.628,109.030,110.327)
C3': (104.367,111.822,109.054)
C1': (106.187,113.250,108.513)
C5': (105.348,112.101,111.399)
O6: (111.928,114.816,108.419)
O4': (105.606,113.729,109.689)
C8: (108.489,112.445,109.246)
C2: (108.910,116.288,107.264)
C6: (110.721,114.937,108.214)
C5: (109.689,114.046,108.557)
C4: (108.396,114.374,108.223)
P: (105.046,109.509,111.673)
C4': (104.672,112.765,110.211)
C2': (105.676,111.838,108.267)
O2': (105.597,111.559,106.890)
N1: (110.229,116.064,107.555)
N2: (108.623,117.408,106.604)
N3: (107.939,115.465,107.590)
N7: (109.736,112.822,109.203)
N9: (107.632,113.345,108.662)
O5': (104.564,111.009,111.878)
O3': (103.305,112.402,108.280)
OP1: (100.161,123.815,112.732)
OP2: (98.450,122.575,111.287)
C3': (101.328,124.292,107.923)
C1': (102.715,122.452,107.398)
C5': (101.823,123.886,110.442)
O4': (103.166,122.917,108.637)
C8: (101.978,120.020,107.615)
O2': (100.958,122.934,105.871)
C6: (104.706,118.127,106.442)
C5: (103.707,119.014,106.897)
C4: (104.025,120.363,106.906)
P: (99.845,122.746,111.744)
C4': (102.362,124.066,109.033)
C2': (101.273,122.925,107.246)
C2: (106.060,119.984,106.165)
N1: (105.899,118.660,106.089)
N3: (105.196,120.919,106.547)
N6: (104.533,116.802,106.329)
N7: (102.411,118.811,107.361)
N9: (102.892,121.008,107.333)
O5': (100.764,122.922,110.458)
O3': (101.816,125.264,106.981)
Image (generated by PyMOL):
PyMOL image
show in jmol