Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:02016:0617
Extra
PDB:
ATOM 1 O3' U A2015 42.398 108.563 109.878 1.00 34.26 O
ATOM 2 P G A2016 43.616 107.870 109.084 1.00 34.34 P
ATOM 3 OP1 G A2016 43.265 106.433 108.961 1.00 35.95 O
ATOM 4 OP2 G A2016 44.899 108.257 109.720 1.00 35.36 O
ATOM 5 O5' G A2016 43.588 108.540 107.638 1.00 33.04 O
ATOM 6 C5' G A2016 42.476 108.363 106.740 1.00 29.79 C
ATOM 7 C4' G A2016 42.577 109.353 105.604 1.00 31.97 C
ATOM 8 O4' G A2016 42.534 110.706 106.142 1.00 33.28 O
ATOM 9 C3' G A2016 43.891 109.303 104.843 1.00 31.14 C
ATOM 10 O3' G A2016 43.882 108.270 103.867 1.00 31.29 O
ATOM 11 C2' G A2016 43.997 110.707 104.261 1.00 31.33 C
ATOM 12 O2' G A2016 43.216 110.922 103.111 1.00 32.02 O
ATOM 13 C1' G A2016 43.398 111.546 105.390 1.00 33.34 C
ATOM 14 N9 G A2016 44.407 112.126 106.277 1.00 34.48 N
ATOM 15 C8 G A2016 44.983 111.550 107.385 1.00 34.84 C
ATOM 16 N7 G A2016 45.875 112.318 107.956 1.00 34.85 N
ATOM 17 C5 G A2016 45.889 113.469 107.180 1.00 34.35 C
ATOM 18 C6 G A2016 46.671 114.642 107.296 1.00 35.48 C
ATOM 19 O6 G A2016 47.555 114.902 108.125 1.00 38.05 O
ATOM 20 N1 G A2016 46.353 115.566 106.305 1.00 34.61 N
ATOM 21 C2 G A2016 45.414 115.380 105.322 1.00 32.95 C
ATOM 22 N2 G A2016 45.239 116.392 104.464 1.00 32.36 N
ATOM 23 N3 G A2016 44.698 114.285 105.191 1.00 32.40 N
ATOM 24 C4 G A2016 44.982 113.375 106.147 1.00 34.24 C
ATOM 25 P C A2017 45.154 107.290 103.722 1.00 33.52 P
ATOM 26 OP1 C A2017 44.744 106.210 102.804 1.00 31.36 O
ATOM 27 OP2 C A2017 45.680 106.935 105.077 1.00 33.15 O
ATOM 28 O5' C A2017 46.244 108.195 102.988 1.00 32.46 O
TER
ATOM 1 P A B 617 39.454 112.664 95.464 1.00 35.48 P
ATOM 2 OP1 A B 617 39.249 111.518 96.372 1.00 33.23 O
ATOM 3 OP2 A B 617 38.751 112.685 94.161 1.00 35.38 O
ATOM 4 O5' A B 617 39.142 114.015 96.262 1.00 34.00 O
ATOM 5 C5' A B 617 38.651 115.198 95.590 1.00 33.29 C
ATOM 6 C4' A B 617 39.170 116.449 96.272 1.00 34.92 C
ATOM 7 O4' A B 617 38.816 116.402 97.677 1.00 35.76 O
ATOM 8 C3' A B 617 40.682 116.633 96.279 1.00 35.06 C
ATOM 9 O3' A B 617 41.131 117.294 95.111 1.00 34.10 O
ATOM 10 C2' A B 617 40.900 117.526 97.486 1.00 35.21 C
ATOM 11 O2' A B 617 40.597 118.872 97.191 1.00 37.48 O
ATOM 12 C1' A B 617 39.858 116.974 98.457 1.00 36.04 C
ATOM 13 N9 A B 617 40.386 115.944 99.356 1.00 35.67 N
ATOM 14 C8 A B 617 40.011 114.626 99.431 1.00 36.58 C
ATOM 15 N7 A B 617 40.639 113.948 100.356 1.00 35.42 N
ATOM 16 C5 A B 617 41.490 114.879 100.931 1.00 34.93 C
ATOM 17 C6 A B 617 42.418 114.787 101.981 1.00 34.61 C
ATOM 18 N6 A B 617 42.642 113.668 102.679 1.00 33.70 N
ATOM 19 N1 A B 617 43.112 115.895 102.299 1.00 33.47 N
ATOM 20 C2 A B 617 42.877 117.017 101.612 1.00 34.13 C
ATOM 21 N3 A B 617 42.028 117.232 100.614 1.00 35.33 N
ATOM 22 C4 A B 617 41.355 116.109 100.317 1.00 35.04 C
ATOM 23 P A B 618 42.425 116.757 94.339 1.00 36.07 P
ATOM 24 OP1 A B 618 42.488 117.554 93.090 1.00 34.96 O
ATOM 25 OP2 A B 618 42.339 115.276 94.257 1.00 39.61 O
ATOM 26 O5' A B 618 43.671 117.065 95.295 1.00 36.21 O
TER
ATOM 2 P G A2016 43.616 107.870 109.084 1.00 34.34 P
ATOM 3 OP1 G A2016 43.265 106.433 108.961 1.00 35.95 O
ATOM 4 OP2 G A2016 44.899 108.257 109.720 1.00 35.36 O
ATOM 5 O5' G A2016 43.588 108.540 107.638 1.00 33.04 O
ATOM 6 C5' G A2016 42.476 108.363 106.740 1.00 29.79 C
ATOM 7 C4' G A2016 42.577 109.353 105.604 1.00 31.97 C
ATOM 8 O4' G A2016 42.534 110.706 106.142 1.00 33.28 O
ATOM 9 C3' G A2016 43.891 109.303 104.843 1.00 31.14 C
ATOM 10 O3' G A2016 43.882 108.270 103.867 1.00 31.29 O
ATOM 11 C2' G A2016 43.997 110.707 104.261 1.00 31.33 C
ATOM 12 O2' G A2016 43.216 110.922 103.111 1.00 32.02 O
ATOM 13 C1' G A2016 43.398 111.546 105.390 1.00 33.34 C
ATOM 14 N9 G A2016 44.407 112.126 106.277 1.00 34.48 N
ATOM 15 C8 G A2016 44.983 111.550 107.385 1.00 34.84 C
ATOM 16 N7 G A2016 45.875 112.318 107.956 1.00 34.85 N
ATOM 17 C5 G A2016 45.889 113.469 107.180 1.00 34.35 C
ATOM 18 C6 G A2016 46.671 114.642 107.296 1.00 35.48 C
ATOM 19 O6 G A2016 47.555 114.902 108.125 1.00 38.05 O
ATOM 20 N1 G A2016 46.353 115.566 106.305 1.00 34.61 N
ATOM 21 C2 G A2016 45.414 115.380 105.322 1.00 32.95 C
ATOM 22 N2 G A2016 45.239 116.392 104.464 1.00 32.36 N
ATOM 23 N3 G A2016 44.698 114.285 105.191 1.00 32.40 N
ATOM 24 C4 G A2016 44.982 113.375 106.147 1.00 34.24 C
ATOM 25 P C A2017 45.154 107.290 103.722 1.00 33.52 P
ATOM 26 OP1 C A2017 44.744 106.210 102.804 1.00 31.36 O
ATOM 27 OP2 C A2017 45.680 106.935 105.077 1.00 33.15 O
ATOM 28 O5' C A2017 46.244 108.195 102.988 1.00 32.46 O
TER
ATOM 1 P A B 617 39.454 112.664 95.464 1.00 35.48 P
ATOM 2 OP1 A B 617 39.249 111.518 96.372 1.00 33.23 O
ATOM 3 OP2 A B 617 38.751 112.685 94.161 1.00 35.38 O
ATOM 4 O5' A B 617 39.142 114.015 96.262 1.00 34.00 O
ATOM 5 C5' A B 617 38.651 115.198 95.590 1.00 33.29 C
ATOM 6 C4' A B 617 39.170 116.449 96.272 1.00 34.92 C
ATOM 7 O4' A B 617 38.816 116.402 97.677 1.00 35.76 O
ATOM 8 C3' A B 617 40.682 116.633 96.279 1.00 35.06 C
ATOM 9 O3' A B 617 41.131 117.294 95.111 1.00 34.10 O
ATOM 10 C2' A B 617 40.900 117.526 97.486 1.00 35.21 C
ATOM 11 O2' A B 617 40.597 118.872 97.191 1.00 37.48 O
ATOM 12 C1' A B 617 39.858 116.974 98.457 1.00 36.04 C
ATOM 13 N9 A B 617 40.386 115.944 99.356 1.00 35.67 N
ATOM 14 C8 A B 617 40.011 114.626 99.431 1.00 36.58 C
ATOM 15 N7 A B 617 40.639 113.948 100.356 1.00 35.42 N
ATOM 16 C5 A B 617 41.490 114.879 100.931 1.00 34.93 C
ATOM 17 C6 A B 617 42.418 114.787 101.981 1.00 34.61 C
ATOM 18 N6 A B 617 42.642 113.668 102.679 1.00 33.70 N
ATOM 19 N1 A B 617 43.112 115.895 102.299 1.00 33.47 N
ATOM 20 C2 A B 617 42.877 117.017 101.612 1.00 34.13 C
ATOM 21 N3 A B 617 42.028 117.232 100.614 1.00 35.33 N
ATOM 22 C4 A B 617 41.355 116.109 100.317 1.00 35.04 C
ATOM 23 P A B 618 42.425 116.757 94.339 1.00 36.07 P
ATOM 24 OP1 A B 618 42.488 117.554 93.090 1.00 34.96 O
ATOM 25 OP2 A B 618 42.339 115.276 94.257 1.00 39.61 O
ATOM 26 O5' A B 618 43.671 117.065 95.295 1.00 36.21 O
TER
Atoms:
OP1: (43.265,106.433,108.961)
OP2: (44.899,108.257,109.720)
C3': (43.891,109.303,104.843)
C1': (43.398,111.546,105.390)
C5': (42.476,108.363,106.740)
O6: (47.555,114.902,108.125)
O4': (42.534,110.706,106.142)
C8: (44.983,111.550,107.385)
C2: (45.414,115.380,105.322)
C6: (46.671,114.642,107.296)
C5: (45.889,113.469,107.180)
C4: (44.982,113.375,106.147)
P: (43.616,107.870,109.084)
C4': (42.577,109.353,105.604)
C2': (43.997,110.707,104.261)
O2': (43.216,110.922,103.111)
N1: (46.353,115.566,106.305)
N2: (45.239,116.392,104.464)
N3: (44.698,114.285,105.191)
N7: (45.875,112.318,107.956)
N9: (44.407,112.126,106.277)
O5': (43.588,108.540,107.638)
O3': (43.882,108.270,103.867)
OP2: (44.899,108.257,109.720)
C3': (43.891,109.303,104.843)
C1': (43.398,111.546,105.390)
C5': (42.476,108.363,106.740)
O6: (47.555,114.902,108.125)
O4': (42.534,110.706,106.142)
C8: (44.983,111.550,107.385)
C2: (45.414,115.380,105.322)
C6: (46.671,114.642,107.296)
C5: (45.889,113.469,107.180)
C4: (44.982,113.375,106.147)
P: (43.616,107.870,109.084)
C4': (42.577,109.353,105.604)
C2': (43.997,110.707,104.261)
O2': (43.216,110.922,103.111)
N1: (46.353,115.566,106.305)
N2: (45.239,116.392,104.464)
N3: (44.698,114.285,105.191)
N7: (45.875,112.318,107.956)
N9: (44.407,112.126,106.277)
O5': (43.588,108.540,107.638)
O3': (43.882,108.270,103.867)
OP1: (39.249,111.518,96.372)
OP2: (38.751,112.685,94.161)
C3': (40.682,116.633,96.279)
C1': (39.858,116.974,98.457)
C5': (38.651,115.198,95.590)
O4': (38.816,116.402,97.677)
C8: (40.011,114.626,99.431)
O2': (40.597,118.872,97.191)
C6: (42.418,114.787,101.981)
C5: (41.490,114.879,100.931)
C4: (41.355,116.109,100.317)
P: (39.454,112.664,95.464)
C4': (39.170,116.449,96.272)
C2': (40.900,117.526,97.486)
C2: (42.877,117.017,101.612)
N1: (43.112,115.895,102.299)
N3: (42.028,117.232,100.614)
N6: (42.642,113.668,102.679)
N7: (40.639,113.948,100.356)
N9: (40.386,115.944,99.356)
O5': (39.142,114.015,96.262)
O3': (41.131,117.294,95.111)
OP2: (38.751,112.685,94.161)
C3': (40.682,116.633,96.279)
C1': (39.858,116.974,98.457)
C5': (38.651,115.198,95.590)
O4': (38.816,116.402,97.677)
C8: (40.011,114.626,99.431)
O2': (40.597,118.872,97.191)
C6: (42.418,114.787,101.981)
C5: (41.490,114.879,100.931)
C4: (41.355,116.109,100.317)
P: (39.454,112.664,95.464)
C4': (39.170,116.449,96.272)
C2': (40.900,117.526,97.486)
C2: (42.877,117.017,101.612)
N1: (43.112,115.895,102.299)
N3: (42.028,117.232,100.614)
N6: (42.642,113.668,102.679)
N7: (40.639,113.948,100.356)
N9: (40.386,115.944,99.356)
O5': (39.142,114.015,96.262)
O3': (41.131,117.294,95.111)
Image (generated by PyMOL):