ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A440:A448

Extra

PDB:
ATOM 1 O3' C A 439 36.247 126.214 55.359 1.00 21.24 O
ATOM 2 P G A 440 34.818 126.699 55.877 1.00 23.60 P
ATOM 3 OP1 G A 440 34.812 126.573 57.355 1.00 24.56 O
ATOM 4 OP2 G A 440 33.807 125.976 55.075 1.00 23.53 O
ATOM 5 O5' G A 440 34.796 128.251 55.532 1.00 21.54 O
ATOM 6 C5' G A 440 35.820 129.122 56.040 1.00 22.25 C
ATOM 7 C4' G A 440 35.625 130.521 55.523 1.00 23.05 C
ATOM 8 O4' G A 440 35.771 130.499 54.079 1.00 25.61 O
ATOM 9 C3' G A 440 34.271 131.151 55.815 1.00 23.24 C
ATOM 10 O3' G A 440 34.419 132.522 56.079 1.00 21.98 O
ATOM 11 C2' G A 440 33.509 130.968 54.510 1.00 26.15 C
ATOM 12 O2' G A 440 32.566 132.001 54.280 1.00 27.52 O
ATOM 13 C1' G A 440 34.625 131.063 53.477 1.00 26.83 C
ATOM 14 N9 G A 440 34.340 130.298 52.272 1.00 29.53 N
ATOM 15 C8 G A 440 34.066 128.954 52.181 1.00 29.87 C
ATOM 16 N7 G A 440 33.877 128.553 50.954 1.00 30.35 N
ATOM 17 C5 G A 440 34.022 129.709 50.196 1.00 30.52 C
ATOM 18 C6 G A 440 33.919 129.910 48.802 1.00 30.44 C
ATOM 19 O6 G A 440 33.645 129.087 47.925 1.00 33.05 O
ATOM 20 N1 G A 440 34.164 131.234 48.457 1.00 29.48 N
ATOM 21 C2 G A 440 34.457 132.242 49.346 1.00 30.11 C
ATOM 22 N2 G A 440 34.676 133.459 48.824 1.00 30.77 N
ATOM 23 N3 G A 440 34.534 132.070 50.652 1.00 30.76 N
ATOM 24 C4 G A 440 34.311 130.789 51.001 1.00 30.24 C
ATOM 25 P A A 441 34.265 133.038 57.578 1.00 23.82 P
ATOM 26 OP1 A A 441 34.306 131.851 58.470 1.00 22.71 O
ATOM 27 OP2 A A 441 33.102 133.936 57.632 1.00 23.80 O
ATOM 28 O5' A A 441 35.582 133.904 57.808 1.00 24.44 O
TER

ATOM 1 O3' A B 447 45.515 138.748 53.119 1.00 25.79 O
ATOM 2 P A B 448 44.057 138.069 53.007 1.00 27.26 P
ATOM 3 OP1 A B 448 43.329 138.217 54.288 1.00 25.49 O
ATOM 4 OP2 A B 448 44.222 136.719 52.408 1.00 25.42 O
ATOM 5 O5' A B 448 43.287 139.019 51.997 1.00 24.82 O
ATOM 6 C5' A B 448 43.738 139.187 50.658 1.00 25.44 C
ATOM 7 C4' A B 448 42.588 139.611 49.801 1.00 27.63 C
ATOM 8 O4' A B 448 41.644 138.517 49.698 1.00 27.78 O
ATOM 9 C3' A B 448 41.791 140.821 50.281 1.00 27.57 C
ATOM 10 O3' A B 448 41.373 141.495 49.111 1.00 28.57 O
ATOM 11 C2' A B 448 40.587 140.190 50.968 1.00 27.46 C
ATOM 12 O2' A B 448 39.408 140.965 50.892 1.00 27.51 O
ATOM 13 C1' A B 448 40.364 138.964 50.098 1.00 28.90 C
ATOM 14 N9 A B 448 39.719 137.887 50.833 1.00 30.73 N
ATOM 15 C8 A B 448 40.062 137.343 52.042 1.00 30.78 C
ATOM 16 N7 A B 448 39.322 136.322 52.381 1.00 32.32 N
ATOM 17 C5 A B 448 38.422 136.201 51.332 1.00 32.28 C
ATOM 18 C6 A B 448 37.396 135.295 51.073 1.00 32.09 C
ATOM 19 N6 A B 448 37.108 134.266 51.868 1.00 34.69 N
ATOM 20 N1 A B 448 36.674 135.469 49.951 1.00 31.39 N
ATOM 21 C2 A B 448 36.988 136.479 49.141 1.00 33.18 C
ATOM 22 N3 A B 448 37.947 137.384 49.264 1.00 33.69 N
ATOM 23 C4 A B 448 38.636 137.181 50.394 1.00 32.09 C
ATOM 24 P C B 449 42.280 142.670 48.528 1.00 28.21 P
ATOM 25 OP1 C B 449 41.619 143.239 47.348 1.00 29.34 O
ATOM 26 OP2 C B 449 43.687 142.193 48.429 1.00 25.29 O
ATOM 27 O5' C B 449 42.187 143.747 49.678 1.00 27.62 O
TER

Atoms:
OP1: (34.812,126.573,57.355)
OP2: (33.807,125.976,55.075)
C3': (34.271,131.151,55.815)
C1': (34.625,131.063,53.477)
C5': (35.820,129.122,56.040)
O6: (33.645,129.087,47.925)
O4': (35.771,130.499,54.079)
C8: (34.066,128.954,52.181)
C2: (34.457,132.242,49.346)
C6: (33.919,129.910,48.802)
C5: (34.022,129.709,50.196)
C4: (34.311,130.789,51.001)
P: (34.818,126.699,55.877)
C4': (35.625,130.521,55.523)
C2': (33.509,130.968,54.510)
O2': (32.566,132.001,54.280)
N1: (34.164,131.234,48.457)
N2: (34.676,133.459,48.824)
N3: (34.534,132.070,50.652)
N7: (33.877,128.553,50.954)
N9: (34.340,130.298,52.272)
O5': (34.796,128.251,55.532)
O3': (34.419,132.522,56.079)
OP1: (43.329,138.217,54.288)
OP2: (44.222,136.719,52.408)
C3': (41.791,140.821,50.281)
C1': (40.364,138.964,50.098)
C5': (43.738,139.187,50.658)
O4': (41.644,138.517,49.698)
C8: (40.062,137.343,52.042)
O2': (39.408,140.965,50.892)
C6: (37.396,135.295,51.073)
C5: (38.422,136.201,51.332)
C4: (38.636,137.181,50.394)
P: (44.057,138.069,53.007)
C4': (42.588,139.611,49.801)
C2': (40.587,140.190,50.968)
C2: (36.988,136.479,49.141)
N1: (36.674,135.469,49.951)
N3: (37.947,137.384,49.264)
N6: (37.108,134.266,51.868)
N7: (39.322,136.322,52.381)
N9: (39.719,137.887,50.833)
O5': (43.287,139.019,51.997)
O3': (41.373,141.495,49.111)
Image (generated by PyMOL):
PyMOL image
show in jmol