Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01077:01078
Extra
PDB:
ATOM 1 O3' A A1076 36.480 105.554 144.542 1.00 47.02 O
ATOM 2 P A A1077 37.971 105.964 144.983 1.00 50.94 P
ATOM 3 OP1 A A1077 38.400 105.064 146.081 1.00 50.11 O
ATOM 4 OP2 A A1077 37.997 107.444 145.186 1.00 47.71 O
ATOM 5 O5' A A1077 38.848 105.613 143.701 1.00 49.12 O
ATOM 6 C5' A A1077 38.699 106.371 142.496 1.00 48.06 C
ATOM 7 C4' A A1077 39.482 105.747 141.367 1.00 46.46 C
ATOM 8 O4' A A1077 38.936 104.431 141.032 1.00 45.64 O
ATOM 9 C3' A A1077 39.373 106.538 140.071 1.00 44.78 C
ATOM 10 O3' A A1077 40.208 107.667 139.971 1.00 43.93 O
ATOM 11 C2' A A1077 39.523 105.463 139.013 1.00 45.39 C
ATOM 12 O2' A A1077 40.862 105.071 138.813 1.00 43.84 O
ATOM 13 C1' A A1077 38.646 104.375 139.641 1.00 46.34 C
ATOM 14 N9 A A1077 37.237 104.749 139.478 1.00 49.05 N
ATOM 15 C8 A A1077 36.723 106.033 139.412 1.00 50.92 C
ATOM 16 N7 A A1077 35.431 106.086 139.250 1.00 50.98 N
ATOM 17 C5 A A1077 35.057 104.759 139.217 1.00 51.23 C
ATOM 18 C6 A A1077 33.820 104.167 139.071 1.00 51.84 C
ATOM 19 N6 A A1077 32.699 104.864 138.931 1.00 49.85 N
ATOM 20 N1 A A1077 33.766 102.820 139.070 1.00 55.36 N
ATOM 21 C2 A A1077 34.916 102.131 139.209 1.00 55.87 C
ATOM 22 N3 A A1077 36.159 102.582 139.361 1.00 52.23 N
ATOM 23 C4 A A1077 36.160 103.921 139.356 1.00 50.36 C
ATOM 24 P G A1078 39.540 109.106 139.718 1.00 43.44 P
ATOM 25 OP1 G A1078 40.646 110.066 139.457 1.00 44.90 O
ATOM 26 OP2 G A1078 38.557 109.391 140.798 1.00 43.13 O
ATOM 27 O5' G A1078 38.779 108.910 138.338 1.00 42.75 O
TER
ATOM 1 O3' A B1077 40.208 107.667 139.971 1.00 43.93 O
ATOM 2 P G B1078 39.540 109.106 139.718 1.00 43.44 P
ATOM 3 OP1 G B1078 40.646 110.066 139.457 1.00 44.90 O
ATOM 4 OP2 G B1078 38.557 109.391 140.798 1.00 43.13 O
ATOM 5 O5' G B1078 38.779 108.910 138.338 1.00 42.75 O
ATOM 6 C5' G B1078 37.366 109.037 138.235 1.00 41.61 C
ATOM 7 C4' G B1078 36.916 108.438 136.937 1.00 40.84 C
ATOM 8 O4' G B1078 35.466 108.477 136.842 1.00 40.70 O
ATOM 9 C3' G B1078 37.438 109.159 135.702 1.00 40.62 C
ATOM 10 O3' G B1078 37.642 108.183 134.680 1.00 42.17 O
ATOM 11 C2' G B1078 36.278 110.094 135.365 1.00 38.23 C
ATOM 12 O2' G B1078 36.245 110.517 134.021 1.00 38.45 O
ATOM 13 C1' G B1078 35.097 109.185 135.680 1.00 38.37 C
ATOM 14 N9 G B1078 33.791 109.794 135.900 1.00 37.41 N
ATOM 15 C8 G B1078 33.493 111.105 136.178 1.00 39.21 C
ATOM 16 N7 G B1078 32.210 111.323 136.290 1.00 39.03 N
ATOM 17 C5 G B1078 31.631 110.076 136.082 1.00 36.13 C
ATOM 18 C6 G B1078 30.276 109.681 136.071 1.00 34.31 C
ATOM 19 O6 G B1078 29.275 110.371 136.231 1.00 37.82 O
ATOM 20 N1 G B1078 30.141 108.328 135.834 1.00 32.48 N
ATOM 21 C2 G B1078 31.170 107.463 135.624 1.00 33.57 C
ATOM 22 N2 G B1078 30.844 106.200 135.422 1.00 29.41 N
ATOM 23 N3 G B1078 32.433 107.813 135.615 1.00 36.49 N
ATOM 24 C4 G B1078 32.592 109.127 135.850 1.00 36.79 C
ATOM 25 P U B1079 39.088 108.022 134.000 1.00 43.65 P
ATOM 26 OP1 U B1079 39.893 109.221 134.357 1.00 42.95 O
ATOM 27 OP2 U B1079 38.885 107.673 132.574 1.00 43.09 O
ATOM 28 O5' U B1079 39.754 106.752 134.691 1.00 41.50 O
TER
ATOM 2 P A A1077 37.971 105.964 144.983 1.00 50.94 P
ATOM 3 OP1 A A1077 38.400 105.064 146.081 1.00 50.11 O
ATOM 4 OP2 A A1077 37.997 107.444 145.186 1.00 47.71 O
ATOM 5 O5' A A1077 38.848 105.613 143.701 1.00 49.12 O
ATOM 6 C5' A A1077 38.699 106.371 142.496 1.00 48.06 C
ATOM 7 C4' A A1077 39.482 105.747 141.367 1.00 46.46 C
ATOM 8 O4' A A1077 38.936 104.431 141.032 1.00 45.64 O
ATOM 9 C3' A A1077 39.373 106.538 140.071 1.00 44.78 C
ATOM 10 O3' A A1077 40.208 107.667 139.971 1.00 43.93 O
ATOM 11 C2' A A1077 39.523 105.463 139.013 1.00 45.39 C
ATOM 12 O2' A A1077 40.862 105.071 138.813 1.00 43.84 O
ATOM 13 C1' A A1077 38.646 104.375 139.641 1.00 46.34 C
ATOM 14 N9 A A1077 37.237 104.749 139.478 1.00 49.05 N
ATOM 15 C8 A A1077 36.723 106.033 139.412 1.00 50.92 C
ATOM 16 N7 A A1077 35.431 106.086 139.250 1.00 50.98 N
ATOM 17 C5 A A1077 35.057 104.759 139.217 1.00 51.23 C
ATOM 18 C6 A A1077 33.820 104.167 139.071 1.00 51.84 C
ATOM 19 N6 A A1077 32.699 104.864 138.931 1.00 49.85 N
ATOM 20 N1 A A1077 33.766 102.820 139.070 1.00 55.36 N
ATOM 21 C2 A A1077 34.916 102.131 139.209 1.00 55.87 C
ATOM 22 N3 A A1077 36.159 102.582 139.361 1.00 52.23 N
ATOM 23 C4 A A1077 36.160 103.921 139.356 1.00 50.36 C
ATOM 24 P G A1078 39.540 109.106 139.718 1.00 43.44 P
ATOM 25 OP1 G A1078 40.646 110.066 139.457 1.00 44.90 O
ATOM 26 OP2 G A1078 38.557 109.391 140.798 1.00 43.13 O
ATOM 27 O5' G A1078 38.779 108.910 138.338 1.00 42.75 O
TER
ATOM 1 O3' A B1077 40.208 107.667 139.971 1.00 43.93 O
ATOM 2 P G B1078 39.540 109.106 139.718 1.00 43.44 P
ATOM 3 OP1 G B1078 40.646 110.066 139.457 1.00 44.90 O
ATOM 4 OP2 G B1078 38.557 109.391 140.798 1.00 43.13 O
ATOM 5 O5' G B1078 38.779 108.910 138.338 1.00 42.75 O
ATOM 6 C5' G B1078 37.366 109.037 138.235 1.00 41.61 C
ATOM 7 C4' G B1078 36.916 108.438 136.937 1.00 40.84 C
ATOM 8 O4' G B1078 35.466 108.477 136.842 1.00 40.70 O
ATOM 9 C3' G B1078 37.438 109.159 135.702 1.00 40.62 C
ATOM 10 O3' G B1078 37.642 108.183 134.680 1.00 42.17 O
ATOM 11 C2' G B1078 36.278 110.094 135.365 1.00 38.23 C
ATOM 12 O2' G B1078 36.245 110.517 134.021 1.00 38.45 O
ATOM 13 C1' G B1078 35.097 109.185 135.680 1.00 38.37 C
ATOM 14 N9 G B1078 33.791 109.794 135.900 1.00 37.41 N
ATOM 15 C8 G B1078 33.493 111.105 136.178 1.00 39.21 C
ATOM 16 N7 G B1078 32.210 111.323 136.290 1.00 39.03 N
ATOM 17 C5 G B1078 31.631 110.076 136.082 1.00 36.13 C
ATOM 18 C6 G B1078 30.276 109.681 136.071 1.00 34.31 C
ATOM 19 O6 G B1078 29.275 110.371 136.231 1.00 37.82 O
ATOM 20 N1 G B1078 30.141 108.328 135.834 1.00 32.48 N
ATOM 21 C2 G B1078 31.170 107.463 135.624 1.00 33.57 C
ATOM 22 N2 G B1078 30.844 106.200 135.422 1.00 29.41 N
ATOM 23 N3 G B1078 32.433 107.813 135.615 1.00 36.49 N
ATOM 24 C4 G B1078 32.592 109.127 135.850 1.00 36.79 C
ATOM 25 P U B1079 39.088 108.022 134.000 1.00 43.65 P
ATOM 26 OP1 U B1079 39.893 109.221 134.357 1.00 42.95 O
ATOM 27 OP2 U B1079 38.885 107.673 132.574 1.00 43.09 O
ATOM 28 O5' U B1079 39.754 106.752 134.691 1.00 41.50 O
TER
Atoms:
OP1: (38.400,105.064,146.081)
OP2: (37.997,107.444,145.186)
C3': (39.373,106.538,140.071)
C1': (38.646,104.375,139.641)
C5': (38.699,106.371,142.496)
O4': (38.936,104.431,141.032)
C8: (36.723,106.033,139.412)
O2': (40.862,105.071,138.813)
C6: (33.820,104.167,139.071)
C5: (35.057,104.759,139.217)
C4: (36.160,103.921,139.356)
P: (37.971,105.964,144.983)
C4': (39.482,105.747,141.367)
C2': (39.523,105.463,139.013)
C2: (34.916,102.131,139.209)
N1: (33.766,102.820,139.070)
N3: (36.159,102.582,139.361)
N6: (32.699,104.864,138.931)
N7: (35.431,106.086,139.250)
N9: (37.237,104.749,139.478)
O5': (38.848,105.613,143.701)
O3': (40.208,107.667,139.971)
OP2: (37.997,107.444,145.186)
C3': (39.373,106.538,140.071)
C1': (38.646,104.375,139.641)
C5': (38.699,106.371,142.496)
O4': (38.936,104.431,141.032)
C8: (36.723,106.033,139.412)
O2': (40.862,105.071,138.813)
C6: (33.820,104.167,139.071)
C5: (35.057,104.759,139.217)
C4: (36.160,103.921,139.356)
P: (37.971,105.964,144.983)
C4': (39.482,105.747,141.367)
C2': (39.523,105.463,139.013)
C2: (34.916,102.131,139.209)
N1: (33.766,102.820,139.070)
N3: (36.159,102.582,139.361)
N6: (32.699,104.864,138.931)
N7: (35.431,106.086,139.250)
N9: (37.237,104.749,139.478)
O5': (38.848,105.613,143.701)
O3': (40.208,107.667,139.971)
OP1: (40.646,110.066,139.457)
OP2: (38.557,109.391,140.798)
C3': (37.438,109.159,135.702)
C1': (35.097,109.185,135.680)
C5': (37.366,109.037,138.235)
O6: (29.275,110.371,136.231)
O4': (35.466,108.477,136.842)
C8: (33.493,111.105,136.178)
C2: (31.170,107.463,135.624)
C6: (30.276,109.681,136.071)
C5: (31.631,110.076,136.082)
C4: (32.592,109.127,135.850)
P: (39.540,109.106,139.718)
C4': (36.916,108.438,136.937)
C2': (36.278,110.094,135.365)
O2': (36.245,110.517,134.021)
N1: (30.141,108.328,135.834)
N2: (30.844,106.200,135.422)
N3: (32.433,107.813,135.615)
N7: (32.210,111.323,136.290)
N9: (33.791,109.794,135.900)
O5': (38.779,108.910,138.338)
O3': (37.642,108.183,134.680)
OP2: (38.557,109.391,140.798)
C3': (37.438,109.159,135.702)
C1': (35.097,109.185,135.680)
C5': (37.366,109.037,138.235)
O6: (29.275,110.371,136.231)
O4': (35.466,108.477,136.842)
C8: (33.493,111.105,136.178)
C2: (31.170,107.463,135.624)
C6: (30.276,109.681,136.071)
C5: (31.631,110.076,136.082)
C4: (32.592,109.127,135.850)
P: (39.540,109.106,139.718)
C4': (36.916,108.438,136.937)
C2': (36.278,110.094,135.365)
O2': (36.245,110.517,134.021)
N1: (30.141,108.328,135.834)
N2: (30.844,106.200,135.422)
N3: (32.433,107.813,135.615)
N7: (32.210,111.323,136.290)
N9: (33.791,109.794,135.900)
O5': (38.779,108.910,138.338)
O3': (37.642,108.183,134.680)
Image (generated by PyMOL):