Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:G8:G11
Extra
PDB:
ATOM 1 O3' C A 7 41.023 -38.820 -12.974 1.00 43.09 O
ATOM 2 P G A 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 3 OP1 G A 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 4 OP2 G A 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 5 O5' G A 8 41.133 -36.823 -14.452 1.00 46.52 O
ATOM 6 C5' G A 8 40.750 -37.373 -15.698 1.00 47.18 C
ATOM 7 C4' G A 8 39.672 -36.492 -16.251 1.00 48.10 C
ATOM 8 O4' G A 8 38.649 -36.381 -15.232 1.00 47.82 O
ATOM 9 C3' G A 8 40.093 -35.057 -16.487 1.00 49.31 C
ATOM 10 O3' G A 8 40.634 -34.787 -17.770 1.00 51.41 O
ATOM 11 C2' G A 8 38.757 -34.363 -16.388 1.00 49.21 C
ATOM 12 O2' G A 8 38.027 -34.540 -17.580 1.00 49.58 O
ATOM 13 C1' G A 8 38.106 -35.083 -15.230 1.00 47.54 C
ATOM 14 N9 G A 8 38.315 -34.454 -13.935 1.00 46.26 N
ATOM 15 C8 G A 8 39.285 -34.690 -12.997 1.00 45.76 C
ATOM 16 N7 G A 8 39.168 -33.955 -11.926 1.00 44.71 N
ATOM 17 C5 G A 8 38.036 -33.192 -12.170 1.00 45.87 C
ATOM 18 C6 G A 8 37.375 -32.212 -11.405 1.00 46.40 C
ATOM 19 O6 G A 8 37.636 -31.765 -10.303 1.00 48.49 O
ATOM 20 N1 G A 8 36.268 -31.682 -12.017 1.00 46.26 N
ATOM 21 C2 G A 8 35.826 -32.036 -13.237 1.00 45.90 C
ATOM 22 N2 G A 8 34.732 -31.387 -13.641 1.00 46.20 N
ATOM 23 N3 G A 8 36.414 -32.953 -13.985 1.00 46.00 N
ATOM 24 C4 G A 8 37.509 -33.486 -13.395 1.00 46.26 C
ATOM 25 P U A 9 42.040 -34.046 -17.891 1.00 52.91 P
ATOM 26 OP1 U A 9 42.756 -34.630 -19.025 1.00 54.48 O
ATOM 27 OP2 U A 9 42.716 -34.070 -16.585 1.00 54.30 O
ATOM 28 O5' U A 9 41.704 -32.545 -18.202 1.00 56.47 O
TER
ATOM 1 O3' G B 10 34.868 -26.333 -19.631 1.00 61.29 O
ATOM 2 P A B 11 33.340 -26.202 -20.104 1.00 58.00 P
ATOM 3 OP1 A B 11 33.468 -25.860 -21.527 1.00 59.49 O
ATOM 4 OP2 A B 11 32.554 -25.321 -19.226 1.00 58.99 O
ATOM 5 O5' A B 11 32.736 -27.672 -20.056 1.00 58.07 O
ATOM 6 C5' A B 11 31.344 -27.919 -20.017 1.00 55.89 C
ATOM 7 C4' A B 11 31.019 -29.084 -20.922 1.00 54.21 C
ATOM 8 O4' A B 11 32.245 -29.724 -21.248 1.00 53.61 O
ATOM 9 C3' A B 11 30.188 -30.210 -20.376 1.00 53.18 C
ATOM 10 O3' A B 11 28.865 -29.817 -20.518 1.00 52.26 O
ATOM 11 C2' A B 11 30.543 -31.268 -21.386 1.00 53.43 C
ATOM 12 O2' A B 11 30.040 -30.969 -22.669 1.00 53.25 O
ATOM 13 C1' A B 11 32.036 -31.087 -21.479 1.00 53.54 C
ATOM 14 N9 A B 11 32.927 -31.791 -20.567 1.00 52.85 N
ATOM 15 C8 A B 11 33.780 -32.796 -20.904 1.00 52.10 C
ATOM 16 N7 A B 11 34.502 -33.253 -19.925 1.00 50.76 N
ATOM 17 C5 A B 11 34.113 -32.479 -18.876 1.00 51.70 C
ATOM 18 C6 A B 11 34.527 -32.478 -17.547 1.00 51.60 C
ATOM 19 N6 A B 11 35.439 -33.301 -17.053 1.00 49.68 N
ATOM 20 N1 A B 11 33.950 -31.577 -16.742 1.00 53.19 N
ATOM 21 C2 A B 11 33.016 -30.754 -17.254 1.00 53.90 C
ATOM 22 N3 A B 11 32.541 -30.659 -18.498 1.00 53.09 N
ATOM 23 C4 A B 11 33.146 -31.565 -19.254 1.00 52.53 C
ATOM 24 P G B 12 27.751 -30.063 -19.431 1.00 51.45 P
ATOM 25 OP1 G B 12 26.455 -29.673 -20.011 1.00 54.76 O
ATOM 26 OP2 G B 12 28.144 -29.497 -18.131 1.00 52.69 O
ATOM 27 O5' G B 12 27.777 -31.656 -19.405 1.00 52.93 O
TER
ATOM 2 P G A 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 3 OP1 G A 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 4 OP2 G A 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 5 O5' G A 8 41.133 -36.823 -14.452 1.00 46.52 O
ATOM 6 C5' G A 8 40.750 -37.373 -15.698 1.00 47.18 C
ATOM 7 C4' G A 8 39.672 -36.492 -16.251 1.00 48.10 C
ATOM 8 O4' G A 8 38.649 -36.381 -15.232 1.00 47.82 O
ATOM 9 C3' G A 8 40.093 -35.057 -16.487 1.00 49.31 C
ATOM 10 O3' G A 8 40.634 -34.787 -17.770 1.00 51.41 O
ATOM 11 C2' G A 8 38.757 -34.363 -16.388 1.00 49.21 C
ATOM 12 O2' G A 8 38.027 -34.540 -17.580 1.00 49.58 O
ATOM 13 C1' G A 8 38.106 -35.083 -15.230 1.00 47.54 C
ATOM 14 N9 G A 8 38.315 -34.454 -13.935 1.00 46.26 N
ATOM 15 C8 G A 8 39.285 -34.690 -12.997 1.00 45.76 C
ATOM 16 N7 G A 8 39.168 -33.955 -11.926 1.00 44.71 N
ATOM 17 C5 G A 8 38.036 -33.192 -12.170 1.00 45.87 C
ATOM 18 C6 G A 8 37.375 -32.212 -11.405 1.00 46.40 C
ATOM 19 O6 G A 8 37.636 -31.765 -10.303 1.00 48.49 O
ATOM 20 N1 G A 8 36.268 -31.682 -12.017 1.00 46.26 N
ATOM 21 C2 G A 8 35.826 -32.036 -13.237 1.00 45.90 C
ATOM 22 N2 G A 8 34.732 -31.387 -13.641 1.00 46.20 N
ATOM 23 N3 G A 8 36.414 -32.953 -13.985 1.00 46.00 N
ATOM 24 C4 G A 8 37.509 -33.486 -13.395 1.00 46.26 C
ATOM 25 P U A 9 42.040 -34.046 -17.891 1.00 52.91 P
ATOM 26 OP1 U A 9 42.756 -34.630 -19.025 1.00 54.48 O
ATOM 27 OP2 U A 9 42.716 -34.070 -16.585 1.00 54.30 O
ATOM 28 O5' U A 9 41.704 -32.545 -18.202 1.00 56.47 O
TER
ATOM 1 O3' G B 10 34.868 -26.333 -19.631 1.00 61.29 O
ATOM 2 P A B 11 33.340 -26.202 -20.104 1.00 58.00 P
ATOM 3 OP1 A B 11 33.468 -25.860 -21.527 1.00 59.49 O
ATOM 4 OP2 A B 11 32.554 -25.321 -19.226 1.00 58.99 O
ATOM 5 O5' A B 11 32.736 -27.672 -20.056 1.00 58.07 O
ATOM 6 C5' A B 11 31.344 -27.919 -20.017 1.00 55.89 C
ATOM 7 C4' A B 11 31.019 -29.084 -20.922 1.00 54.21 C
ATOM 8 O4' A B 11 32.245 -29.724 -21.248 1.00 53.61 O
ATOM 9 C3' A B 11 30.188 -30.210 -20.376 1.00 53.18 C
ATOM 10 O3' A B 11 28.865 -29.817 -20.518 1.00 52.26 O
ATOM 11 C2' A B 11 30.543 -31.268 -21.386 1.00 53.43 C
ATOM 12 O2' A B 11 30.040 -30.969 -22.669 1.00 53.25 O
ATOM 13 C1' A B 11 32.036 -31.087 -21.479 1.00 53.54 C
ATOM 14 N9 A B 11 32.927 -31.791 -20.567 1.00 52.85 N
ATOM 15 C8 A B 11 33.780 -32.796 -20.904 1.00 52.10 C
ATOM 16 N7 A B 11 34.502 -33.253 -19.925 1.00 50.76 N
ATOM 17 C5 A B 11 34.113 -32.479 -18.876 1.00 51.70 C
ATOM 18 C6 A B 11 34.527 -32.478 -17.547 1.00 51.60 C
ATOM 19 N6 A B 11 35.439 -33.301 -17.053 1.00 49.68 N
ATOM 20 N1 A B 11 33.950 -31.577 -16.742 1.00 53.19 N
ATOM 21 C2 A B 11 33.016 -30.754 -17.254 1.00 53.90 C
ATOM 22 N3 A B 11 32.541 -30.659 -18.498 1.00 53.09 N
ATOM 23 C4 A B 11 33.146 -31.565 -19.254 1.00 52.53 C
ATOM 24 P G B 12 27.751 -30.063 -19.431 1.00 51.45 P
ATOM 25 OP1 G B 12 26.455 -29.673 -20.011 1.00 54.76 O
ATOM 26 OP2 G B 12 28.144 -29.497 -18.131 1.00 52.69 O
ATOM 27 O5' G B 12 27.777 -31.656 -19.405 1.00 52.93 O
TER
Atoms:
OP1: (43.192,-38.199,-14.060)
OP2: (42.253,-36.793,-12.201)
C3': (40.093,-35.057,-16.487)
C1': (38.106,-35.083,-15.230)
C5': (40.750,-37.373,-15.698)
O6: (37.636,-31.765,-10.303)
O4': (38.649,-36.381,-15.232)
C8: (39.285,-34.690,-12.997)
C2: (35.826,-32.036,-13.237)
C6: (37.375,-32.212,-11.405)
C5: (38.036,-33.192,-12.170)
C4: (37.509,-33.486,-13.395)
P: (42.009,-37.640,-13.387)
C4': (39.672,-36.492,-16.251)
C2': (38.757,-34.363,-16.388)
O2': (38.027,-34.540,-17.580)
N1: (36.268,-31.682,-12.017)
N2: (34.732,-31.387,-13.641)
N3: (36.414,-32.953,-13.985)
N7: (39.168,-33.955,-11.926)
N9: (38.315,-34.454,-13.935)
O5': (41.133,-36.823,-14.452)
O3': (40.634,-34.787,-17.770)
OP2: (42.253,-36.793,-12.201)
C3': (40.093,-35.057,-16.487)
C1': (38.106,-35.083,-15.230)
C5': (40.750,-37.373,-15.698)
O6: (37.636,-31.765,-10.303)
O4': (38.649,-36.381,-15.232)
C8: (39.285,-34.690,-12.997)
C2: (35.826,-32.036,-13.237)
C6: (37.375,-32.212,-11.405)
C5: (38.036,-33.192,-12.170)
C4: (37.509,-33.486,-13.395)
P: (42.009,-37.640,-13.387)
C4': (39.672,-36.492,-16.251)
C2': (38.757,-34.363,-16.388)
O2': (38.027,-34.540,-17.580)
N1: (36.268,-31.682,-12.017)
N2: (34.732,-31.387,-13.641)
N3: (36.414,-32.953,-13.985)
N7: (39.168,-33.955,-11.926)
N9: (38.315,-34.454,-13.935)
O5': (41.133,-36.823,-14.452)
O3': (40.634,-34.787,-17.770)
OP1: (33.468,-25.860,-21.527)
OP2: (32.554,-25.321,-19.226)
C3': (30.188,-30.210,-20.376)
C1': (32.036,-31.087,-21.479)
C5': (31.344,-27.919,-20.017)
O4': (32.245,-29.724,-21.248)
C8: (33.780,-32.796,-20.904)
O2': (30.040,-30.969,-22.669)
C6: (34.527,-32.478,-17.547)
C5: (34.113,-32.479,-18.876)
C4: (33.146,-31.565,-19.254)
P: (33.340,-26.202,-20.104)
C4': (31.019,-29.084,-20.922)
C2': (30.543,-31.268,-21.386)
C2: (33.016,-30.754,-17.254)
N1: (33.950,-31.577,-16.742)
N3: (32.541,-30.659,-18.498)
N6: (35.439,-33.301,-17.053)
N7: (34.502,-33.253,-19.925)
N9: (32.927,-31.791,-20.567)
O5': (32.736,-27.672,-20.056)
O3': (28.865,-29.817,-20.518)
OP2: (32.554,-25.321,-19.226)
C3': (30.188,-30.210,-20.376)
C1': (32.036,-31.087,-21.479)
C5': (31.344,-27.919,-20.017)
O4': (32.245,-29.724,-21.248)
C8: (33.780,-32.796,-20.904)
O2': (30.040,-30.969,-22.669)
C6: (34.527,-32.478,-17.547)
C5: (34.113,-32.479,-18.876)
C4: (33.146,-31.565,-19.254)
P: (33.340,-26.202,-20.104)
C4': (31.019,-29.084,-20.922)
C2': (30.543,-31.268,-21.386)
C2: (33.016,-30.754,-17.254)
N1: (33.950,-31.577,-16.742)
N3: (32.541,-30.659,-18.498)
N6: (35.439,-33.301,-17.053)
N7: (34.502,-33.253,-19.925)
N9: (32.927,-31.791,-20.567)
O5': (32.736,-27.672,-20.056)
O3': (28.865,-29.817,-20.518)
Image (generated by PyMOL):