Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02016:0617
Extra
PDB:
ATOM 1 O3' U A2015 42.340 107.991 109.963 1.00 26.64 O
ATOM 2 P G A2016 43.538 107.246 109.184 1.00 28.12 P
ATOM 3 OP1 G A2016 43.132 105.824 109.017 1.00 28.34 O
ATOM 4 OP2 G A2016 44.834 107.551 109.848 1.00 27.21 O
ATOM 5 O5' G A2016 43.554 107.947 107.749 1.00 28.00 O
ATOM 6 C5' G A2016 42.467 107.795 106.824 1.00 25.50 C
ATOM 7 C4' G A2016 42.607 108.786 105.686 1.00 25.59 C
ATOM 8 O4' G A2016 42.531 110.139 106.205 1.00 26.72 O
ATOM 9 C3' G A2016 43.931 108.748 104.944 1.00 26.25 C
ATOM 10 O3' G A2016 43.919 107.711 103.969 1.00 26.75 O
ATOM 11 C2' G A2016 44.009 110.149 104.340 1.00 25.46 C
ATOM 12 O2' G A2016 43.236 110.328 103.178 1.00 25.85 O
ATOM 13 C1' G A2016 43.377 110.993 105.448 1.00 26.01 C
ATOM 14 N9 G A2016 44.371 111.590 106.338 1.00 26.99 N
ATOM 15 C8 G A2016 44.928 111.028 107.463 1.00 25.67 C
ATOM 16 N7 G A2016 45.828 111.788 108.023 1.00 25.95 N
ATOM 17 C5 G A2016 45.865 112.924 107.227 1.00 25.71 C
ATOM 18 C6 G A2016 46.667 114.094 107.327 1.00 26.03 C
ATOM 19 O6 G A2016 47.545 114.355 108.157 1.00 28.53 O
ATOM 20 N1 G A2016 46.369 115.006 106.320 1.00 23.02 N
ATOM 21 C2 G A2016 45.431 114.812 105.335 1.00 23.47 C
ATOM 22 N2 G A2016 45.281 115.806 104.452 1.00 23.09 N
ATOM 23 N3 G A2016 44.692 113.723 105.223 1.00 23.44 N
ATOM 24 C4 G A2016 44.958 112.827 106.194 1.00 24.85 C
ATOM 25 P C A2017 45.187 106.735 103.812 1.00 29.06 P
ATOM 26 OP1 C A2017 44.758 105.636 102.914 1.00 25.75 O
ATOM 27 OP2 C A2017 45.746 106.396 105.158 1.00 31.63 O
ATOM 28 O5' C A2017 46.263 107.638 103.056 1.00 29.49 O
TER
ATOM 1 P A B 617 39.462 112.133 95.501 1.00 25.16 P
ATOM 2 OP1 A B 617 39.240 110.977 96.400 1.00 23.46 O
ATOM 3 OP2 A B 617 38.797 112.154 94.170 1.00 27.27 O
ATOM 4 O5' A B 617 39.113 113.461 96.315 1.00 23.50 O
ATOM 5 C5' A B 617 38.606 114.643 95.659 1.00 24.31 C
ATOM 6 C4' A B 617 39.150 115.892 96.327 1.00 24.34 C
ATOM 7 O4' A B 617 38.818 115.858 97.741 1.00 25.86 O
ATOM 8 C3' A B 617 40.665 116.068 96.301 1.00 26.07 C
ATOM 9 O3' A B 617 41.093 116.724 95.111 1.00 26.59 O
ATOM 10 C2' A B 617 40.907 116.970 97.502 1.00 25.12 C
ATOM 11 O2' A B 617 40.615 118.319 97.203 1.00 25.92 O
ATOM 12 C1' A B 617 39.875 116.437 98.498 1.00 26.36 C
ATOM 13 N9 A B 617 40.410 115.420 99.410 1.00 26.52 N
ATOM 14 C8 A B 617 40.052 114.093 99.496 1.00 28.58 C
ATOM 15 N7 A B 617 40.692 113.432 100.429 1.00 29.40 N
ATOM 16 C5 A B 617 41.527 114.383 100.996 1.00 28.11 C
ATOM 17 C6 A B 617 42.458 114.312 102.043 1.00 29.45 C
ATOM 18 N6 A B 617 42.706 113.200 102.738 1.00 31.67 N
ATOM 19 N1 A B 617 43.134 115.435 102.357 1.00 28.06 N
ATOM 20 C2 A B 617 42.882 116.548 101.660 1.00 28.20 C
ATOM 21 N3 A B 617 42.031 116.742 100.661 1.00 26.56 N
ATOM 22 C4 A B 617 41.373 115.608 100.373 1.00 26.21 C
ATOM 23 P A B 618 42.431 116.252 94.361 1.00 29.33 P
ATOM 24 OP1 A B 618 42.479 117.073 93.133 1.00 30.83 O
ATOM 25 OP2 A B 618 42.454 114.775 94.256 1.00 31.85 O
ATOM 26 O5' A B 618 43.656 116.613 95.321 1.00 29.66 O
TER
ATOM 2 P G A2016 43.538 107.246 109.184 1.00 28.12 P
ATOM 3 OP1 G A2016 43.132 105.824 109.017 1.00 28.34 O
ATOM 4 OP2 G A2016 44.834 107.551 109.848 1.00 27.21 O
ATOM 5 O5' G A2016 43.554 107.947 107.749 1.00 28.00 O
ATOM 6 C5' G A2016 42.467 107.795 106.824 1.00 25.50 C
ATOM 7 C4' G A2016 42.607 108.786 105.686 1.00 25.59 C
ATOM 8 O4' G A2016 42.531 110.139 106.205 1.00 26.72 O
ATOM 9 C3' G A2016 43.931 108.748 104.944 1.00 26.25 C
ATOM 10 O3' G A2016 43.919 107.711 103.969 1.00 26.75 O
ATOM 11 C2' G A2016 44.009 110.149 104.340 1.00 25.46 C
ATOM 12 O2' G A2016 43.236 110.328 103.178 1.00 25.85 O
ATOM 13 C1' G A2016 43.377 110.993 105.448 1.00 26.01 C
ATOM 14 N9 G A2016 44.371 111.590 106.338 1.00 26.99 N
ATOM 15 C8 G A2016 44.928 111.028 107.463 1.00 25.67 C
ATOM 16 N7 G A2016 45.828 111.788 108.023 1.00 25.95 N
ATOM 17 C5 G A2016 45.865 112.924 107.227 1.00 25.71 C
ATOM 18 C6 G A2016 46.667 114.094 107.327 1.00 26.03 C
ATOM 19 O6 G A2016 47.545 114.355 108.157 1.00 28.53 O
ATOM 20 N1 G A2016 46.369 115.006 106.320 1.00 23.02 N
ATOM 21 C2 G A2016 45.431 114.812 105.335 1.00 23.47 C
ATOM 22 N2 G A2016 45.281 115.806 104.452 1.00 23.09 N
ATOM 23 N3 G A2016 44.692 113.723 105.223 1.00 23.44 N
ATOM 24 C4 G A2016 44.958 112.827 106.194 1.00 24.85 C
ATOM 25 P C A2017 45.187 106.735 103.812 1.00 29.06 P
ATOM 26 OP1 C A2017 44.758 105.636 102.914 1.00 25.75 O
ATOM 27 OP2 C A2017 45.746 106.396 105.158 1.00 31.63 O
ATOM 28 O5' C A2017 46.263 107.638 103.056 1.00 29.49 O
TER
ATOM 1 P A B 617 39.462 112.133 95.501 1.00 25.16 P
ATOM 2 OP1 A B 617 39.240 110.977 96.400 1.00 23.46 O
ATOM 3 OP2 A B 617 38.797 112.154 94.170 1.00 27.27 O
ATOM 4 O5' A B 617 39.113 113.461 96.315 1.00 23.50 O
ATOM 5 C5' A B 617 38.606 114.643 95.659 1.00 24.31 C
ATOM 6 C4' A B 617 39.150 115.892 96.327 1.00 24.34 C
ATOM 7 O4' A B 617 38.818 115.858 97.741 1.00 25.86 O
ATOM 8 C3' A B 617 40.665 116.068 96.301 1.00 26.07 C
ATOM 9 O3' A B 617 41.093 116.724 95.111 1.00 26.59 O
ATOM 10 C2' A B 617 40.907 116.970 97.502 1.00 25.12 C
ATOM 11 O2' A B 617 40.615 118.319 97.203 1.00 25.92 O
ATOM 12 C1' A B 617 39.875 116.437 98.498 1.00 26.36 C
ATOM 13 N9 A B 617 40.410 115.420 99.410 1.00 26.52 N
ATOM 14 C8 A B 617 40.052 114.093 99.496 1.00 28.58 C
ATOM 15 N7 A B 617 40.692 113.432 100.429 1.00 29.40 N
ATOM 16 C5 A B 617 41.527 114.383 100.996 1.00 28.11 C
ATOM 17 C6 A B 617 42.458 114.312 102.043 1.00 29.45 C
ATOM 18 N6 A B 617 42.706 113.200 102.738 1.00 31.67 N
ATOM 19 N1 A B 617 43.134 115.435 102.357 1.00 28.06 N
ATOM 20 C2 A B 617 42.882 116.548 101.660 1.00 28.20 C
ATOM 21 N3 A B 617 42.031 116.742 100.661 1.00 26.56 N
ATOM 22 C4 A B 617 41.373 115.608 100.373 1.00 26.21 C
ATOM 23 P A B 618 42.431 116.252 94.361 1.00 29.33 P
ATOM 24 OP1 A B 618 42.479 117.073 93.133 1.00 30.83 O
ATOM 25 OP2 A B 618 42.454 114.775 94.256 1.00 31.85 O
ATOM 26 O5' A B 618 43.656 116.613 95.321 1.00 29.66 O
TER
Atoms:
OP1: (43.132,105.824,109.017)
OP2: (44.834,107.551,109.848)
C3': (43.931,108.748,104.944)
C1': (43.377,110.993,105.448)
C5': (42.467,107.795,106.824)
O6: (47.545,114.355,108.157)
O4': (42.531,110.139,106.205)
C8: (44.928,111.028,107.463)
C2: (45.431,114.812,105.335)
C6: (46.667,114.094,107.327)
C5: (45.865,112.924,107.227)
C4: (44.958,112.827,106.194)
P: (43.538,107.246,109.184)
C4': (42.607,108.786,105.686)
C2': (44.009,110.149,104.340)
O2': (43.236,110.328,103.178)
N1: (46.369,115.006,106.320)
N2: (45.281,115.806,104.452)
N3: (44.692,113.723,105.223)
N7: (45.828,111.788,108.023)
N9: (44.371,111.590,106.338)
O5': (43.554,107.947,107.749)
O3': (43.919,107.711,103.969)
OP2: (44.834,107.551,109.848)
C3': (43.931,108.748,104.944)
C1': (43.377,110.993,105.448)
C5': (42.467,107.795,106.824)
O6: (47.545,114.355,108.157)
O4': (42.531,110.139,106.205)
C8: (44.928,111.028,107.463)
C2: (45.431,114.812,105.335)
C6: (46.667,114.094,107.327)
C5: (45.865,112.924,107.227)
C4: (44.958,112.827,106.194)
P: (43.538,107.246,109.184)
C4': (42.607,108.786,105.686)
C2': (44.009,110.149,104.340)
O2': (43.236,110.328,103.178)
N1: (46.369,115.006,106.320)
N2: (45.281,115.806,104.452)
N3: (44.692,113.723,105.223)
N7: (45.828,111.788,108.023)
N9: (44.371,111.590,106.338)
O5': (43.554,107.947,107.749)
O3': (43.919,107.711,103.969)
OP1: (39.240,110.977,96.400)
OP2: (38.797,112.154,94.170)
C3': (40.665,116.068,96.301)
C1': (39.875,116.437,98.498)
C5': (38.606,114.643,95.659)
O4': (38.818,115.858,97.741)
C8: (40.052,114.093,99.496)
O2': (40.615,118.319,97.203)
C6: (42.458,114.312,102.043)
C5: (41.527,114.383,100.996)
C4: (41.373,115.608,100.373)
P: (39.462,112.133,95.501)
C4': (39.150,115.892,96.327)
C2': (40.907,116.970,97.502)
C2: (42.882,116.548,101.660)
N1: (43.134,115.435,102.357)
N3: (42.031,116.742,100.661)
N6: (42.706,113.200,102.738)
N7: (40.692,113.432,100.429)
N9: (40.410,115.420,99.410)
O5': (39.113,113.461,96.315)
O3': (41.093,116.724,95.111)
OP2: (38.797,112.154,94.170)
C3': (40.665,116.068,96.301)
C1': (39.875,116.437,98.498)
C5': (38.606,114.643,95.659)
O4': (38.818,115.858,97.741)
C8: (40.052,114.093,99.496)
O2': (40.615,118.319,97.203)
C6: (42.458,114.312,102.043)
C5: (41.527,114.383,100.996)
C4: (41.373,115.608,100.373)
P: (39.462,112.133,95.501)
C4': (39.150,115.892,96.327)
C2': (40.907,116.970,97.502)
C2: (42.882,116.548,101.660)
N1: (43.134,115.435,102.357)
N3: (42.031,116.742,100.661)
N6: (42.706,113.200,102.738)
N7: (40.692,113.432,100.429)
N9: (40.410,115.420,99.410)
O5': (39.113,113.461,96.315)
O3': (41.093,116.724,95.111)
Image (generated by PyMOL):