ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:02016:0617

Extra

PDB:
ATOM 1 O3' U A2015 42.283 107.553 109.955 1.00 35.96 O
ATOM 2 P G A2016 43.502 106.823 109.204 1.00 36.20 P
ATOM 3 OP1 G A2016 43.106 105.401 109.016 1.00 35.61 O
ATOM 4 OP2 G A2016 44.763 107.141 109.919 1.00 40.52 O
ATOM 5 O5' G A2016 43.539 107.515 107.762 1.00 38.66 O
ATOM 6 C5' G A2016 42.434 107.390 106.845 1.00 35.53 C
ATOM 7 C4' G A2016 42.563 108.401 105.722 1.00 37.16 C
ATOM 8 O4' G A2016 42.480 109.748 106.254 1.00 37.53 O
ATOM 9 C3' G A2016 43.882 108.371 104.974 1.00 36.10 C
ATOM 10 O3' G A2016 43.840 107.337 103.993 1.00 36.98 O
ATOM 11 C2' G A2016 43.960 109.782 104.390 1.00 35.28 C
ATOM 12 O2' G A2016 43.200 109.987 103.222 1.00 34.31 O
ATOM 13 C1' G A2016 43.314 110.614 105.501 1.00 34.73 C
ATOM 14 N9 G A2016 44.298 111.222 106.393 1.00 34.71 N
ATOM 15 C8 G A2016 44.859 110.665 107.518 1.00 32.58 C
ATOM 16 N7 G A2016 45.763 111.426 108.068 1.00 33.13 N
ATOM 17 C5 G A2016 45.792 112.560 107.272 1.00 34.24 C
ATOM 18 C6 G A2016 46.589 113.725 107.365 1.00 34.66 C
ATOM 19 O6 G A2016 47.463 113.993 108.194 1.00 36.69 O
ATOM 20 N1 G A2016 46.291 114.631 106.351 1.00 34.06 N
ATOM 21 C2 G A2016 45.348 114.437 105.373 1.00 34.16 C
ATOM 22 N2 G A2016 45.198 115.426 104.484 1.00 31.46 N
ATOM 23 N3 G A2016 44.604 113.353 105.274 1.00 33.38 N
ATOM 24 C4 G A2016 44.878 112.460 106.245 1.00 33.79 C
ATOM 25 P C A2017 45.094 106.340 103.808 1.00 39.66 P
ATOM 26 OP1 C A2017 44.623 105.316 102.847 1.00 36.78 O
ATOM 27 OP2 C A2017 45.623 105.903 105.132 1.00 38.99 O
ATOM 28 O5' C A2017 46.195 107.258 103.105 1.00 40.15 O
TER

ATOM 1 P A B 617 39.287 111.745 95.569 1.00 32.92 P
ATOM 2 OP1 A B 617 39.117 110.557 96.434 1.00 33.60 O
ATOM 3 OP2 A B 617 38.582 111.797 94.264 1.00 33.82 O
ATOM 4 O5' A B 617 38.916 113.051 96.414 1.00 33.56 O
ATOM 5 C5' A B 617 38.416 114.254 95.780 1.00 31.75 C
ATOM 6 C4' A B 617 39.019 115.491 96.427 1.00 33.43 C
ATOM 7 O4' A B 617 38.708 115.493 97.849 1.00 35.95 O
ATOM 8 C3' A B 617 40.537 115.632 96.369 1.00 34.90 C
ATOM 9 O3' A B 617 40.969 116.263 95.163 1.00 34.50 O
ATOM 10 C2' A B 617 40.832 116.533 97.564 1.00 34.99 C
ATOM 11 O2' A B 617 40.597 117.900 97.295 1.00 33.95 O
ATOM 12 C1' A B 617 39.797 116.047 98.581 1.00 36.14 C
ATOM 13 N9 A B 617 40.325 115.029 99.497 1.00 35.66 N
ATOM 14 C8 A B 617 39.917 113.721 99.623 1.00 36.22 C
ATOM 15 N7 A B 617 40.577 113.047 100.533 1.00 38.00 N
ATOM 16 C5 A B 617 41.480 113.968 101.044 1.00 36.88 C
ATOM 17 C6 A B 617 42.463 113.871 102.044 1.00 37.37 C
ATOM 18 N6 A B 617 42.694 112.763 102.753 1.00 36.72 N
ATOM 19 N1 A B 617 43.204 114.967 102.301 1.00 36.03 N
ATOM 20 C2 A B 617 42.950 116.086 101.613 1.00 35.78 C
ATOM 21 N3 A B 617 42.048 116.306 100.663 1.00 35.18 N
ATOM 22 C4 A B 617 41.338 115.193 100.416 1.00 35.46 C
ATOM 23 P A B 618 42.311 115.769 94.422 1.00 36.76 P
ATOM 24 OP1 A B 618 42.345 116.551 93.165 1.00 40.59 O
ATOM 25 OP2 A B 618 42.372 114.293 94.361 1.00 37.95 O
ATOM 26 O5' A B 618 43.547 116.162 95.357 1.00 40.01 O
TER

Atoms:
OP1: (43.106,105.401,109.016)
OP2: (44.763,107.141,109.919)
C3': (43.882,108.371,104.974)
C1': (43.314,110.614,105.501)
C5': (42.434,107.390,106.845)
O6: (47.463,113.993,108.194)
O4': (42.480,109.748,106.254)
C8: (44.859,110.665,107.518)
C2: (45.348,114.437,105.373)
C6: (46.589,113.725,107.365)
C5: (45.792,112.560,107.272)
C4: (44.878,112.460,106.245)
P: (43.502,106.823,109.204)
C4': (42.563,108.401,105.722)
C2': (43.960,109.782,104.390)
O2': (43.200,109.987,103.222)
N1: (46.291,114.631,106.351)
N2: (45.198,115.426,104.484)
N3: (44.604,113.353,105.274)
N7: (45.763,111.426,108.068)
N9: (44.298,111.222,106.393)
O5': (43.539,107.515,107.762)
O3': (43.840,107.337,103.993)
OP1: (39.117,110.557,96.434)
OP2: (38.582,111.797,94.264)
C3': (40.537,115.632,96.369)
C1': (39.797,116.047,98.581)
C5': (38.416,114.254,95.780)
O4': (38.708,115.493,97.849)
C8: (39.917,113.721,99.623)
O2': (40.597,117.900,97.295)
C6: (42.463,113.871,102.044)
C5: (41.480,113.968,101.044)
C4: (41.338,115.193,100.416)
P: (39.287,111.745,95.569)
C4': (39.019,115.491,96.427)
C2': (40.832,116.533,97.564)
C2: (42.950,116.086,101.613)
N1: (43.204,114.967,102.301)
N3: (42.048,116.306,100.663)
N6: (42.694,112.763,102.753)
N7: (40.577,113.047,100.533)
N9: (40.325,115.029,99.497)
O5': (38.916,113.051,96.414)
O3': (40.969,116.263,95.163)
Image (generated by PyMOL):
PyMOL image
show in jmol